XLOC_035880 (gene) - C. hemisphaerica

Overview
NameXLOC_035880
Unique NameXLOC_035880
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_284:1346140..1354326-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035880 ID=XLOC_035880|Name=XLOC_035880|organism=Clytia hemisphaerica|type=gene|length=8187bp|location=Sequence derived from alignment at scaffold_284:1346140..1354326- (Clytia hemisphaerica)
CAAAAAGTATGATATGTATCTCTTCACCTTTCATTTTCCTAGATTAGTGA TTCAAACAAAAAAATAAGATGAAAAAGAAAGCGCCGCCAACAACCGATAC CACAAGGAAAATGAACCCTGTGGTCAGTGGTATGATGATGACTGGCACCA TCTTCGGCTCCGCTACAATATTACTCCCTGGGGTTGTGTCCCAAATCAGT ACCACATCATATTTCTTTATTTTGTTCTTCTATGTGGCACTGGCTTATGC ATGTACGATGTTTGCTAATTATGTATTTGGTGATTTGTTAAGCAAAACCC TGGAAAATGACGAATCGTTGCGGAGACCATTACAATATTGTACTGAACGT GCATTTGGAAAGAATTCATGGCTCAATGTACTTTTTACTTGCATTCAAAT CACCAGCAACCTTTCCCTGGTTGTCTCTGCTACAATGATTGTTGCTACCA TTTTAGAATCTGCATTGCCAATCTTGCCATTGAATTTAAATTCATCAAAC TTAACTCGCATTTGGCTACTTATCACATTTTTGGGACTGCTACCAACCCA AATGATCGGTTCTTTCAAAGAATTGGGTTTCGTTGGACCATCAGCTGTTT TTTTCAGTGTGACTGCATTATTCTTGGTTATTGTATCAGGATACATAGTG CAAGCAAATAATATCTTGCCGCCAGACCCTTTAACAAAGAGTGTCTTAGA GAAAGCACTACCGTGGATAGACTACACACCACCATACACATTTTTCTCAG TTTCTGGCACTATATTTTTCTCACTTGCTGGATATATGTTGGTATTACCG AGCCTGGCAGCTATAGATCCAGATACTGGATCTCTTAATAGGACAGTCAC AACATCAGCTGTATGTGTTTATATATTGTACTGTGTAGCAGGCTATGTGA CCTACTTATTATTCAACGATTACGTCATCGAAGTTTCGATTGTTGATACG ATACAAAGGATAGCGAAGGGAGCAGAAAATTCTACTTTGTTGGTATTTGC CAAGATCATTGAAGCTCTTTTGGTGCTCCACTTTGTTTGTGCTATATGTC TTGCTGGTAATCCGGTTTACTTGTACTTGGAATCCGTCTTCACAGTTCCG AATGGTAAGGCTTTATATATTTCTCCTTAAAAATCACTTACTCCTTTGGA GTGGGGAGTTGGTAGAAAGTCGATCATTGATTGATTTTGGGGTCATTTTT ACCAAAACACCCTAGGAAATATAGACTTTGACTTTTTTTAGGAATATGTA GTATGATACGATAGGAAGGGGCTAGTTATGAAATGCTACTTGGGTGATTT TTCAGAAAAGTTGAAAGGTGACCTTCATACAATTGAGTGAGATAGAGTGA TTATCTGAAAATCTCTGTTAAGGGTAAATTTATTGTTCATTCCTCAGCCT CGTTCAACACTTTGTAAAATTCTTGACCCTACCATATGACTTCGAATAAA CGCCCGGGCGTTAAATAAATTTTTAAGATTTTAGGAAGTGCGTTTAATCT AAGGGGCGTTCGAAGTAATACGATATTTGTTAAAATAGACTATTTATTTT CTCATAGAATTTTGTTGGAAGCGGTTTTTACTACGAACTCTCATTTTTGG TGCTTGCACTTTGATTGTCATCATATTTCCAAAACTTTCGCAATTCGTAT CTTGGCTTGGTGGAGGATTTTTGTTCAACCTGGCGACATTCGTTCCAATC ATTTTGTATTTGTGTTTATGTGAAACTTCAATAACGACCAAAGTGTTCTG TTGGTTTTTATTTACTTTATCGCTGGTGATTGCAATTGGAGTGAATTATG TGGGACTGGATGTTCTTTTATAAAAGATCAAACATATTGAAGTTATTTCG AAGCTTGCGTGTCTTTTTAAAGTTTTTAAACTTAGATGTACACTGTATTT ACGAAGTTTGGTGTTGTGAAACCTATCACCAAGTTTCTATATCCAATTTT AAGGGAATCCAAGAATCCAAAATTGTTGTTCAGAAATGCTGCTCACCTTG GAGACCTGCTGCGGTTATGAGTACAAACGGATGTGAAAATCAATCTGTCC CCCGAATTTTCAAGGGTCGACGCACCGGACTCTGCAAGAATTCCAAGGCT TTACCTATTGTCATGCTTTTTTGTCGTAGTTAGATGTTTTTCTTTAGATC GAGAAGTTAATTTTACAATTGAAATAATTTCTAAGTCTTTTGGGTGCGTC TCTTTGTTGGATTGATCTGCAAATAGTCGACTTGGAAGACAAAATTTAAG CAAATGCCTTTTTAAATTTAGCAAAATCTCCTCTCAGTTAATATAATAGC AACGAGGGGTAAATCTCTCGAAAATTTTGTTCGAGATTTGTGAATTATTT TTGATTTATGATTTATTTTTGATTTATTTTTTATATTTTTTATTTTAGTG ATTTACCTCGAATAGCAAGACAATTTTTTGTCAAAAGGCTTGGTTTTATT TTGAGTTTTTGTGGATCGCATTCGCATTCTCAAGTCTGCTCCAAAAAAAA AGGACAGTCCGTAATTTTTGAAAGAAACTTTGAACCCTACAGTATGTGGC CCCCAAAACGTCGATTAAATTTGAAATTTCTCTCAAATCTAGTATTTTTC TAATGGCCCCCAAAACGGAGGTTTGAAATTTTAGCGATTTCTCGAGATAT TTTTAAGATATGAATACAATTTCATTTTTGTCTTTACTGTCTCAAATGAC TTGAAAGAATCAAAGAATTTTATCTCGGACATGGAATGAAGGGAAAACGA TTGATTGCATACGAAATTTTTTGCCAAACGAGACAAAACTATCCACTTGC AACTAATTGTACACCCCTTCTCACAGACCCGATAGCATTTTTTTCTATGC CAGTGGGGGTAAAAATAACAGCCTAAAACTCGATGGGGATTAATATATTC TCATTTTTTTATAGCTGGGGATTCAGTGAGGATGGGAGAAATAGTACAAT GAGCCCCCCCCCCCCCCAAAAAAAAAAAAAAAGCCCCCCCCCCCCCAATT TCCAATTTTCAAAAAAAAAATTTTTTAATTTTTTTATATGAGGGGAATCT GTGACGGCAGGAGAAAAATTACAAATAGCCCCCCCCCCCCCAGTCGACCC TCAATTCACGTATTCACGCACAAAATTTTATCAATTCACGTATTCACGCG CGAAAAAAACCATTTTCACGTTCACGTGCCAATTTTGCTTTTATATTTTT GGTTAAATCGATTGTGACCTTTCTATGGTTTCTTTAGACGGTTTGACCTA TGCTAATGCCAAACATTTTCGCCAATATAAAGTTTTTTGCAGTTTTGTGA CCTTATTATCGATAGCGTCGATCATTTAAGGCATCTTTTACAGCTATTTA AGCTTTAATAGAGCAATGTTTTAGGTCTGCCGCGCAAAAGTTACAAAAAA CTACCCCTCTGGCGTAGGGTGGGCTGTTGTTGTGGGATTTTCTTCCTCGC AGACCCGTAAAAGGTCTTTTTTGATTTTAAATCGAGGTTGGGCTAATCAT GGTTTGAGAAGCCGTAGACTTCAACAAAAACTTCAAAGAGGTGGAGCGGT AGTGTACAACAAGAGGACGCAAATTCCAATGTTTGACACCTGCCTATTTC ATGGGAAAAAAATGTATGTAAAAAAGCAATGCGAGCGCGAAATCTTTCGA CAATTTTCGCTCTTTTATGACTGAAAAAACGACCTTAATACGCTAGTGTT AGTCAAGTCTGCCTTGTTTGGTCACACAATTCTTTGATTTTATTCAACAC TGACCATTTGTTGGCAAAAATCTGAAACAGCAAGCGACGTACCTGCCGTA CCCGGTGCGGTATTCCAAGAGCTTCGCCCAAGAGAAAACTTTTAANAGCG CCGTCCCTGCCGTACCCGGTGCGGTATTCCAAGAGCTTCGCCCAAGAGAA AACTTTTAAAATTTAGAATGCCTAGATTGCTTGAAAAGGCATCATGTGCA TCATTATCTATGAGAATTATTTTTTACTTCTTCGATGCTGCATGCATACG AGATGTTTTAGAACTACCTACTTTTGCAAAGTATTGAAGGAGCAAAAATC TCTCTAAGTTAACGCAGTATCATTTTGTGTATTGTATTGTATAGTAACAA TATAAGTGACTACGGAGAGATGACCATTATTAAACGCTGACAGAGAAAAT TTTCTCTAGACTCTTTTGTTTTGGCTAAAAACGCTCTCGTATTTGCATCA CAAAAATTGACATTAAAAATGAAAAAATACGCCCTCAGAAAAATAATGAA AATATTTGTTTAAGATATCTTTGATGATTTTAATGTTATAAAGTTTTGGT TATTTCGAATGACAATAAGTTAATCCAAGACTATGCAAGCGAGGCGAGCA AGAAATTTTACAGATTTAGGTTTACAGATTTTTAGAGTTTCCTTGTATTT TAGACAATGATTTGCTTTTCACGTTCACGCTAAAAATCTCGATTCACGAA TTCACGGTGGAAAAATCTTATTTTCACGTTCACGCTGATATCTCAATTCA CGTATTCACGCGCTAAAAAAGTCCAATTCACGTACTCACGTCAGAAAAAA GGCTCATTCACGTGTCACGCCAGCCCCTGGGGGAGCCCCTACAATATTGC TTATCTGATTATTTTCAGAGGGTAGATTTTGTAAACACACTCTATCAAAC TTGTGTTTCTATTTGATATCCAATCTCTATTTATTCAGGGTAACGACAGT ATTTTTCAAAGCTTGTTGTTAACATGCTTTTCCAATAGCAACATAGAGAA GAGTCGAGTTATTTTCTTTTGAAAATAGTTTTGTGCAAGAATTTGATCGT GATAAAGTCTTTGGTTTAACTTTCCATCTTTGCTATTTTTCGTGATTTTT GATCGTCTCTAGCCCTACTTTGAGGGAGGAAAGGTGTACTTAGGTAAAAA TGGGTGCTGGGTATGTGCAGACGATAAGAATCGGTTTTTCATCTTCGTAA GTCTCTGCTAAGGGTTACAATCATCAGAAAATTTTAAAGTAGTCCCTCTA AGGCTTAGTCTATCTCTGTCCCAACATGCGATTTTTTATCACCGGTGTCG ATGAATAAAAAGCCATGGTCATCTAGTACAGGCAACCTAAGGGTCGGAAT ATTCGTGATTTTTAGGATTTTTTTTATATATAGAGAAAANGCCATGGTCA TCTAGTACAGGCAACCTAAGGGTCAGAATATTCGTGATTGTTAGGATTTT TTTTTTATATAGAGAGAAAGAATTTGACATTTTTGAGTCCGTTTGAAAGA TTTTTGTCAAAATTTTCGATAAAACGTGACCCTTTGAGAGGGAAATTCTC GATTTTAGTGAGTTTGGGACTTTTTGAAAGATTGACCTCTCGACTCGTAC CCCTTTGAGGGACTTTTGACGTATGAAAAAGGGTACCCTTATGGCTTGCA CATACCTATTTCGCCTAAGTTACTCCCCTGGATTTATATGTAGATAATAG GAAAAAGAAATTCCATTTTATTCCCATTCCAATTATAATAATCTCCAGTG AATTTTTTTTCTTCTAAAACAATTTCACTTGGCCATTTTTTATCAAAAAA TTTGAAAAACCCGTAGGAAAATGAAAGACATGTGCCCAAAATAGGCCAAA ACCCCCAAAAATAATTCCAGTAAAATACGATATAACACGATTTTTTATAT TTTTTTCTTTCGACCGTGAAAATAAGTTCCCGCTAAAATTAGCTTCTTTA AGGTAACAAAAATCCTTCTTACTATATCAGTCGTTTATCTATCGAAACAC TTTACTGATAGATTTAATCATGGTGGACTCAAATCTTTTTATTGTGTGCA GAATACATACATTTATACCTCCATGATAATATCTAGTCGTATGAAACTAA CCACAAATTTAATTTCTTTCTTATCAACAATAAATGCAATAACATTCCTG ATTTTACTTTATAAGTAGTTTGTATTACTGTATGTTGTCTATACTTTAGA TAGAATCATTTTGGTCACGGATGACATTGCGATATGATGTTTGAACGAGA AATGAAAGGCACTAACAACAAACACTATGGATCAAAAGTTAACGGTTGCC CAGACAACATGAATCAAATTGAATTATGGAATAGCAAAAATTTGTAACTA ATTTTAACTCTCTTATGTTAGGGATCTGTTGACTTGATTTAAAGGAGAAT CTTTTTTCATTTCTTTTTTTTAGAGCAAAAGATGAAAAAGAAAGCGCCGC AAACCGCCAGTTCCGCTGTAAAAAAAATGAGCCCTGTGGTCAGCGGTATG ATGATGACTGGCACCATCTTCGGGTCTGCTTCAATTTTACTCCCTGGGGT TGTCTCACAAGTCGGGGTAGGCTCATTCTTTCTGATGCTATTTTTCTATT TGATATTGTCATACGCTTGTACAATGCTTGCAAATTACGTATTTGGTGAT TTGTTAAGCAAAACCCCGGAAAATGACGAATCGTTGCGGAGACCATTACA ATATTGCACTGAACGTGCATTTGGTAAGAAATCATGGCTCAATATGCTTT TTACTTGCATTCAAATATCCAGCAACCTTTCCCTCGTCGTTTCGTGTACC ATGTTTGCTGCTACCATTTTAGAATCTGCATTGCCAATCTTGCCATTGAA TTTAAATTCATCAAACTTAACTCGCATTTGGCTACTTATAACATTTTNAA TCACCAGCAACCTTTCCCTGGTTGTCTCTGCTACAATGATTGTTGCTACC ATTTTAGAATCTGCATTGCCAATCTTGCCATTGAATTTAAATTCATCAAA CTTAACTCGCATTTGGCTACTTATCACATTTTTGGGACTGCTACCAACCC AAATGATCGGTTCTTTCAAAGAATTGGGTTTCGTTGGACCATCAGCTGTT TTTTTCAGTGTGACTGCATTATTCTTGGTTATTGTATCAGGATACATAGT GCAAGCAAATAATATCTTGCCGCCAGACCCTTTAACAAAGAGTGTCTTAG AGAAAGCACTACCGTGGATAGACTACACACCACCATACACATTTTTCTCA GTTTCTGGCACTATATTTTTCTCACTTGCTGGATATATGTTGGTATTACC GAGCCTGGCAGCTATAGATCCAGATACTGAATCTCTTAATAGGACAGTCA CAACATCAGCTATATGTGTTTATATATTATACTGTGCAGCAGGCTATGTG ACCTACTTATTATTCAGTGATTACGTCATCGAAGTTTCGATTGTTGATAC GATACAAAGGATAGCGAAGGGAGCAGAAAATTCTACTTTGTTGGTACTTG CCAAGATCATCGAAGCTCTTTTGGTGCTCCACTTCGTTTGTGCTATATGT CTTGCTGGTAATCCGGTTTACTTGTACTTGGAATCCGTCTTCACAGTTCC GAATGGTATGTTTTTCTCACGATTTCCTGTATTCGCAATCTTCGTTTATT ATTCTTTGTCCTCAAATCTTTTGAAATTAGTATCTTTGTCCACCCTAAAT GGAGTTCAGTGAATTTCTATTTAGTAAAGTTATAAATTGTTCAAAGGTTG TATTTCAAAAGCCGAACATGGGATAATCACGATACCATCGGATTTTAACT TCTTACTTTTATCCTTACTGGTTTAGATTAATGTTATTCTACTAAAACAT TTGTGATCAAAGGTTTTAATATTTTCTCATAGAATTTTGTTGGAAGCGGT TTATACTACGAACTCTCATTTTTGGCGCTTGCAATTTGATTGTCATTGTA TTTCCAAAACTTTCGCAATTCGTATCTTGGCTTGGTGGAGGATTTTTGTT CAATCTGGCGACATTCGTTCCAATCATTTTGTATTTATGTTTATGTGAAA CTTCACTGACGACCAAAGTGTTCTGTTGGTTTTTATTCACTTTATCGCTG GTGATTGCTATCGGAGTGAATTATGTGGGACTGGCTGTTCTTTTATAAAG GAATTATAAAGGAAACTTACAACTTATGAAATCTTTAAACTATTAACTTT TCAAAATAAAGAAAATTTATTCAATTCTTGATTTAAATTTTTAGCTTATC TTCGCTTTATTTGGTTAATTAAAACTGAGTTTTAGTTCTTAGGACTTTAA GTAGCGCTGTACATTCGATTTAGCGATCTTGCTGCCCTTTCATCATTTGA TAATTTAGATATCAAGCCTTTTAAAGATTAATATAAATACATTTCTAGAT AAAGTCTAATTTTTTCGTGTGTAAAAGCATACAGTAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056980TCONS_00056980Clytia hemisphaericatranscript
TCONS_00056979TCONS_00056979Clytia hemisphaericatranscript
TCONS_00056978TCONS_00056978Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056978-proteinTCONS_00056978-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_284supercontigscaffold_284:1346140..1354326 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
96.36 131.97 233.93 241.51 233.77 1823.65 599.49 133.02 94.98 157.69 471.27 128.18 93.44 161.72 152.24 73.51 425.87 115.89 432.18 50.76 79.26 92.32 107.41 87.16 207.19 177.61 142.57 251.73 86.06 116.3