XLOC_033555 (gene) - C. hemisphaerica

Overview
NameXLOC_033555
Unique NameXLOC_033555
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_226:565185..568887+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033555 ID=XLOC_033555|Name=XLOC_033555|organism=Clytia hemisphaerica|type=gene|length=3703bp|location=Sequence derived from alignment at scaffold_226:565185..568887+ (Clytia hemisphaerica)
GTCAACTATAAATCTTTGTTTTACACAAAAAGTAGTCTTTGACTATTTAT
TAATTACAGAAAGTTGAATCGGTACAAGTTGAGTCATTTCAGATCAAGTC
TTGCTTAGCTGAGGGTTAGGAcgttttttcaaagaaatctgTCGACGTAT
AAATCTTGAATTGCTGGAAGTTGTATCCAGTaatatacaacaaaatacag
CGAATTAGGCTTTATCATCCAAACACCTTACAAGAAGTATCACCCAAAAA
TATAGAACATGAGGAATTTATCATTATGTGTTTTTTTCCTATTGGCTGTA
ACCATGGTAGCATCACGACCAATCGAAGATAGTTCTGGTAAGTCTTCACA
TTATTACTGATATAAACCTCCGACTAACTAAATACAGAAGTTTTCTTCCC
CGGTAAACAAAACTCTTCCTTAGATTTTCAACATCGTATTTTAGCTCGTG
GTTTTGTGGGAAATCTTTAAGCGGTAATGAAACGTTCTTAATCGAATACc
aaccccctcaaaatttaaccCTGATGATTCCTCTTGATTTATTCTaatct
attttttttgaaaaacctttttaGAGCAAGGCTACCATTCGGAAAGTTTT
CAGTAATACTCCCGAAAgtgtaatttgtaatttcctcTATAGCGTCCCTT
TAAAAGAATACTCCACTGTCACAACACTACTGGTTTAAGGTCACCATAAC
TTTGAAGATATCGATAATAGTATATctttaaatattgaaataaaagaaaa
tcaacgCCAAAAAATCTTAGCCCGTTTATCAGTCTTTCCCTCTTTTGGCG
TTGAATCTTTCCTTCCTAGCATGCCTCTTTCTTCAATACATCAGGCCACA
CTCAAAGAACGATTTTGTTATAAGCTCATCATAGACCTACAACATAATTA
TTTTcacaatattgattttcagctCAAGGTGACGTCATAATGTCAGATGA
CGCTTTACAAGTCGTTTACAATGATATCTTAAATACAGCCAATCAAGTAA
ACTCAGCTACCAGCGAACTGAAACGTGCCGTAGGGAACCGGTACTCGTCT
TGTAATCCGGATGTCGAAGATTGCGGAAGTGAGAAAAACAAACCACACAT
CAGTCAAATAAATGCTGACGCTGATAAACGAGAAGGTTATGGAAACGGAT
TCAGCCCTTGGCTTCACCGTTACAAAGATACCGCATCTGAGAGGGTCCct
atctaccattttgattctaGGGCTGCCAAGAGAGTTCCAATGTATCACTT
CAAGGATGGAGCGTCGCCAGAGAAGAGAGCTCACAAAGTTCCAATGTACC
ACTTTAAGGATGTAGCGTCGCCAGAGAAGAGAGCTCACAAAGTTCCAATG
TACCATTTTAAGGATGCAGTATCGTCTAGGAAGAGATCGCGCAATGTACC
AATGTACCACTTTAAGGATGTAGCGTCGCCTGAGAAGAGAGCTCGAGTAG
TTCCAATGTACCACTTTAAGGATGTAGCATCGCCTGAAAAGAGAGCTCGA
GTAGTTCCAATGTACCATTTCAAGGATGTAGCGTCGCCTGAGAAGAGAGC
TCGAGTAGTTCCAATGTACCATTTTAAAGACACTAAAGCTGAAAAGTTCT
CGTTTTACCATTGATGAATTTTAGCCCAGCCGATGAATTTCTGCACAATT
TTATCATGTACTCACTCTGGTCAAAATGACCTAAAACTTAACGgttgatt
taaaggttttgtttttaaataagagtaatatcgtttgcttactcatcagc
tttgatttcaaaactttttcacatttgattgacacggatgtggagcaagc
tTTGTCAgagaaaggaaaagaaaaacattttttgcttatatcagaacgtg
catttaacgaaatttaataaaagaatttgtttacataatGTTTTGTAGAA
CCAGGCATGCAAACGTCTGTCATCCATCCGGAATCCGGGGgagggggcac
tcatatggtccaaCCCACGGCATTTGCCgtccttaagggtaggtttttcg
agaccctcgaaatacactgtaagggtgtacttttgatagagtacACTATA
AAGTTCTAGAAGGTTTAGAAattcagtgccccccccccccccccgggtcc
gGAATACATGCTTGTCGTAGACTATCACAGGAAAGACACTAGCCTGTACA
GTGTTTCGAATGATGTATGGGATGTTGTCTTATATCTAATTGTAGCAAAT
AGTAAGCATttcttcacaattttatttaatattataCTAATTAATGATTT
TACGGgtcttatttttacaaaatgattTCTAAATGTAACAAATTAACCCG
TCTTCAATATTCTGTAAATAGCACGAAGAAAAACAAGTTATTATGCGTAC
CTTTTCgtgcaaaaatttcaaactctttcTATTCCCGCCTCTTACCTTTA
TCCCGCACACAGCATACAAAGCTCTTATGTCTGTCTCCGCGAATCACAAA
GAGAGGATCTCCAAATTCAGCAATATAGAAAGtactgcaaaatttgaaga
atcctTCCATTTCAgtctgtgaaaaaaaaattcgacaCTTCTCTATAAAA
AATCATGAATCACTTACTCTAAATGTACCAAATTTACATAACCCgccaaa
gttttttttgaatctCACCCGGATTTCACcgatataaaaaatatacacaA
TAGCGTCAGACGCCAAAGCTGTAGCTATCAACAATCGAGTAATAATACTG
AAGACACGCGGTGGCGATGCCTCCATTACAGCGTACACAAAATCGATTAA
ATCTGGAACGAGCCACAAAGCGATAAAACTACCGACAAGTAACACAGGTA
GATATAACGAACGTCTTCTAGCTTTTGACCTTTCCGTATTTGCTTCAGCC
TCAATATTACGGTCGGTCCTTGTTATATTGTCTCTATTACTCCCGGTGTC
GTCCTTATTCCTACCATTATTATTAATATCGTGTTGGCTTTTGAACTCTA
TTCTTGGAGTCCTTTCTTCAATATCTTTTGCTATTTGTCGCTTATCTGGA
AGCTTGACAGTTATTGAGGCTATTACTGCTTTACGTTCCCGTCTGTTCCT
ACGTATTAATGAAAATAAGTAACCGTAAATAATGACGGCGATCAGAAGGA
ACGTAATTTCTTCTGACGGCCAAATATATAGAATTGTAATTCGTTGAATA
CAGCTCGAGTCGCATACGTGGCGAGTTAAGTAGAAAACTAATTGAAATAG
TATTGACACCAACCATGCTATGGCGATCGCGAATTTAGTTTTACGGGCAC
TGACTAATAACGGGTACTTGATGTTAAAATGGATTTCCAGAAAGCGGTCT
ATAGTCAACAAACACATGATTAATATGTAGCAAAGATAGGTGCCGTGTGC
GTCCACCAGCCGTATCTGTAATGCCGTATCCTTCAAATGGAAAAGATAAA
CGATCCTATACATGATTTTCAATAAGCATTTAATAATAGCGATAATACTT
AAGTTGATTAAATAATACTTCTGATTGGTGGAGATACTATTGATGCGTGT
GGTGAGTAGGAGGTGTAATCCAATAACATGTATTGTACAAGGTATAGTGT
AAATGACGATGAATGTGATTTGTTCTTCCCTAGGTGCTTCAAAGATGGTT
GGACCACTAGCACTACTCATACTTCATGCAACATTTGAGACATTATATTG
CGTATGTGAAGTTCTACAATTCCACAAGGTATGtgtctttgtttttctta
tcC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053162TCONS_00053162Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_226supercontigscaffold_226:565185..568887 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.05	0.05	0.2	0.12	0.03	0.06	1.18	1.88	2.02	1.64	1.04	1.7	0.17	0.2	0.17	0.04	2.81	3.23	0.59	0.45	9.1	9.08	1.59	3.11	3.59	4.98	0	0	0.04	0.02