XLOC_034767 (gene) - C. hemisphaerica

Overview
NameXLOC_034767
Unique NameXLOC_034767
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_251:862735..867990+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034767 ID=XLOC_034767|Name=XLOC_034767|organism=Clytia hemisphaerica|type=gene|length=5256bp|location=Sequence derived from alignment at scaffold_251:862735..867990+ (Clytia hemisphaerica)
TCCTTCAATAGTGGTACataaaaaattagcaaaattcGGTGAACGTAACA ATGGCCTTctttcatcaaaacaaaaaatatggtAGCCCAAGTAGCGTGTT Cttgaaaaaaagaacttttgacggattttcacttttattttttctcaaga CAATTATATCTAGTCATTATGAAAGTTTCTTTATCACCAAGAGCATACTC TAAGGTTCTCCTCCATGCATGTAAATACCCACATAAAGCTGTCAATGGTG TTTTGTTGGCTGAAGAATGTAAACACACAAGTGATCTTTTGAGAATTGTT GATACAATTCCACTTTTTCATCAATGTCTTGGACTAGCACCAATGCTTGA AATTGCTCTTAATCAGGTAATCTTTATAATCTATTTGATTTGTTAATTGT TTTATCAAGAGAGACAGGGTCTTAAGCCCAAGAGAGACAGCAGGGTCATC TTAAGCCTTATAAAACCCTAAATACGCCGCCACACAAACCGCGCAACACA ACACCCTGCCACCCCGCCCGCCCTGCCCCGCCCCCATACTTGATACTTGC TGTTTAAAGTCAAGGAATGATGAAGATCCTTTCTTTCACCGTTCAAACTA ATTTTTTTCCATTTAACAGCAAAAAATAAACATTTAAAACCGAAGAACCA CTGTTTAGATGCGTGCCTGCGCTGCGCGGCCAGTTTGATCAACTTCAGAA TCTAAGCGTCTCGGTTTCCGGTAATTTATTTGCTACTCACTGTAGGAGGG TACCATTTTAAAACGGCATTTTTCGCAGTCCTAGCTACCAAACCAAGGAA AGTTCTGAAGTTTTTGCGGCTTCAAGCCAAAACATTCAAGGTCATTTTGA CAAAATCATCAGTTTGAAGATGTGATTTATGGGATAGAAGTTAAAGTAAA GGTACGTGCACACAATGTAGCAAAGCTGCTTCGCTCATAAATTTGTTTCC CAAAAATCACCAACCAGGTCACAATCCCTTATTTCAGGCAGGGAaatccc tcaattgcggtatactgcaattgcggtagttttcattcgtgtttagccta caaaggcttataacgactacatatagtgctggtcgacaaagacaaacaaa catcgactgtaaaaaatcgtacgagaagaaattttttctttattaaaaga atctgatctacggaaaaaatattttgtctgtgcgttaaaaagatatgatc aattatgttcaaaaattgcctgtttttcattgaatcttgaattctgatTC TTGAAtgtactgcaattgcggtatatgaaaattgtaaaattgacgtttat actgcaattgcagtaaaaatttactaccgcaattgagggatttccctgac tgtatTTGTAGCACTGGGagttgaagatgagaaaaagccTACACTCTAGA CAGATTGAAACAATTTATAGCTGCTCGTTTTGGGAGACACTGAATAAGCA AGGCAATGATCCTTGATGTGTGATTGATAAGAAAATTCTTGTTGGTGTGA AGGCGCAATAAgagaatattttttatatgatgACAAGATTAGAATAGGGT GTAAACTGGAaccatgaaaaaatactttttttgaattttcaaaattgtca caattttttatcaaaatttatcatattgtaAGACTTCTTGCGCAATTTTT AGGTCCATACGTCAAAAATCCACTGTTTGCCCCAGGGGTATCTGATTCGC AGTAGTagcaaaaaacggcaaaaatggcattttttgtccattttaagact acaaaaggccaggaaatggtcaaaatggttttattttgatgtgAGAGCGT GATCAGGGATTTATATGAGCTGCCAATTTTGGTCATTAGTTTTACTTTAG TTGTCCTTTGTAAATTTACTTAAATCAGGGAAAATGTGTTAATTGTTAGA ATTAGTTTTTTGGCCTGTATTTGTTTCATATATGATTCTCTCTTTCGTCT AAAATGTTAGTGACAAAAGTCAACTTACTCTTGCACAAGATATTGAGTAA ATCATCATTTTACACAGAGTTACTTTTAGATTTCCTattaaaattaataa taattattattttttcatagaTTGACAGTTACTGTAGAAGCAATCAACTC GTCATTGCTGGTTATTATCAAGGCAATGAAAATTACAATGACAACGAGTA AGTTTCATTCTTTGTCCTGAAATATTAACTTTATTATAACTGTGTCCTCT TCAGGGTTAATGAATCTCATGGANCATCCTGAATAATaacctgcaactca accaaatagaaaaaaaaataataatatactTTATTACCGTAAGtaggtct aatatcgacatccctcgtctaattccgacacccttctttagaatagagac aggaataatatgaaagtttgaatcgctgattgaaaaaggattatttctCC CTGCCCACtaagcaaaagaaaaagttttgacCCTTCTATCagtttcagct gataaaaagggtgttaAAATTAGAttagggatgtcgacattagaccaagt tacagtaTAACTGTAGTCCTCTTCAGGGATAATGAATCTCATGGAGAGAA ACATTTAGTTACCCATTTGGTATCATAATTATCTCAAAAATTGAGCTCAT TCTTCAATAAGTCGTCAAATGCTACACAACAACACCCTTTTGCTGAGAAA GACCATGTCTTCAGAACTGGcttttgtttctttacagaaatatggattct atttttttgtgagggttttctcaaaatgctttaaaattAGCTCGCAAAGA CTAGAAGATTTctcacaatttttcaaaatgacaccTAATTTAAATTCTCT CTTTGTTATGGTTTTTGTTTCTCGTCAAGAGTTGATTCTTTATTAAGTTA TATATAATCCAACTTGAATTTTGTCAttcgatttttatttttatttgatt atattattttgaataagTGTGATTTAGACTTATTTTAACCGtctccctct tttttttccagtCCTGATTTTATCGCTTACAAGATAGGAGAGAAACTTGT TGAAAACTCACAAAATTCCATATTAATGATGGTATGTCaacttttcatga ttttgtaTTGAAGatctaaccctaaccctaaccctaaccctaaccctaac ccattcaaaatttttaaaggttaaaaaatatagaaatttcTTTTCGCTAA CATGATTGGCTCAAATCATGGCAAATAAGGCCAGAAACAAAGAAACCCAA AAACTTGCACACCAAAAGTATGGATAAAGTTATAATGTTAGGAATGCGAT CATTTATCTATCTATACCTTTAGTAGTATCGAGATTTGTGTCTTGTTTGA AAATTCAgacaatgattaaaaaaaaatatattttaatcttttACAGATTG ATAATCAGAAAATGGATGTCGACTGCAAAGAAACTGCtctgaaggtattt tattgtttttattctttgaTTGCTTTAAATTCTATTGTGAGTATAAAGTT GGTTGTCTGAAGTCAATGTATTCATTGCCTTTCTTTGACGTCTTTCAAtc atctttttcaagcaaagtttttaaagtttttgactACTCTATAAACAGCT AGAATAGGCAGAGCGAAAAGTCAACCGTCTAAGAAACCTCATACTTTGAA AAATGTGAGCGTAAGCTCAGGTTGCTCTGAAGGCCtgaaaaccgattttc tggcaaactACAAATAAACCATAGAAATAATGCTACTTAGGGACTAAAGa atagctcattcgcttataaggtcgtgtttttttaacgtttatttttattt gcagCTTTATCAAATGCAAGATAATAAATGGAAAGAAAATCCAACTTGGT AAGTCTTCCTAAACTTCCTTTATAATGTTTCTATGGAAATGTCATCTCCA TTTTAGTTCCATAGGCCATTTTACAGTCtcaaggccggtctccacttgcg cgcgcttcaaaACGTATtaggtaatcaggaccactgcgtgCTAATGACAA CTTACTATtagtccaaagttttgaaagattttgaagattttggcgTCTAG GCAACCGGAAGTCGTTACTAGAGCGCAACCAGTCCATGATTCCCATGAGT CATTACGACTCACCTAAAGGAAAGTATTAATACATGGGAGTTTCCCTAAC TCGAAAACACACGGGGAATATAAAtgtgtttgagttaaggaaatttcgaa atacgaagtaaggtttataaggtattAACTGAAGGGGACTAGAAatcttg tttgagttaaggagacattcgagttatggaggttcgaattacagagactt CACTGTATATATGGATCTTTGAGTTGGGgaaaatatattctttgaaagaa atttaCATTGAGCGAAAATTCCCTTGGTTAACTTGCTGTTATTCTTTCGA CTGTAATAATATTGAACAATACAGATTTGAATGTTTGGACCTAGCCAGGt gggtggaggtcctttaaattaaccgaatgttcgttcgttcttcgtccgtc cgttcgtctttgggtcaataatttttttggattttttttgtaaaattgct tcattagtttttcctaattttttggaCTACTCGTTACACTTTGTCAATCT CTTGCTattttgtcctatttttatctgattctcattatcaggtaggtcca ttcagcatattgcttgtttATCCATCGTCACATGTTGAATTTCAGATAAT GATTTTTATGAGCTTAGTATAtagtaaagctcaaatagcagatgtagaac gataaactcggtatactgtacaatgattttttgtttctttattgTAGGCA TCTTGTTGGAGGAGAGACAGCTTTGGCGTGTTCCAGTGATCTGATGAGAA GCAAAACATACCAGAGTTTAGTGGACTTTGATAACCATCTAGACGATATT ACATCTGATTGGTTAAACCCTCATCTTAATAAAGTGATCGAGTTGACGTC GACTGGAGAATAACCCATTaggataggaaatatttaaagtaCTTTTTACC CACTTTTTAACAATCGATACATAACTTGGCTCCATTAAAGTGTATTAGTT TTGGCGGAACTGGAAACCTTTACCCAAACAAATACTCAAATTTTACATAA CCAATTTTAGATATAGAAATTTCTATGAAAATTTAGTCCTGTTTTTTTAT TACCGAGAGAAATCGTTAGTTTCTGTTAAATTGAATACCGACCAAAATTG CATAAagttactttaggcgtagaaactttcgcgagcagaaactttcgcga ttttcgcgaattttggcccttttcgcgaaagtaaatgtctttaaaaattc taggaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055197TCONS_00055197Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055197-proteinTCONS_00055197-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_251supercontigscaffold_251:862735..867990 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
EMC8PREDICTED: ER membrane protein complex subunit 8 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
56.67 58.62 31.28 28.34 54.24 39.94 56.66 55.65 59.06 46.99 43.73 43.54 31.39 28.04 35.91 37.89 50.66 50.75 17.57 25.6 49.29 43.09 46.74 50.33 25.07 31.75 48.06 33.66 36.86 33.83