XLOC_035809 (gene) - C. hemisphaerica

Overview
NameXLOC_035809
Unique NameXLOC_035809
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_284:190718..198055+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035809 ID=XLOC_035809|Name=XLOC_035809|organism=Clytia hemisphaerica|type=gene|length=7338bp|location=Sequence derived from alignment at scaffold_284:190718..198055+ (Clytia hemisphaerica)
TTTAGATATGAAAAAGCAatgaaacattaaaaacaaactgataagaagta aataaataaatacacGCTTGGGTTATGGGAATGGATTCTTGAAAGAGCGG TACTGGTTGGTATAAAATCAAAGAGGAATGGACGAGAAGATCAAAGATCG ATCTAAAAGATACAAGAAAACTGACTTCCTCGGTGAAGGCCAGGtacgcg ttttttataagaacaaactatataagaacataagggttcgatagccaaaa tattagGAATAAgttcagaacataaaatattcacaaaatggtgaaaaaag aactttttattgacattaacaaaaagttaaaaaaatacgatggcattgaa aattttggatgttgtaACAAAACGTGTAATAAACAAGTATTTcgaaatgt tcttatttcttcCACTGAGGTCGGATTCATTGGAATAAGTGTATTTtgaa cacgttttttataagaagaaactacataagaacataaggcttcaatggcc aaaatattaagaacaggtTAAGGACATTTAAGGTATTGTATGGTCcacac ctattttcttaggaaagtggacaaaaatacccacaaaatggagaaaataa gaacatgttaagaacattcaatgcttaaaactaaaaaagtttgcgtccaa aggctttaaaaattttgatgttcttataaaaaaacgtttgtATTTATTCA TCTATGGTTCTTGCAGAAAGGCTGAAAGATTTAAATATTTAAGGAACGAA ATTTCTTTCCACTTATTGTGAGAGACGATTCCGACTTGgttttcaatgat tttgttAATTCTCTGTTTAGTTTGCTACCGTCTATAAAGCTGAAGATTTG GAAAATGATAATCAAATTGTTGCCGTTAAAAAGGTATCTCAACTTGACTA CTGTATTGCATGAAAATTTCGCGGCatgaaaatttcgcggtttttttaca gaaaattgcATTTCCTGGCATGAAAATTTCGCGGTCGAGCTCCAAAATAA AGTAGATAGTGTTCAGAATTTGATTATGCCAGTGTTTTGAATAGTTTCTA GTTTAAATTCGCTACCGTACTGTATGATTTGATTATAATTAAAAATAAGT TCACTTTCTTTCTATCACGGGAAGAcgagttaaaggttttatttttacat aagtgttccgtttcatatcaggacattGTCTTGCTATTATTATATACTGA TTATAAGCAAAcagatgtttttattttcctttttctggcCAAtgttgctc cacatctgtgtcaatccaatgtgaaaaagcttctAAATAGCGCgacgcgc tgaatctaaaaatagattttattttctacataatcattactctcgatgta tttgtacgagttccaatcccatcaacctttgcgttaatctcttttgcacg ttaattgcattgtttgacaaaagatatattataacagcttgcacgtatct ttaattgagccgcgttgaattgtgggattgcaactcgtacaaatctCAAA Aagagtgaaaagtaataattatgacgtatgcgttgcggagcgctattgaa ATTGATGAAGCAAACGAAGTCACTCTtaattaaaacaataaaaaaataaa aacaatacctttaaaaatatgttttgttttaaaaataagaGTGGATATCG TTTActaactcgtcaattttaagCTTTATCACACTGaattgacatggatg tggagcaagattggttgtagaaaaaggcaaagaaaaacattttttcttta ttcagcacaatataacaataggcagtagacactgtcctgaaatgaaatat gtgtctggtaTGAAACGAGAACatttatataaaaatgaaaCCTTTTAACA TGCCTTGCAGATAACAAAAAAAATACTATGAGTTGAATGGTataatgaaa aatcaaaaaccaacATAAAAACAGNAATAACAGTCAATATGATTAAgaag aattaactttctttacaattttaatgacgttaaagttattgagaattgtt tttgtaaaagtgattcataaaagatgtctcatgacaattaatagGACACA Gagaaaaactttgataaacattgcaaatttaataacacacacaagaactt tctttctatagaagtggtacgaattgatacttttttccggacaccctgta taacaATAGATCTAGTGGTAAGCTGTAAAGAACACTGTGAAAGTATGCTT TACTTACACATAAACGGTTTAGTAGCTAATGTaaagtttctaaaaaattc tctgtttttaaaataattttgattccccaaagcaatagcgctccgcaacg catacgtcataattattacttttcacccttttttgacatttgtacgagtt gcaatcccacaattcaacgcggctcaattaaagatacgtgtaAGCTGTTA TATATATTTTGTCAAACGatcaattaacgtgcaaaagagattaatgcaaa ggttgatgggattaaaactcgtacaaacacatcgagagtaatgattatgt caaaaataaaatctatttttaaactcagcgcggtgcgctattgcAATACC TAATTCTCATATAAAAACATCGCCTAATCTATTTTCtacctttcaaaaaa aaactagaatttAGGAAACTATTTTAcacagggtgtctacgggaccttga aaaccttgaaaaccttgaaaatgaaccacccaacctttgaaaaccttgaa aactatcaattttctgggaaaaaccttgaaaaccttgaaaaatcgttaaa aaccttgaaaaaaacttcttccTATTCATCCTTTTTGTCATACAATTTTT CAATAGGGCAGTGGCTGAGTAACTCTTACTTATAGGTTCAGATTAGTTTT GAGATTGAATGCTCTTATCTTTGAGTGCTAgacttttttcattcattacC GCATACTATATTATGTTGGTTATATTATCATGAAAATATAAAGTACTGGA CCTGTATCTCgactttgtatttttgtaataggcactgctagcttcgttgc ctcctcttaaaaacataaaatgaacaatgaattttgataatgtacctctt gggaataccttgctaacgaCGTCAAAGCTtggacaaaagtctctgttgtt ctactcttcacAAGTCATTTATCTATATcatccgactaatatttctaaat tctGTCTCAAAAGTAATAATTTCAGATAGTTTGTGGTTCAAATTATGATA TTTGTaagacacaggctctcaactttggcttACTATTTTTTTAAGTCATA aaaaaagtgattcaaaagtatacacgcagttaaaattctgaattttagcg GTGAAAAACGTTTATAAGATATTATAGCAAacttatgaaaatattttgtc aaatttcgcCAGCTCAATactctaaaaaaaaaattcgccgGTCTCGAAAA TCTAACCAGACAttcaaaaagtaagaataatAAGTATGTTCCTAAACTGT TTGTCATGaggaaatttccaaaaaacctTTATAACATTTAGAGAATTACA CCTGTTTCTATAGCGATTCTGTCGCAACGAGTGCAACATATACTTTTATC ATTAGCTGAGTTTTTATCACTCATAGTCCGTTTGCATGAGCCCTAAGAAA TCGACTgttccccaattttcaaatcgcttcaggGCCGTTCATCAATAAAT AATTTccttaaaacaactctttttttgaaagagtcaaaatcaattttttt tcttttcggcGCCTCGTCGGTCACTGTAAACATTTGGTTTTTGCttatat ttctttatttctacagttgAAAGACTAGGGAGCTGGAGACAAAAACTCTT TTTGTGGTATGGTTCTAGAGAGGGAGATAGGAATTTAACTGTGGAAATAA TTCCCCGGCCACCAAAAGCGGATAAATTTTATTGCCgtcctctatttttc tttcgcctgccactctgaaaaaaaaaatcactgtaGAGAGCCATGTCAAc tgagtatcaaaaaaccttgaaaagtgccaaaatttttgccaaaatacttt gaaaaaccactttaaaaagaccaaaaaaaccttgaaaaccttgaaaatcc tgaaaaaaaaaatcgtagACACCCTGTTACAGTCCGCCGcctaaacaaaa attcaaaaattgagaGCTGCCATATATTACTGGTATACTTGGCTACCATA GTTTTTGCTTGCTTTCTAGCAAGGCGTGTTCTTATTTGAGAAGGCCCTTG GGAGTCTCTgtttgaactaaaaaaattacCCAGAAAATGTGCAGGTCAGT ATTAAAGTTTGGTtgattcttttctctttttgattTTAGATTAAACTTGG TCATAGAACTGAAGTGAAAGATGGTAAGTAGACCACTTTAACTACAATCA GTttcaaaatacttggcacaaaagggaaattgcccacgaaattttataac tacaaacaatttggaagcgctctaaattagatTAGAAGGGTAGagtctga gttttaacgctagacttaagacaagatttagacaaaattgccaatatgtt atggcactgattgtagtatATTTGATTATATTTGTTTTACGCAACGTTAA CACATCAAAGATTAATCGGCGTTGATGACATAGACTTCTTTTATTCAACT TTCTGGTCAGGAAAAAGAGCGACGGAAGGTGGacagtttcaaattttttt tactataccTACCAACCCTTGCGCCTTTATAGTCTACGTTAAAAGGAACT GTTTTCGAGTTTGAATACAATAGTATTTTGATGTGGCGCAAGGAAGAATT GGTTTCACAAATTGAAGGGAAACTATTCTGTTCTATTGTTTTTCCCTATA ATctcattttttaatatttttaacaatatAGGGATCAATCGAACAGCGCT GAGAGAAATCAAATTATTACAAGAGATTAGTCACNcgactaagttttggc cgataaggtatttgatTTTATTCGTTTTACGCAACGTTAACACATCAAAG ATTAATCGGCGTTGATGGCATAGACCACTTTTATTCAACTTTCTGGCTAA CCTTGGTCAGGAAAAAGAGCGACGGAAGGTGGacagtttcaatttttttt ttactatacctACAACCCTTACGCCTTATTCTACGTTAAAAGGAACTGTT TCGAGTTTGAATACAATAGTATTTTGATGTGGCGCAAGGAAGAATTGGTT TCACAAATTAAAGGGATACTTTTCTGTTCTATTGTTTTCCCCTATAATCT CATTTTTTAATATCTTTAACAATATAGGGATCAATCGAACAGCGCTGAGA GAAATCAAATTATTACAAGAGATTAGTCACCCTAATATCATTGGGGTAAG ATTATTCAAATCATTCAAAGCTATAATTTAACATTCTTTCACTTTCCCAC TCCCCTGGTTATTCGTCAGTCATTTGGAAATCCAGTTTTCGCAGTTAATT CTTTGCCACCGCTCTTATGAGGCTTAACAGggtcggatacagagggaggc tataaccaatggaggagagtgcactttattatcgtattaccttatatgga aactaattactcttcatgaataagatagcctacctcctgtatccgaccct gctTAATTTGGGCAAAATCAGATATTCAAAATGATTCTGAGATTTtctag agaaaaaaaaacaattttatgtgGCAGTGAAAACAATTATTTAGTCTTCA TTGTTTTTTTACACTCCGCTAAACAATCTCTCAAATCTTTTCTCTTTTAG CTGTTGGATGTATTTGGACACAAGTCCAGCATCAGTTTGGTTTTCGAATT TATGGAAACAGATTTAGAGGTACATGCAAATTAGTGATTGAATGAATCTA GTACtgcatttgaaagaaaattaagagTTGACCTTTCCTAGGGAAAGTTT ACAAACAATTCctagattgggcttttccagaaaaaaattgaatatggggg tggagtcgatataacattttttggaaatttacgccccggacattgtgact tttgaacccccggacagcaggtctaaccccctggacactcaaaattaccc ccaaacagagcaagtttacacccggacaagaaaaattttgtagatttttt actTCCCTCCGGACACAATATCCATACTCCCCCCCCCCTCATTTCCAGAA AAGCCCATTTTAGTTCCTGAAAACCTGAGAACAAAGGAGTTTCACACTAA AAGGCTCATGATCATGATTTTTTCCAGGTCATAGCGAAAGATACATCACT AGTACTCAGTCCCCCACACATCAAGAGCTTCGTTCTGATGACCATACAAG GATTGGAATACTTGCACCAACATTGGATTCTCCACAGGGTTCGTATATCA ACTCTAACGTCCCGAATAAAAACCCTGTTTATCTATTTTCTATCACAAGC tgaattgctctaaatagcctgttTTTAGCctataattaccttattttaCG GGTTCCGGAGGTAGAAATTCGGACCCCCTTTTTGTTCCGAGCCTCCTACT ATTTGGGACCTTAGAGTAGCTCGTGTGTCAAGCTCCTCTAGCCCGAAATT AGTTCATAAACTACAAGTGAGTCTCCATAAGCACGGACGAGGAACACaca tttgttcgaattaaggaaatctccagttatagaggttcgagttcaAGAGA CTCTAATATGCGTTAGAGCCGATATTTACTGGAAAGTTGAAAGCAATTTC TTTCAAAGGGTCTGTTTTAATGTTTGTGGCACCTCAGCCCACACCTGCAA CGAAGAACTGAGGCATTTTTTCACGGAAAAACTTGATAATTAGAAAACTT CatgatgttcatgacgtaatgtttaaatGCGAAAGCTCCGAAAATAGCTT GGGCGATTGCCAcaagttttattgtttaaattcaaaactagTTGGAAACA CCCGGTCTTCTTgaggtgtttccgtataaaatattacgtcatgagAATAT AACGAATACACACGGTgcaaagtaagtaagtaacaACAAATTCTTCTTCT AAGAATTGCTTAATTTCTCAGCACTCGATCAGAAAAACTAATCGGCATGA TACCCAGTTTACGTCAAATCTCGTAACAAATTTCACAGGATTTCGAACTT TCCTACGGTTTTGCCCCCTAAATGTATTTATATTATCTTTGTAGGATATG AAGCCGAATAACTTGCTGCTAGATCCAAGCGGTGTCTTGaaagttggtga ttttggtttAGCTAAGGTGTACGGCTCGCCCAATCGTGTTTACACGCATC AAGTAGTCACAAGGTATgagcatagtcattataaaaaaacccggtctggc aatgtattgtgttagctttttgttcaattttcttttgttacaaacaaaag acaagttgcaattggtatactttttgatcacgttacca
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056845TCONS_00056845Clytia hemisphaericatranscript
TCONS_00056846TCONS_00056846Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056846-proteinTCONS_00056846-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_284supercontigscaffold_284:190718..198055 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
77.39 75.85 57.88 47.03 22.49 18.62 30.64 29 26.55 22.11 20.12 21.99 22.01 21.21 28.66 33.56 31.89 32.64 15.15 17.15 21.96 25.87 56.17 53.54 45.48 55.05 25.23 22.03 32.19 31.92