|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055197 ID=TCONS_00055197|Name=TCONS_00055197|organism=Clytia hemisphaerica|type=transcript|length=1114bp
TCCTTCAATAGTGGTACataaaaaattagcaaaattcGGTGAACGTAACA
ATGGCCTTctttcatcaaaacaaaaaatatggtAGCCCAAGTAGCGTGTT
Cttgaaaaaaagaacttttgacggattttcacttttattttttctcaaga
CAATTATATCTAGTCATTATGAAAGTTTCTTTATCACCAAGAGCATACTC
TAAGGTTCTCCTCCATGCATGTAAATACCCACATAAAGCTGTCAATGGTG
TTTTGTTGGCTGAAGAATGTAAACACACAAGTGATCTTTTGAGAATTGTT
GATACAATTCCACTTTTTCATCAATGTCTTGGACTAGCACCAATGCTTGA
AATTGCTCTTAATCAGaTTGACAGTTACTGTAGAAGCAATCAACTCGTCA
TTGCTGGTTATTATCAAGGCAATGAAAATTACAATGACAACGAtCCTGAT
TTTATCGCTTACAAGATAGGAGAGAAACTTGTTGAAAACTCACAAAATTC
CATATTAATGATGATTGATAATCAGAAAATGGATGTCGACTGCAAAGAAA
CTGCtctgaagCTTTATCAAATGCAAGATAATAAATGGAAAGAAAATCCA
ACTTGGCATCTTGTTGGAGGAGAGACAGCTTTGGCGTGTTCCAGTGATCT
GATGAGAAGCAAAACATACCAGAGTTTAGTGGACTTTGATAACCATCTAG
ACGATATTACATCTGATTGGTTAAACCCTCATCTTAATAAAGTGATCGAG
TTGACGTCGACTGGAGAATAACCCATTaggataggaaatatttaaagtaC
TTTTTACCCACTTTTTAACAATCGATACATAACTTGGCTCCATTAAAGTG
TATTAGTTTTGGCGGAACTGGAAACCTTTACCCAAACAAATACTCAAATT
TTACATAACCAATTTTAGATATAGAAATTTCTATGAAAATTTAGTCCTGT
TTTTTTATTACCGAGAGAAATCGTTAGTTTCTGTTAAATTGAATACCGAC
CAAAATTGCATAAagttactttaggcgtagaaactttcgcgagcagaaac
tttcgcgattttcgcgaattttggcccttttcgcgaaagtaaatgtcttt
aaaaattctaggaa Run BLAST on NCBI protein sequence of TCONS_00055197-protein >TCONS_00055197-protein ID=TCONS_00055197-protein|Name=TCONS_00055197-protein|organism=Clytia hemisphaerica|type=polypeptide|length=200bp
MKVSLSPRAYSKVLLHACKYPHKAVNGVLLAEECKHTSDLLRIVDTIPLF
HQCLGLAPMLEIALNQIDSYCRSNQLVIAGYYQGNENYNDNDPDFIAYKI
GEKLVENSQNSILMMIDNQKMDVDCKETALKLYQMQDNKWKENPTWHLVG
GETALACSSDLMRSKTYQSLVDFDNHLDDITSDWLNPHLNKVIELTSTGE Run BLAST on NCBI transcript from alignment at scaffold_251:862735..867990+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055197 ID=TCONS_00055197|Name=TCONS_00055197|organism=Clytia hemisphaerica|type=transcript|length=5256bp|location=Sequence derived from alignment at scaffold_251:862735..867990+ (Clytia hemisphaerica)
TCCTTCAATAGTGGTACataaaaaattagcaaaattcGGTGAACGTAACA
ATGGCCTTctttcatcaaaacaaaaaatatggtAGCCCAAGTAGCGTGTT
Cttgaaaaaaagaacttttgacggattttcacttttattttttctcaaga
CAATTATATCTAGTCATTATGAAAGTTTCTTTATCACCAAGAGCATACTC
TAAGGTTCTCCTCCATGCATGTAAATACCCACATAAAGCTGTCAATGGTG
TTTTGTTGGCTGAAGAATGTAAACACACAAGTGATCTTTTGAGAATTGTT
GATACAATTCCACTTTTTCATCAATGTCTTGGACTAGCACCAATGCTTGA
AATTGCTCTTAATCAGGTAATCTTTATAATCTATTTGATTTGTTAATTGT
TTTATCAAGAGAGACAGGGTCTTAAGCCCAAGAGAGACAGCAGGGTCATC
TTAAGCCTTATAAAACCCTAAATACGCCGCCACACAAACCGCGCAACACA
ACACCCTGCCACCCCGCCCGCCCTGCCCCGCCCCCATACTTGATACTTGC
TGTTTAAAGTCAAGGAATGATGAAGATCCTTTCTTTCACCGTTCAAACTA
ATTTTTTTCCATTTAACAGCAAAAAATAAACATTTAAAACCGAAGAACCA
CTGTTTAGATGCGTGCCTGCGCTGCGCGGCCAGTTTGATCAACTTCAGAA
TCTAAGCGTCTCGGTTTCCGGTAATTTATTTGCTACTCACTGTAGGAGGG
TACCATTTTAAAACGGCATTTTTCGCAGTCCTAGCTACCAAACCAAGGAA
AGTTCTGAAGTTTTTGCGGCTTCAAGCCAAAACATTCAAGGTCATTTTGA
CAAAATCATCAGTTTGAAGATGTGATTTATGGGATAGAAGTTAAAGTAAA
GGTACGTGCACACAATGTAGCAAAGCTGCTTCGCTCATAAATTTGTTTCC
CAAAAATCACCAACCAGGTCACAATCCCTTATTTCAGGCAGGGAaatccc
tcaattgcggtatactgcaattgcggtagttttcattcgtgtttagccta
caaaggcttataacgactacatatagtgctggtcgacaaagacaaacaaa
catcgactgtaaaaaatcgtacgagaagaaattttttctttattaaaaga
atctgatctacggaaaaaatattttgtctgtgcgttaaaaagatatgatc
aattatgttcaaaaattgcctgtttttcattgaatcttgaattctgatTC
TTGAAtgtactgcaattgcggtatatgaaaattgtaaaattgacgtttat
actgcaattgcagtaaaaatttactaccgcaattgagggatttccctgac
tgtatTTGTAGCACTGGGagttgaagatgagaaaaagccTACACTCTAGA
CAGATTGAAACAATTTATAGCTGCTCGTTTTGGGAGACACTGAATAAGCA
AGGCAATGATCCTTGATGTGTGATTGATAAGAAAATTCTTGTTGGTGTGA
AGGCGCAATAAgagaatattttttatatgatgACAAGATTAGAATAGGGT
GTAAACTGGAaccatgaaaaaatactttttttgaattttcaaaattgtca
caattttttatcaaaatttatcatattgtaAGACTTCTTGCGCAATTTTT
AGGTCCATACGTCAAAAATCCACTGTTTGCCCCAGGGGTATCTGATTCGC
AGTAGTagcaaaaaacggcaaaaatggcattttttgtccattttaagact
acaaaaggccaggaaatggtcaaaatggttttattttgatgtgAGAGCGT
GATCAGGGATTTATATGAGCTGCCAATTTTGGTCATTAGTTTTACTTTAG
TTGTCCTTTGTAAATTTACTTAAATCAGGGAAAATGTGTTAATTGTTAGA
ATTAGTTTTTTGGCCTGTATTTGTTTCATATATGATTCTCTCTTTCGTCT
AAAATGTTAGTGACAAAAGTCAACTTACTCTTGCACAAGATATTGAGTAA
ATCATCATTTTACACAGAGTTACTTTTAGATTTCCTattaaaattaataa
taattattattttttcatagaTTGACAGTTACTGTAGAAGCAATCAACTC
GTCATTGCTGGTTATTATCAAGGCAATGAAAATTACAATGACAACGAGTA
AGTTTCATTCTTTGTCCTGAAATATTAACTTTATTATAACTGTGTCCTCT
TCAGGGTTAATGAATCTCATGGANCATCCTGAATAATaacctgcaactca
accaaatagaaaaaaaaataataatatactTTATTACCGTAAGtaggtct
aatatcgacatccctcgtctaattccgacacccttctttagaatagagac
aggaataatatgaaagtttgaatcgctgattgaaaaaggattatttctCC
CTGCCCACtaagcaaaagaaaaagttttgacCCTTCTATCagtttcagct
gataaaaagggtgttaAAATTAGAttagggatgtcgacattagaccaagt
tacagtaTAACTGTAGTCCTCTTCAGGGATAATGAATCTCATGGAGAGAA
ACATTTAGTTACCCATTTGGTATCATAATTATCTCAAAAATTGAGCTCAT
TCTTCAATAAGTCGTCAAATGCTACACAACAACACCCTTTTGCTGAGAAA
GACCATGTCTTCAGAACTGGcttttgtttctttacagaaatatggattct
atttttttgtgagggttttctcaaaatgctttaaaattAGCTCGCAAAGA
CTAGAAGATTTctcacaatttttcaaaatgacaccTAATTTAAATTCTCT
CTTTGTTATGGTTTTTGTTTCTCGTCAAGAGTTGATTCTTTATTAAGTTA
TATATAATCCAACTTGAATTTTGTCAttcgatttttatttttatttgatt
atattattttgaataagTGTGATTTAGACTTATTTTAACCGtctccctct
tttttttccagtCCTGATTTTATCGCTTACAAGATAGGAGAGAAACTTGT
TGAAAACTCACAAAATTCCATATTAATGATGGTATGTCaacttttcatga
ttttgtaTTGAAGatctaaccctaaccctaaccctaaccctaaccctaac
ccattcaaaatttttaaaggttaaaaaatatagaaatttcTTTTCGCTAA
CATGATTGGCTCAAATCATGGCAAATAAGGCCAGAAACAAAGAAACCCAA
AAACTTGCACACCAAAAGTATGGATAAAGTTATAATGTTAGGAATGCGAT
CATTTATCTATCTATACCTTTAGTAGTATCGAGATTTGTGTCTTGTTTGA
AAATTCAgacaatgattaaaaaaaaatatattttaatcttttACAGATTG
ATAATCAGAAAATGGATGTCGACTGCAAAGAAACTGCtctgaaggtattt
tattgtttttattctttgaTTGCTTTAAATTCTATTGTGAGTATAAAGTT
GGTTGTCTGAAGTCAATGTATTCATTGCCTTTCTTTGACGTCTTTCAAtc
atctttttcaagcaaagtttttaaagtttttgactACTCTATAAACAGCT
AGAATAGGCAGAGCGAAAAGTCAACCGTCTAAGAAACCTCATACTTTGAA
AAATGTGAGCGTAAGCTCAGGTTGCTCTGAAGGCCtgaaaaccgattttc
tggcaaactACAAATAAACCATAGAAATAATGCTACTTAGGGACTAAAGa
atagctcattcgcttataaggtcgtgtttttttaacgtttatttttattt
gcagCTTTATCAAATGCAAGATAATAAATGGAAAGAAAATCCAACTTGGT
AAGTCTTCCTAAACTTCCTTTATAATGTTTCTATGGAAATGTCATCTCCA
TTTTAGTTCCATAGGCCATTTTACAGTCtcaaggccggtctccacttgcg
cgcgcttcaaaACGTATtaggtaatcaggaccactgcgtgCTAATGACAA
CTTACTATtagtccaaagttttgaaagattttgaagattttggcgTCTAG
GCAACCGGAAGTCGTTACTAGAGCGCAACCAGTCCATGATTCCCATGAGT
CATTACGACTCACCTAAAGGAAAGTATTAATACATGGGAGTTTCCCTAAC
TCGAAAACACACGGGGAATATAAAtgtgtttgagttaaggaaatttcgaa
atacgaagtaaggtttataaggtattAACTGAAGGGGACTAGAAatcttg
tttgagttaaggagacattcgagttatggaggttcgaattacagagactt
CACTGTATATATGGATCTTTGAGTTGGGgaaaatatattctttgaaagaa
atttaCATTGAGCGAAAATTCCCTTGGTTAACTTGCTGTTATTCTTTCGA
CTGTAATAATATTGAACAATACAGATTTGAATGTTTGGACCTAGCCAGGt
gggtggaggtcctttaaattaaccgaatgttcgttcgttcttcgtccgtc
cgttcgtctttgggtcaataatttttttggattttttttgtaaaattgct
tcattagtttttcctaattttttggaCTACTCGTTACACTTTGTCAATCT
CTTGCTattttgtcctatttttatctgattctcattatcaggtaggtcca
ttcagcatattgcttgtttATCCATCGTCACATGTTGAATTTCAGATAAT
GATTTTTATGAGCTTAGTATAtagtaaagctcaaatagcagatgtagaac
gataaactcggtatactgtacaatgattttttgtttctttattgTAGGCA
TCTTGTTGGAGGAGAGACAGCTTTGGCGTGTTCCAGTGATCTGATGAGAA
GCAAAACATACCAGAGTTTAGTGGACTTTGATAACCATCTAGACGATATT
ACATCTGATTGGTTAAACCCTCATCTTAATAAAGTGATCGAGTTGACGTC
GACTGGAGAATAACCCATTaggataggaaatatttaaagtaCTTTTTACC
CACTTTTTAACAATCGATACATAACTTGGCTCCATTAAAGTGTATTAGTT
TTGGCGGAACTGGAAACCTTTACCCAAACAAATACTCAAATTTTACATAA
CCAATTTTAGATATAGAAATTTCTATGAAAATTTAGTCCTGTTTTTTTAT
TACCGAGAGAAATCGTTAGTTTCTGTTAAATTGAATACCGACCAAAATTG
CATAAagttactttaggcgtagaaactttcgcgagcagaaactttcgcga
ttttcgcgaattttggcccttttcgcgaaagtaaatgtctttaaaaattc
taggaa Coding sequence (CDS) from alignment at scaffold_251:862735..867990+ >TCONS_00055197 ID=TCONS_00055197|Name=TCONS_00055197|organism=Clytia hemisphaerica|type=CDS|length=3618bp|location=Sequence derived from alignment at scaffold_251:862735..867990+ (Clytia hemisphaerica)
ATGAAAGTTTCTTTATCACCAAGAGCATACTCTAAGGTTCTCCTCCATGC
ATGTAAATACCCACATAAAGCTGTCAATGGTGTTTTGTTGGCTGAAGAAT
GTAAACACACAAGTGATCTTTTGAGAATTGTTGATACAATTCCACTTTTT
CATCAATGTCTTGGACTAGCACCAATGCTTGAAATTGCTCTTAATCAGaT
TGACAGTTACTGTAGAAGCAATCAACTCGTCATTGCTGGTTATTATCAAG
GCAATGAAAATTACAATGACAACGAtCCTGATTTTATCGCTTACAAGATA
GGAGAGAAACTTGTTGAAAACTCACAAAATTCCATATTAATGATGATTGA
TAATCAGAAAATGGATGTCGACTGCAAAGAAACTGCtctgaagCTTTATC
AAATGCAAGATAATAAATGGAAAGAAAATCCAACTTGGCATCTTGTTGGA
GGAGAGACAGCTTTGGCGTGTTCCAGTGATCTGATGAGAAGCAAAACATA
CCAGAGTTTAGTGGACTTTGATAACCATCTAGACGATATTACATCTGATT
GGTTAAACCCTCATCTTAATAAAGTGATCGAGTTGACGTCGACTGGAGAA
TAAATGAAAGTTTCTTTATCACCAAGAGCATACTCTAAGGTTCTCCTCCA
TGCATGTAAATACCCACATAAAGCTGTCAATGGTGTTTTGTTGGCTGAAG
AATGTAAACACACAAGTGATCTTTTGAGAATTGTTGATACAATTCCACTT
TTTCATCAATGTCTTGGACTAGCACCAATGCTTGAAATTGCTCTTAATCA
GaTTGACAGTTACTGTAGAAGCAATCAACTCGTCATTGCTGGTTATTATC
AAGGCAATGAAAATTACAATGACAACGAtCCTGATTTTATCGCTTACAAG
ATAGGAGAGAAACTTGTTGAAAACTCACAAAATTCCATATTAATGATGAT
TGATAATCAGAAAATGGATGTCGACTGCAAAGAAACTGCtctgaagCTTT
ATCAAATGCAAGATAATAAATGGAAAGAAAATCCAACTTGGCATCTTGTT
GGAGGAGAGACAGCTTTGGCGTGTTCCAGTGATCTGATGAGAAGCAAAAC
ATACCAGAGTTTAGTGGACTTTGATAACCATCTAGACGATATTACATCTG
ATTGGTTAAACCCTCATCTTAATAAAGTGATCGAGTTGACGTCGACTGGA
GAATAAATGAAAGTTTCTTTATCACCAAGAGCATACTCTAAGGTTCTCCT
CCATGCATGTAAATACCCACATAAAGCTGTCAATGGTGTTTTGTTGGCTG
AAGAATGTAAACACACAAGTGATCTTTTGAGAATTGTTGATACAATTCCA
CTTTTTCATCAATGTCTTGGACTAGCACCAATGCTTGAAATTGCTCTTAA
TCAGaTTGACAGTTACTGTAGAAGCAATCAACTCGTCATTGCTGGTTATT
ATCAAGGCAATGAAAATTACAATGACAACGAtCCTGATTTTATCGCTTAC
AAGATAGGAGAGAAACTTGTTGAAAACTCACAAAATTCCATATTAATGAT
GATTGATAATCAGAAAATGGATGTCGACTGCAAAGAAACTGCtctgaagC
TTTATCAAATGCAAGATAATAAATGGAAAGAAAATCCAACTTGGCATCTT
GTTGGAGGAGAGACAGCTTTGGCGTGTTCCAGTGATCTGATGAGAAGCAA
AACATACCAGAGTTTAGTGGACTTTGATAACCATCTAGACGATATTACAT
CTGATTGGTTAAACCCTCATCTTAATAAAGTGATCGAGTTGACGTCGACT
GGAGAATAAATGAAAGTTTCTTTATCACCAAGAGCATACTCTAAGGTTCT
CCTCCATGCATGTAAATACCCACATAAAGCTGTCAATGGTGTTTTGTTGG
CTGAAGAATGTAAACACACAAGTGATCTTTTGAGAATTGTTGATACAATT
CCACTTTTTCATCAATGTCTTGGACTAGCACCAATGCTTGAAATTGCTCT
TAATCAGaTTGACAGTTACTGTAGAAGCAATCAACTCGTCATTGCTGGTT
ATTATCAAGGCAATGAAAATTACAATGACAACGAtCCTGATTTTATCGCT
TACAAGATAGGAGAGAAACTTGTTGAAAACTCACAAAATTCCATATTAAT
GATGATTGATAATCAGAAAATGGATGTCGACTGCAAAGAAACTGCtctga
agCTTTATCAAATGCAAGATAATAAATGGAAAGAAAATCCAACTTGGCAT
CTTGTTGGAGGAGAGACAGCTTTGGCGTGTTCCAGTGATCTGATGAGAAG
CAAAACATACCAGAGTTTAGTGGACTTTGATAACCATCTAGACGATATTA
CATCTGATTGGTTAAACCCTCATCTTAATAAAGTGATCGAGTTGACGTCG
ACTGGAGAATAAATGAAAGTTTCTTTATCACCAAGAGCATACTCTAAGGT
TCTCCTCCATGCATGTAAATACCCACATAAAGCTGTCAATGGTGTTTTGT
TGGCTGAAGAATGTAAACACACAAGTGATCTTTTGAGAATTGTTGATACA
ATTCCACTTTTTCATCAATGTCTTGGACTAGCACCAATGCTTGAAATTGC
TCTTAATCAGaTTGACAGTTACTGTAGAAGCAATCAACTCGTCATTGCTG
GTTATTATCAAGGCAATGAAAATTACAATGACAACGAtCCTGATTTTATC
GCTTACAAGATAGGAGAGAAACTTGTTGAAAACTCACAAAATTCCATATT
AATGATGATTGATAATCAGAAAATGGATGTCGACTGCAAAGAAACTGCtc
tgaagCTTTATCAAATGCAAGATAATAAATGGAAAGAAAATCCAACTTGG
CATCTTGTTGGAGGAGAGACAGCTTTGGCGTGTTCCAGTGATCTGATGAG
AAGCAAAACATACCAGAGTTTAGTGGACTTTGATAACCATCTAGACGATA
TTACATCTGATTGGTTAAACCCTCATCTTAATAAAGTGATCGAGTTGACG
TCGACTGGAGAATAAATGAAAGTTTCTTTATCACCAAGAGCATACTCTAA
GGTTCTCCTCCATGCATGTAAATACCCACATAAAGCTGTCAATGGTGTTT
TGTTGGCTGAAGAATGTAAACACACAAGTGATCTTTTGAGAATTGTTGAT
ACAATTCCACTTTTTCATCAATGTCTTGGACTAGCACCAATGCTTGAAAT
TGCTCTTAATCAGaTTGACAGTTACTGTAGAAGCAATCAACTCGTCATTG
CTGGTTATTATCAAGGCAATGAAAATTACAATGACAACGAtCCTGATTTT
ATCGCTTACAAGATAGGAGAGAAACTTGTTGAAAACTCACAAAATTCCAT
ATTAATGATGATTGATAATCAGAAAATGGATGTCGACTGCAAAGAAACTG
CtctgaagCTTTATCAAATGCAAGATAATAAATGGAAAGAAAATCCAACT
TGGCATCTTGTTGGAGGAGAGACAGCTTTGGCGTGTTCCAGTGATCTGAT
GAGAAGCAAAACATACCAGAGTTTAGTGGACTTTGATAACCATCTAGACG
ATATTACATCTGATTGGTTAAACCCTCATCTTAATAAAGTGATCGAGTTG
ACGTCGACTGGAGAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055197-exon-scaffold_251-1491911889:862735..863100 | TCONS_00055197-exon-scaffold_251-1491911889:862735..863100 | Clytia hemisphaerica | exon |
| TCONS_00055197-exon-scaffold_251-1510915933:862735..863100 | TCONS_00055197-exon-scaffold_251-1510915933:862735..863100 | Clytia hemisphaerica | exon |
| TCONS_00055197-exon-scaffold_251-1575043694:862735..863100 | TCONS_00055197-exon-scaffold_251-1575043694:862735..863100 | Clytia hemisphaerica | exon |
| TCONS_00055197-exon-scaffold_251-1491911889:864805..864881 | TCONS_00055197-exon-scaffold_251-1491911889:864805..864881 | Clytia hemisphaerica | exon |
| TCONS_00055197-exon-scaffold_251-1510915933:864805..864881 | TCONS_00055197-exon-scaffold_251-1510915933:864805..864881 | Clytia hemisphaerica | exon |
| TCONS_00055197-exon-scaffold_251-1575043694:864805..864881 | TCONS_00055197-exon-scaffold_251-1575043694:864805..864881 | Clytia hemisphaerica | exon |
| TCONS_00055197-exon-scaffold_251-1491911889:865696..865765 | TCONS_00055197-exon-scaffold_251-1491911889:865696..865765 | Clytia hemisphaerica | exon |
| TCONS_00055197-exon-scaffold_251-1510915933:865696..865765 | TCONS_00055197-exon-scaffold_251-1510915933:865696..865765 | Clytia hemisphaerica | exon |
| TCONS_00055197-exon-scaffold_251-1575043694:865696..865765 | TCONS_00055197-exon-scaffold_251-1575043694:865696..865765 | Clytia hemisphaerica | exon |
| TCONS_00055197-exon-scaffold_251-1491911889:866081..866128 | TCONS_00055197-exon-scaffold_251-1491911889:866081..866128 | Clytia hemisphaerica | exon |
| TCONS_00055197-exon-scaffold_251-1510915933:866081..866128 | TCONS_00055197-exon-scaffold_251-1510915933:866081..866128 | Clytia hemisphaerica | exon |
| TCONS_00055197-exon-scaffold_251-1575043694:866081..866128 | TCONS_00055197-exon-scaffold_251-1575043694:866081..866128 | Clytia hemisphaerica | exon |
| TCONS_00055197-exon-scaffold_251-1491911889:866489..866532 | TCONS_00055197-exon-scaffold_251-1491911889:866489..866532 | Clytia hemisphaerica | exon |
| TCONS_00055197-exon-scaffold_251-1510915933:866489..866532 | TCONS_00055197-exon-scaffold_251-1510915933:866489..866532 | Clytia hemisphaerica | exon |
| TCONS_00055197-exon-scaffold_251-1575043694:866489..866532 | TCONS_00055197-exon-scaffold_251-1575043694:866489..866532 | Clytia hemisphaerica | exon |
| TCONS_00055197-exon-scaffold_251-1491911889:867482..867990 | TCONS_00055197-exon-scaffold_251-1491911889:867482..867990 | Clytia hemisphaerica | exon |
| TCONS_00055197-exon-scaffold_251-1510915933:867482..867990 | TCONS_00055197-exon-scaffold_251-1510915933:867482..867990 | Clytia hemisphaerica | exon |
| TCONS_00055197-exon-scaffold_251-1575043694:867482..867990 | TCONS_00055197-exon-scaffold_251-1575043694:867482..867990 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_251 | supercontig | scaffold_251:862735..867990 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR005366 | EMC8/9 |
Blast
BLAST of TCONS_00055197 vs. Swiss-Prot (Human)
Match: EMC8 (ER membrane protein complex subunit 8 OS=Homo sapiens GN=EMC8 PE=1 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 3.195e-51 Identity = 87/203 (42.86%), Postives = 125/203 (61.58%), Query Frame = 1
Query: 175 VSLSPRAYSKVLLHACKYPHKAVNGVLLAEECKHTSDLLRI----------VDTIPLFHQCLGLAPMLEIALNQIDSYCRSNQLVIAGYYQGNENYNDNDPDFIAYKIGEKLVENSQNSILMMIDNQKMDVDCKETALKLYQMQDNKWKENPTWH--LVGGETALACSSDLMRSKTYQSLVDFDNHLDDITSDWLNPHLNKVI 747
V L+ +AY K++LH KYPH AVNG+L+AE+ K + L + VD IPLFH L LAPMLE+AL IDS+C+ + VIAGYYQ NE D P+ +A K+ ++ E ++ L+M+DN K +DC + +Y+ +N+W+ H A S+ L+ S++Y++LVDFDNHLDDI +DW NP +NK +
Sbjct: 4 VKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPLFHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDASPNQVAEKVASRIAEGFSDTALIMVDNTKFTMDCVAPTIHVYEHHENRWRCRDPHHDYCEDWPEAQRISASLLDSRSYETLVDFDNHLDDIRNDWTNPEINKAV 206
The following BLAST results are available for this feature:
|
