XLOC_033330 (gene) - C. hemisphaerica

Overview
NameXLOC_033330
Unique NameXLOC_033330
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_219:35415..45788+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033330 ID=XLOC_033330|Name=XLOC_033330|organism=Clytia hemisphaerica|type=gene|length=10374bp|location=Sequence derived from alignment at scaffold_219:35415..45788+ (Clytia hemisphaerica)
ggcaaattttgtagatttttcactacctccagacactatatcctccacct ccCCCGATGTAaagacattttctggaagagcccattaagCAATCTCATCT TCGCTTTAGgcatgaaaaaaatgatgaaaggaAGTAAtgatttttgctgc tggttatGTGAGAGCACTGCTGCTGGGAAGGGGAAATActgaagaaaaaa caaagaaatattaaaACTAGACACCTACACTCACACTTACACGACAAGCA ACACAAGAAAATCTAAGTCTAAGAAATTATGTTTTCTAgagaagaaaaag agaaagaggTAAGATATCCATGCTCTATTACAATTAAAAGTGAGAAAATT AGGGCCAAACTAACATATTCAAGAGATTGTTAATAACAACACCCTAACCT CCTGCAATTCTAACATACCTTGTCTGATTCTGtatagcaactatctggtc ttttaaatgtttataaataaaacctTCTTAGAAAGCTGTTTCAAAAAATC ACTCTAACTACGTTGCAGACCAGACAGTTGCTGTGAaggaattagacaag gtatgtccTCCTTTGGGAGAGCGCGACAGtgttttgaataactaattact ccagcataaattttgatttgtctTCTTCAAGACAGCTGGGACAAGATGAT AACCATTTATACTGGCTGAGGAAAAGTGGTGTATGCTGGAGTTGCGTTCT CCTAAACAAACTTGCCATAATTGATCTGCTCAATACTGCtcaatattatt tttcatgTCGTAAAACAGCTGTAAAATTCTCGGGTACCactgagtggttt catttttgacTTCAAGCCAACATTttagcaacagggtgcttgCCCATATG TACAGTAAATCTCAAATATTGATTGAACCAAtggaaaataaaacttttca ctttAACTATTTCAGTGGTCTCCCGGTATAACACGTTCTAACATTTTACA TTTGACTGACATTGAGCTGACAGGGTGATAATTTTCTACTTTAGAGCGTT TCTTATCCCTACATACTTCActgttttcacaaaatttcaaaaagaaggGA AAGTACGTGACAGAACTGCTTGGTattttttatagtatttttctTGGGAT AATCTCAATGGTTGTTAAATACAATATGGACAATTTTCTCAAGCAGCAGA CATTGCTAGACAGAAAATATTATGGGGAATTGTTATTTCATAACAGGTGT GGTTATgtgtaataatttttttttcataaaatgggCTTTAGTTTTTtgat tcaattatttttcaactttttttcagaaagaaaaCAATCTTGCACTGATC GAAGAGCTTCGAAGAAGGTTGTTGTCCAGAGGTAATTCATATTCTCTGCT CATAATCCTAGAATTAGAATAGAATagaactagacggttcccgtcgtcgc aaacgccggttttTTAGCTTGAGAATCCAAAGTCCTTAGGATGATAAAAA TGGTGTTGTTGATGCTCTCAAACTCTAACTCAAGGGAGAGAAAAACAGAA GCCTAGCAAATAATAAACCGTCAATGAGAGTTTTTTTCAGGAAGTTATGA TTTCAATTTAACCAAGAACGGTAACTTATCGAACAGTAAAACGGCAAGTT AGAGAACGTCAACTGTACATTGTATATCTGCCCCTTTTACTAATTTGAGG TTAGTTGGCGCGCCttaaaagaacaaataaataaatattttgatttcaaa acaatcataGACATATCGAAACTTACGGAAAAACTTATATCTTCTTCTCG CCCGAAAGACCACCGTCTTTTACCTGTACATTGACTTTGAAAGCTCATTT TTAGAAACTTTCGTAGAAAGTGCCACGCCTTCTTAATTCAAAAAACTTGC AACGACGTCATATTATGATCCTTTGAATAATCTTAacttaggcggccgcc taatTAGTCAAtctttgtatttttatcatCTCAATTCAGGCGGCCGCCAg ttttatcatttcaaatttcaaaacaaacaacaaacatgGTAGCCATTTTC CTTTGCTTGCTTTTGAAATTCCTCTGCAACTTGATACaccattttggtat ttttgtttactttattaCCACGTGAAACAGAAGATAGGCGGCCAACTCTG GCGGCCGCCtaagatttaacaagttaggcggccgcctaagaTTCAAATAT AAAATGCAGACCAGAAAGCTAATTTGATGACCATCCATCGATaagttagg cggccgcctaagaTGACAGGCAGTCGCCTGACTTTAACCGCCGCGGCAAG ATAGGCGCAGGGATGCCCATATCAGCCACGGTAGCTTAAACTACAATCTC TTATTATTACTGTAttatttacttcgtacattacggacCGAAAACAATAT TGTCAATATTATGTTATGTAGTGTTATGTGCTCTGTTAATTTCATCAATT TATTTCAGGTCCTGAACTTCAAGATTTTGATGAAGAGGATATTGAAAAAG TACAAAAGAGTGATGGCTTTGTGTGGCAGTTCCTCATCCACCAACATAAA GATATTGATAAAGCACTGGAGATGATGGTAGGCTTGTTTTTTTCAATCTC CTGTTAATTTATTTCTTGTTTTTAGGAATCTTTGTAGACAAAAAATGAAT CTGTAATACAAGGGACATTCTGAGAAATTGTTAACCACGATTGCCCGATT GAACCGCCTCTAGGCGTTCTATCAAATGGTGCATGGGTCCCATTACTCCT AGGTCCTTACTAGCGGTATCAAGTTAAGAATGAGTGTGACGTAAACGTAC CCCTGCAATGTCCGAATATAGCATATTATCAGTCCAAAACCACcagcaat attttttacttCCTTGGAACAAACGCCCAATTAACATGTtacttttatat atttttactcATTAAATATTCTTGCTTTGTAGGTCGAATGCCTAAAGTGG CGAGAAAGTTTTGGATTGAATGGTAAGCTCATTTTCTCATCATAATCACA GAAAGATCAGTGATTTTCAAAGGTCACATTTTCAAGGAGAAAAATCGAAA CAATGCCCTGACAATATTACTATGTTATTGGTTGTTACTATAACGAGGAA CACGAAGTAATGagaagtaacaagaagtaacgagTGCTTAAATGAAAGTA ACGAAGCAATTGTGAAGCAATCCGAAACTTTCCAAGAAAAGGAATATGAT tgattttgttatgttttttagCTCTTATATGATTTTCTATGCCCTACAAA GATAGATGGCGATCAAACAGTAGCATTTCAATCTAAAAAACAGTTTTGTT AAGCTCAGAGTGCCATAAAGAAAAGTTTCAAAGTTTGAAATGGTATCGCA TATGAACCCCCCTATGAAAGCTTGGATAAAGAGATAGTTCTATGTAACTT TCCTTAATACAACACGAAACGATTACACAACTAGTGCGACTGTGTCTTCT TGCtaaaataagttttaaaattgatataaaagaGTAATTAGAGCTAAGAT GTGAGTGAAAATAAACAGAAAAGGCTCACTTTGCAGAAATTTGGACGTTG AGAGTTTCAAAACATTCCACTTTCATTTTTCCGTCTCATTCTATGAAGCG TTTTAAAAAACGAGGCATCGTGggtactttttttaaaagttcgCAACGCG ACCAGTATGTCTgagccaaaaattgaaaatggatACTTAGAGAgtgaaaa aatttgacattttatggacccttagagaaactgttttcaaaagttttgtc gattttccccaaaatttggTCGAAGGTGAGAGGAAGAATTTCGTGATTTT GTAAACCTTTTAGAGAAAAACATATGATGAAGTACTCCTTTTAAAAGACT TTAGATACCCTTTAGGCCTtagtacccttatggctcgcacaaaCCCGTTG CACGTTTTGTCAAAGTACGGCGGGTGGGGGGGCGTGAGATTTTAAGACGA ATTTGACAAAGAATAAAAAACGAAATAAACGTGTCCAGATTCGAGTACCA AAATGGGCCAAAATGGTGACGCcatcaccaaaattgacaaaatctaatta ggttgatttcaaggcattattgtcaaggtgtcaCATGCCATATTAGAAAG GAAACAGACAAGCTaatcacgagatataggtgCCCGAAAAGTAAACctag aaatgacgtcataaatcttattttaaaagaattgaCTGGTGACAAAAACA AGACAATGGAACGTCAAATCCGTGGCTAAAGTACTCATTGCTTAGGTCTG GTATTTATTTGTTACTTCCATTTAAGCACTCGTtacttttcgttattttt cgtTACCTACTCTTTACTTCTTGTTCCTCGTTATAGTAACAACCTATGTT ATTACCATATTACTGGTGAGAGGCAATAAATGATCATCATTACGTTCTAA ATATTGATTATCACGAAGAATTTGGCTTTGCAAACTATTTTtcaaagtcg agatatttaagTTACCAGTTTTAGGATGAAAACAATAGGATTTtaacgta agaaccgtgtaagaacccatgttcaaaaatttgatatctcgattttggaa aattgttacacaaaaatactttataGTTTTACTAAGGACCATAGAAGGTT TCTGTAATCTAAAtatttcaaaccatctgattatccctttaagtgtTGAG CATAAAGCAGACAATACCGTTTTGTACTAAGTCTGAAATATTTGACATGA CCCGACTGGGGGATTGAACCCGCGACCTTGAAAATCGTAGTTGAATGTTC TACCTTTTGCAATACAGCCGTCCTGATCGTTCAGCATTCGATATTCTTAA TCTCTTAGAAATCACAGAGAGGAATATTGATCGACACCTTTTTGAAATTG GTTTCCTTTTTCCAAGAAATACTGACAAAAATGGAAATCTGTTACGTATG TTAATTTATTCTgtaattttaagcctaattcaATTGCTATGAATCACCCA TTGTCCATTTTCTTGCTCCATTTTTTTGGAGTTATTCATTAAACAGAGAA TTGTTCGACTGTATCGAAAAACATCATCTTCTAAACTACTCACACTACTC ATTTGTACATCCGGTCTTTCTACTCCCATCAGTCTTGTAGACTAAATGGC TAAAGTTTgccattagtttttttttataatggcaaGATaatgaaagctct ttttattTAGTACACTTTTTGGCGAATCGTTATCGTAAGGAGCTGTATAA CATTGAAGAAGTCAAAAAGCTTTTTGCTTTCGCTCTTGAAAAACTAGTGA GTGCCCTTCCGAATTAATTTTGACCATCGTCTGCTCCTTCTTTTActact ttatttttttgaaaacatatgACACATTTTCTCCTTATTTTGGATTTCTG TTTTATTTAAGTTATTCTACATTTATTTTACTTCAATTTAAACAAATTGT CTTCCTTCCACCCATTTTAGTGTGAAAATAATTCGGGTAAGAAAGTAACA ATGGTTTTTGATATGCAAGACGCCGGCTTTGCTAACATGGTAAGATTCAA GAAGCTTTGAACTGACTCCTTCTTAATTAACTCTTACTTCGCCAGGCAGA GATTTAGATCTGGATCCTATGCTTTTTATTTAAGTTTTTGGTTCAATACA AACCCAAGGGTTGAATTGGAAGTAATTTcgtcaaaaatcaatgaaaaggA CCGACAATTTGGGAATTTTGGGGGCCATATCGGGCTTTTTTATCGATTAC TATTATTTAATCCTTTGAGCGACAAAAAGTTCGTTACCAGTTTTTCTCAT GATTGGGTCATagaaattttctgaattttggcACAAATATGTATAATGAA AGTGCCGAAAATGTAACAGAGCTCGATTCCAAAAAGTTTTTGGGTACATT TCGGCCAAAATATACGTTTTAAAAAACGGGTTATTTGCCTTTGTGCAAAA TTGaatcataaatttttttctgatcttttgtatgaaagtaCCGTCGTTTT GCATAAGTTTCCATttcccgcactaagattctccTGACTTTCCTGAGATT TCCCCTGTTCTGCCGGAGATAACCAGAATGGCATTCGAAAGGGTTTTTTT CTaaaggaaaatcttgtgtttatgAAACTGCCAAACTTTCTGAAGCTTTT TTTAACTATCCGGAGTCATGTTCTTTATCTGATAGAAAAGCGGCAGTGAA ATCTTGTAGCCCTTTCGATTGAGAAACTTATTTACTATAATCGCCAGCTT TGccaaatccaaaatttcaatgtcaaaagatcacagtATTGTGGCAAAAT CCTACACCGCTACGCCGCCATTTTCAAAATCTCTGCCAAAAGTGCCATTT TGGCGTTCGAAAAGCGAAAAGGACACAGGTctcgtgggaacagtgttttg tatggaggtaagttccaaaatTGCCAAGAATGACAGATTCAccacatatt ttttatttggcatttatgtttcaaaaattttgccccaattgccaaatttt tgccaatcgaatgcaaaataattggcaacCAGGGCAAAATCGGCAttttt tgaagtcaattcaaTTGGCTGTTGGCGTGGGAAGAATCTTATGCAAATCG ACGGTAGTATACAGTCGTGCGTAAATGGTGGTTGAAGCAGATTCtcccaa caaaaaaaaaaattcggcttaaaaattaacttttagCTATGGTAATCGCT ATGCCTAAAGACCGTTCTATTTAAGACCTATGCACGGTGCTGACAAACGC GACGCAAACCAGTTCGAATAggtttgtggagcaagaactcAATAAACGAA AAGTGCACTAAAGTCAGTCCCAAAAGTTTGTGGATACTTTAGTTTTTTGA CATATCCCCAGCATCAATCATGCTATAGTAgaaagttatacaccgttgga aagatatttccaaaggaaatgatgtaaagaataagaaaaagaaaaatgaa catggagaaaataaatattttttctactcTTTTACAAATCATGACATGAA GGATTTTAGAATATTTGAATCTTGCTTATTTCAAATCTGTGCTCAGATTT TGCGTATCTTTCTCGGATAAAAAGTTACAGCTCTTTGAGGAAGGTCTAAA ACGgccaaaaatgatcaaattcacagtgctgtaactttttttctaagaaa ggtGCAAAAAAAACTGAACGCAGATTTGAAATCaacaatgtttaaatttt ctaaactaAATAGCCTTATGTCACGATTTTTAAAcaagtagaaaaaatct tcatttttttcattttcatttttcaaaaactttttatccttttaattatt ctccttggaaatatctgtccaacggtgtataacttGTCAATATAGCATGG ATGGATGGTgagaaaatgcttaaaaacaaaatttattcaCATACTTTTGA TACAGACTTAAGTATTATTGTAAATGAGGTTTTTTTGCTGCAACTAAATA CTTTTCTGTTGTTCTAAAATCATTCTCACTTTTTTATATCATATAATACA TATATTTCCAGGATATGGATCTAATCAAATTCCTGATCACTTGTTTCCAG ACTTATTTTCCAAACGTTTTAGGtaaaccttttcttttcttatgcTATCA AAAAAGTCTCTGGATAGGAAAATAACGGCCAGGTCCTGACCATGTGAAGT TACAAATCCAAGAGTACTAGCTATTAGCCAAGATATCAACATTTTTACTA TACTACTGAGAATTCTTTCTTTCAGAATACCTTATCGTCTTTGAAACACC TTGGATATTGATCAGTAAGTATATGATCACCCTTTGTTTTTTGCCCCCCC TGCCATAATGTTGCTATAATGACAACTTTTTTTAATGAGTCAGTAAGACG TAAAAGACTGAAGATGGCGACACGAATAAAAATCATGTTGtagtttttta actttttcagcTGGATGGAAACTTGTTAAAACATGGATGAATAGTGATGG AATATCCAAAATCAAGCAAGTGATCACTCAATTCCAGTTATTTTGTTGTG ACTTTAACGATTGCGTTGATCCTCTGCTTTGTTGCTTGAAGAAATATTTT CTGTAATCCTGTATCTAGCCCAGGCTGAAATTTccttttgttattctttt tgtTTAATTGCTCTGGTTTCTTTGAAATTCATACATCGCCGTCATCCCAT GAAttgatttttcctttgttaCAACAGATTTGTGAAGAAAAATGAGATCA ATCAGTTCATAGCTCCTAAAAATCTTTTATGTACCATGGGAGGAAAGGTA GGGCTGGATTCTGCGTTTGCTCGATGAGGTTTCCTTCTGTCTTCGTCAAT GATTTTCATTAGTTCTTACCAATGATTTTCATTTCAATCTCTGAATCTAG ATCTTATTTGTTTTTAGGATGACTACGTCTACAAGTATCCACCACAACTC TTCACCGCTAAAACGCAAAATAACATGTTGGTCTTCAAATTATTTACTGT ACAAATCTTTAAGTCAGCAATTGCATCTGTACATTTATTTAacgggagtt tctaaacgtcgaccagaaatgacgaccacgaccagcgaccagataaagtt ttttccctttctccaacgtagagtgtctctCCTAACCATTTAAATATATA TcatattgaagagtaagctcacccctgtctctaCTATCATCTATTTAAAG CCACGTGCTAAAAacgtaaaacaaccatttcgacgctcttggagcttgat tatggtgtcgatttatatccttttgtattatcagcatcaaaataattagt ggcacaaacttttttgaaataggTTTGAGAAGCTTTGCATTTCATCATCA CATTattatttctgtcgaaattagtcattttgtcagcataaagacaatag aataattgattagattcatatatctctaaaactggccttcccaatttttt cctactgacaagttctatctattcatactaaaggcatctcattcagtATA GTTAAAATATTCGGTGTAACAAAACTTACAGacatcatacttaatgaccc tgtcaatatttttgtcaaatagtgtcactttgtcaagaaaatgactggtt tcttcaaaggtcactttttagtattctgaggacttgatttaaacattctc tacggtggagagagcagataaactcgataatccaaatttatttggtcgcc ggtcgtggtcgctggtcgtggtcgccatttctggtcgatgtttagaaact cccttatTTAACTGCAACTGTCTTTAAAATTCCTCGGCGTTTCCCGAAGT ATTTATTAATGTCTTTGAATTCGGCACTAGCCAGTCGAATTGTTCACGGG CAAGTATTgatttttactttaactttcCTTGTTTTTCCAGTATTGAAGCA AATGGCGTCTCTTCCAACCATCTTACGGTCAACCAGACAGACGTGTTCAG TAGCATTTCATTGAATTTTGATGATAAGAGCGTCATTCAACAAcagcagc aacaacaacaacaacaacaactttcTGATGAGGCTGCAAACAAAACTAAT TATTCAAAAATGGTATTTTGCCGTTatacttgttttttttgtacTTTATT TAACACTAAACATCTGTATCATTCTCCGCTAAATTGTAGGGAGTAGATAA GGGATAGGGCCTCCTCCAGGGTTAATTCATAATTTCAATCAACTTTTTAA TTAGAATTTTTATTATTCGAAACTTTCTGTACTTTGTACTAAAATATTGG CACCCGTCAGTTGGAAAATCGTATAAAAagctctcgctaattcgaatccT TCTTTAACTAGAAAATAATTCTTTGTTCTTTGAAGATTGAATTTGAGAAA GAGGCAACAGTAAGTAGATTTGGGAAGATTTTGCTGTTGTCATTAGTTTT TCGGTCATTTAATTTTGTCGGTTTCATCATTCCCACGTTACTTTTTGGAC TTACCTGGAGGTCCtgtaaattaacctgtgttcgtccgttcgtctgttac caacttttcatGGGATTGAATCAAaggaattttgtgatttttggtgCAAA ATGATGAttaccaaaatgtgacggagcccgattttcgaaaaaaaaaattt tgtgaaaaatctgttcattagtttttccattttttttgtacaaagacgtA GAATCTGGTAGAATTACAGTGTgctaaatatgaaaaagaataatttttcg aaaaaataatttttggcaccaacttgcaaaatttcaaattattcagTTTT TGTTTCTCCATTGCCTTcattaaacttttattattcgttttataaacagg taggtccataaaagtatcgcttgtttgcCCATAATTCTCAAAAAAAGGAA GTGAAAAGATATAGGAAAGCACGATTTCAAAAGATGCACGATGATCTTCT TCATGCTACACAAGAATATGATATTATTTCACCTAGGACCTCATCTGTAA TGTTTCTTTTATAGATTCCATCGGTGCAAACAGAGGATGGTGAACCCATC GTCACTATCATGTAAGAATTTAGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052726TCONS_00052726Clytia hemisphaericatranscript
TCONS_00052727TCONS_00052727Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00052726-proteinTCONS_00052726-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_219supercontigscaffold_219:35415..45788 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
17.23 15.28 6.39 4.55 18.66 14.58 21.49 24.17 16.43 17.32 11.64 15.81 12.24 12.22 13.61 14.15 9 10.42 7.8 9.87 8.97 9.94 15.52 16.84 6.16 10.47 7.18 4.97 15.58 14.59