XLOC_034891 (gene) - C. hemisphaerica

Overview
NameXLOC_034891
Unique NameXLOC_034891
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_253:1086160..1091617+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034891 ID=XLOC_034891|Name=XLOC_034891|organism=Clytia hemisphaerica|type=gene|length=5458bp|location=Sequence derived from alignment at scaffold_253:1086160..1091617+ (Clytia hemisphaerica)
TGAGCCCTGACTCAATCTCAGCGACGATCTAAAGGTGATAATTAAAAATC TTATAGAAAGATGCAGATCAATTTATTAACACTTTTGCATCGTCATTGAG TCAGGACCATTACAACCAAAAACTAATCAAAGGACTGTTTAAAAGGTTTT GAAGAAAACTCTTCTAGCCTCGATCATGGAGAATGCTTACCTTAGGTACA CGTTTCAGTCTGTTCAGATTGATGCGGACGACCAAACTCTTTGTTGGTTT TGATTGAGCTTCATCTTCTTGATCACTAGATTCGATACGTGCCACCTTTC GATCTGTACCACCATTCACAGCACGGGGATTCTTCCTCTTCAACGGGGAA TCATCTCCAAGGATATCAATCTCCATATCTTCACCAACGGCGGGCGATTC CTTATTTGATTGACGTTTCAGCTTTACAAGATTCAAAGGAATCTTCACTA ACAAACGTTTTGGTTGCTCTTTGACGGCAATTTCTTTGACGGCAATTTCC TTGACGACAATTTCTTTTGCGTTGTTTTGTGTTGTCATATCATTTATTTG GTTGAACACATCGAAACAATTACCAGGACTTGGCGTATCTCTCTTTTCTG TTTCCAAAACAGACTGTGGAATAGGAGAAGGTTGCTCTATAGGTTCTTGC TTCACAACACTGTTTCTGCGACTTTGCTTGGATGGTTCTTTGACACGTGT TACTATAACATCGTCTGTCGTGGAGACTGATGGTGGTTNCAAGCAAAACC AATTTAATTGAATAAactcttttttgtcattttaaacccttaaaactaaa gaaaacTGAGCCCTGACTCAATCTCAGCGACGATCTAAAGGTGATAATTA AAAATCTTATAGAAAGATGCAGATCAATTTATTAACACTTTTGCATCGTC ATTGAGTCAGGACCATTACAACCAAAAACTAATCAAAGGACTGTTTAAAA GGTTTTGAAGAAAACTCTTCTAGCCTCGATCATGGAGAATGCTTACCTTA GGTACACGTTTCAGTCTGTTCAGATTGATGCGGACGACCAAACTCTTTGT TGGTTTTGATTGAGCTTCATCTTCTTGATCACTAGATTCGATACGTGCCA CCTTTCGATCTGTACCACCATTCACAGCACGGGGATTCTTCCTCTTCAAC GGGGAATCATCTCCAAGGATATCAATCTCCATATCTTCACCAACGGCGGG CGATTCCTTATTTGATTGACGTTTCAGCTTTACAAGATTCAAAGGAATCT TCACTAACAAACGTTTTGGTTGCTCTTTGACGGCAATTTCTTTGACGGCA ATTTCCTTGACGACAATTTCTTTTGCGTTGTTTTGTGTTGTCATATCATT TATTTGGTTGAACACATCGAAACAATTACCAGGACTTGGCGTATCTCTCT TTTCTGTTTCCAAAACAGACTGTGGAATAGGAGAAGGTTGCTCTATAGGT TCTTGCTTCACAACACTGTTTCTGCGACTTTGCTTGGATGGTTCTTTGAC ACGTGTTACTATAACATCGTCTGTCGTGGAGACTGATGGTGGTTGGACTT GAGAATCTGTGGAGAAAAAATCTATCATTTTCAATCTATTGACTCCAAAG CAAAAAGGTAATCATGGACAAAGAATAATTTAATCTTTTACTGGTTTTAA AGTCAAGTGAGAGGTAAAGGTAACGATTAAGATTTCACTTCATGTTAAAA AGAATTTCTAGAAAGAGAAGAGTATTAGAGATAATACTGACCAAGAACCG GTTGACTGGACCCAAGGAGATCCAAACTGGCTTCAATTGGCTCTGGTTTC ACTTCCTGTAGAGGTTGATGTTGTTGAGCAGATGGTGGTTGTTGGGCAGA AGATATTGGCTGAAAGGATGTTGCACCTGCCAAACTACTTGTCGGTGGTA GTGAAGGTTGTGTGTTATTTGTTGGTGGATGAGAGACTACTGCAGGTTTA TTTGGTAGCGGTTGTTGTTGCTGGTCACTTATCAGAGGTGGTATACCTGG AGTTGTGGTAGGTGGTACAGCTGCAAATACACTGTTGTTTGGAATCGGTT GAAAATTAGAAGTAGAGCTGTTATGTAATGTCTGCATTGGTGGTTTAGTT GCAATATGAGGAGGAGGCAAAACAGTGGTAGTTGTTGGAGGAGGATGAAT ACCAGGAACCGCTTGAGGAGGATGCGCATTACTCATAGTGTGGGTAGGTG GCATACCATGAACTGATTGTGGATGAGGTATACCTGGAAGGGAATGTANT GTTATGGtgctgctgttgttgttgttgttgcataTTATTGGTGCTTGTCA TTGGAGCTGACGGAGTAAAGTTCAATTCCATATTGTCTGATGGATTAACT GGAGGTTGCCCACGATTGAAATTCAGAGGAGGTACAGTGGCCTGAGGTTT TAAAGAATTATTTGAGGGTTTATTGGATTCTGGTAACAatgtctgttgtt gttgttgaggttgttttgatgaaaaatctaAAGACTGTTCGTGATTAAAA TGTATTGGTTGCTGCAGTCTATTATGATGGTTCAAATTCACCATCGGAGG AGGAATTTGAGACATGTGAGGGAACGCAGGGTTGGTTGTTGGTGGAAAGG AGTTATTGGTAGTTGGTGGGAATCCCATGCCTGGGTGATGTGTGTATGGT GGAGGAATTTGTTGGTGGAAATTAAGTGCATTCATATCATTCCGAGTATT CAAGTTCATATTCAAATGTGGTTGCTGTTGTTTATATTGCTGATCCTGTA ACATATTAACAGGTTGTTGTTGCTTCTGAGAAGGTTGTTGATTTGAATAG TGTTGAAGCTGATTCATATTACTGTTCATTGAGTAGGGTGGAGGAGGTCC ATTCGGTATCATTGTTGAAATATGATCGAACGGTGGTGCGTCAATGCTGG TTGTCCTTGTTAGGATAGCGTTAACGGTTGATGGTACTGCTGAATTCACA TCACGAGGATGACTGAAGGTTGTAGTGATCAGTGGTGGCTCTTGCAATGA GATTGTCGTAGTTGTAGGAGGAGATAGCAGATTATCTGGTTTAGTTTGAG GTACAGGTGCAATTGGAGGAAGAGGTTGGACTTGCGACTGCAAAggtatt ttagtgttttttagtTTTGGCTCTGGCTTTTCTTCATGCAAATCGAGACT GGCTGGAAGATTGGTGAGGAGAGCTGGGGCTGGAAAATTGGTGGCGAGAG TTGGAGCTGTAGTTGGAGAGGTTTTGATTTCTTCCTTCAAACTTTCTACC GGTTTACACGAGGCAGATTGTGATGCAATAGGTTTAGGTAATATAGTTTC ATTGGAACTTGAAGTTGTGATAGTGGTGAGAGGAGGAGGTATATCTTGAG TAAAAGAAAGCAAGCCAGATGTCGTGTTCGTAGTAGTTAAAGCTGATGAN TATTCAAGTTCATATTCAAATGTGGTTGCTGTTGTTTAAATTGCTGATCC TGTAACATATTAACAGGCGGTTGTTGCTTCTGAGAAGATTGTTGGTTTGA AAAGTGTTGAAGCTGATTCATATTACTGTTCATTGAGTAGGGTGGAGGAG GTCCATTCGGTATCATTGTTGAAATATGATCAAACGGTGGTGCGTCAATG CTGGTTGTCCTCGTTAGGATAGCGTTAACGGTTGACGGTACTGCTGAAGT CACATCACGAGGATGACTGAAGGTTGTAGTGATCAGTGGTGGCTCTTGCA ACGAGATTGTCGTAGTTGTAGGAGGTGATAGCAGATTATCTGGTTTAGTT TGAGGTACAGGTGCAATTGGAGGAAGAGGTCGGGCTTGCGACTGCAAAGG TATATTAGTATCTTCTAGTTTTGGCTCTGGCTTTTCTTCATGCAAATCGA GACTGGCTGGAAGATTGGTGAGGAGAGCTGGGGCTGAAAAATTGGTGGCG AGAGTTGGAGCTGTAGTTGGAGAGGTTTTGATTTCTTCCTTCAAACTTTC TACCGGTTTACACGAGCCAGATTGTGATGCAATAGGTTTAGGTAATATAG TTTCATTGGAACTTGAAGTGGTGATAGTGGTGAGAGGAGGAGGTATATCT TGAGTAAAAGAAAGCAAGCCAGATGTCGTGTTCGTAGTAGTTAAAGCTGA TGCTGCAAAGGGTGAAGAAGTTGTCACAAGAGCAGAAACTGTTGTGACGT CATTCTGTGTGGTTGGGGTAGGTGTTAAACCAAAGTTGGAGATATTGGGT GAAGAATCAATAGGGCTTATGATACCTTGTATGGTTGTATTTAACCTTTG TTCGAAGAAATCGCTATCATCGTCAAAGATCGATTTTGGTGGCTCTAATG GAAGTCCAGAAAAGATCTCTTTCATATCATTGGCTATCAAACTTGATCTA CTCATTTTAATTGGTTCAGGTTTAGGGATTACAGGTTTTTCGTCCTTTTG AGCAGGCGGTTTGGATAAAGATAACTTTTTCGGAGTACTATCTGTAGTAT CCATTGCTTCAGACGATTCAGAAATACTACCAAAAACATCATCCTCAGAT TGTTCAATAACTTTAGCCTTTTCAGGCTCTTTCGTTAAGCTTTCTCTACC TTTACAGCTTGTAGtagattgtttttcttttttatctttatttcgAACAG AAGACCTTGACGATTGCCGCCTAGTTTTTCCAACACTTTTAGGTTTTTCA GTCTCTTTATTAGTATTATCAGCTACGGGCATCTTTAACTGAGCTTTCGT TTTGAATGGTTGGCCACCATTAGAACCAGAGTTCACTTTTACAGATGCTG AAGCCGTGTTCATACCCTCTATCCTTGTATTTTTACTCTTTGATTTGTCC TTAGTTTCGTTACTTTTTGAAGATAGTTTATTGCGTTGGTCAGTCTTTTT ATCTTGTGATAAAGTAGAGTTTTTATTATTCAAGTCATTTTGTTGACTTT CAGCTTTTTTGCTGTCTTTACTGTACAAATTGTTCTTTTTGTGCAACACA AGAGAATCATTAATGTCACTCTGTTGGAAAGAATCAAATGCACTTCGGTC TTCGGACTCGCTCATTGAAGTATTAGTAGTCGTATCTTTTTCAAGATCAG ACAACTCTTTACCAATCAAATCGTCAACCGTGAAATTATCATGTGAATTT GCAATTGGAAAATTATCAATGTCCTCAAACAACTTCATGTCACTGTTCAT GTTGTCTAAAGGACTAATAGGTTTTTCAGGGGATGATCCAAGTGAAAAGC CCAAGGTAAATGGATGCGAATTAATGTCCATCAAGTCTAAACCATTACTA GCTCCCTTCATCAGTCCTGTGTTTTCTTCTTTCACCGCTACCGATGTCAG ATTCATTTCTTTGGATTTTTCGGGGAACTTCAAACCCATCATGTTTGTGG TATTATCATTAACGCCAATTGGAATTTCTGTTAGATAATTATTATTGTTG CTTGGCAATTCCTTTTTTATCTTGTCTGGTGGGTCAGCTTCTTTGTTTGT ATttggct
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055447TCONS_00055447Clytia hemisphaericatranscript
TCONS_00055448TCONS_00055448Clytia hemisphaericatranscript
TCONS_00055449TCONS_00055449Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_253supercontigscaffold_253:1086160..1091617 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.09 0.06 0.07 0.39 0 0 0 0 0.29 0 0 0.03 0 0 0 0 0.03 0.03 0.44 0 1.14 2.71 0.36 1.64 0 0.02 0.78 2.19 1.73 1.82