TCONS_00057229-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057229-protein
Unique NameTCONS_00057229-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length107

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057229-protein ID=TCONS_00057229-protein|Name=TCONS_00057229-protein|organism=Clytia hemisphaerica|type=polypeptide|length=107bp
MAALRQGVRRMTTLAGQALKDAVAAEEKHARATSMQWKKISLFIALPGIG
LCAYNAIIDELEHMKHAHPEFVGFEHLRIRKTSFPWGDGNHSLFHGHNNP
LPEGYEH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036053XLOC_036053Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057229TCONS_00057229Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001349Cyt_c_oxidase_su6a
Vocabulary: Cellular Component
TermDefinition
GO:0005743mitochondrial inner membrane
GO:0005751mitochondrial respiratory chain complex IV
Vocabulary: Molecular Function
TermDefinition
GO:0004129cytochrome-c oxidase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0005751 mitochondrial respiratory chain complex IV
molecular_function GO:0004129 cytochrome-c oxidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001349Cytochrome c oxidase, subunit VIaPFAMPF02046COX6Acoord: 15..96
e-value: 9.6E-17
score: 61.4
IPR001349Cytochrome c oxidase, subunit VIaGENE3D4.10.95.10coord: 24..107
e-value: 2.6E-27
score: 94.3
IPR001349Cytochrome c oxidase, subunit VIaPIRSFPIRSF000277COX_VIacoord: 1..107
e-value: 1.1E-28
score: 97.7
IPR001349Cytochrome c oxidase, subunit VIaPRODOMPD006036coord: 37..106
e-value: 1.0E-17
score: 213.0
IPR001349Cytochrome c oxidase, subunit VIaSUPERFAMILY81411Mitochondrial cytochrome c oxidase subunit VIacoord: 24..106

Blast
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BLAST of TCONS_00057229-protein vs. Swiss-Prot (Human)
Match: CX6A1 (Cytochrome c oxidase subunit 6A1, mitochondrial OS=Homo sapiens GN=COX6A1 PE=1 SV=4)

HSP 1 Score: 88.1965 bits (217), Expect = 3.884e-24
Identity = 42/92 (45.65%), Postives = 54/92 (58.70%), Query Frame = 0 
Query:   16 GQALKDAVAAEEKHARATSMQWKKISLFIALPGIGLCAYNAIIDELEHMKHAHPEFVGFEHLRIRKTSFPWGDGNHSLFHG-HNNPLPEGYE 106
            G+ +      EE  AR     WK ++ F+ALPG+ +   N  +    H +H  PEF+ + HLRIR   FPWGDGNH+LFH  H NPLP GYE
Sbjct:   21 GRPMSSGAHGEEGSAR----MWKTLTFFVALPGVAVSMLNVYLKS-HHGEHERPEFIAYPHLRIRTKPFPWGDGNHTLFHNPHVNPLPTGYE 107
The following BLAST results are available for this feature:
BLAST of TCONS_00057229-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CX6A13.884e-2445.65Cytochrome c oxidase subunit 6A1, mitochondrial OS... [more]
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