XLOC_033268 (gene) - C. hemisphaerica

Overview


Name	XLOC_033268
Unique Name	XLOC_033268
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_218:897252..903908+

gene from alignment at scaffold_218:897252..903908+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_033268 ID=XLOC_033268|Name=XLOC_033268|organism=Clytia hemisphaerica|type=gene|length=6657bp|location=Sequence derived from alignment at scaffold_218:897252..903908+ (Clytia hemisphaerica)
TTTCGAGCTATTTGTAGTTTGACCACGGATCAATTAAAATCCTTTTTACT
CAAGACGCGAAGCGGTAAAAAAAGCTCACAAAAACACGATTTCAACTAGC
AGAATCCAGCAACTTTCTGAAATTACCTCGTAAATAAATCCTAACAATGG
CTTACACAAGTGGAggaagcaaaaagaaaatttgttacTATTATGATGGT
AAGAGATTGTACTTTTTACGTTAATAGTTTTAGCCAAGGTTTCCACTTTT
TAGACAGAAGCACATCTGGTATTTTTCTGGCAgttagagtcccctgccca
gttggagACCGgtccagttggcgaccgaacgtctttgaacctagaaaagt
catacaaaaacaaacctctggagaatttcttttggtagtaatctgccttg
acctatttcccgtactgtgtaaaaaaaattctagaaaagaACGAGTAcaa
tccgaaagatccaactttgcaacgacccacggcatggcccgaacatgttc
gggcctgttcggaccatgctcgggccacaaaaaagtatcattgaatcggc
ccgaacattttgttcggaccatgttcgggccatgtatttacaattaGCTA
TCATGTCTTTAAAGGAACATCATAGGAatagtagaatttaattttattta
cctttcctggtttatcatcatccattgttaaatattttcattagacNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtgcttcgaat
aggagaagaccacgagaaaagggaacgggataaagaataaaaagaagacc
atattatgtaagattcaaatcattctttttaataattttccaaacttaat
tggaaaaatgatgattaacttttatattagaacaatatatatttgaataa
agatgaagatttttaaatttgtttgctaaaataaggaatttaaaatataa
atattgggtcctgaaattacacccGCGATCGTAGCAAGTATTTNNNNNNN
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NNNNNNTTGACGGTAGccatcaaagcagcaaaatctCCACTCtcctactc
taccatttttgttttgagataactttgtattttaatgaccagccaggtca
ttcatttgagggctatccATTATAGCCTCAACTGATGGAAGTTACCCGAC
CTCACGGtacattgggaaattccctaactgcaattgcgcacatgttaccg
tcaactgctctaacatgggactatctgacaaaagatgggcagtgtagacc
taactcttcatacaaaaattacgggaaacacatatttggactttgtaccc
tatgctgcacgccaGCACTTTAAAGCTGAAGTCCCGGAAAAGCGggataa
aaatcagttttttgcagtttgcaaaaaaatgccacatagaagatctttca
aattcagtatgtgaataaatagagcagtaaaaaatacaacttttctattt
ttccttttttttgcaaaagttctagaaatgaaaataaaaggataatgata
attgaatactatccactgatgatccgagGTGCCATCgcaaagctagaatc
gcttcgcgtactcttcgcttgagaaaatgattgacagattaaatttTTCC
CCCACGCGGGAGTTCGCGGGCGTTCTGCGAGCGGTATGCGAGCTGTAtgc
gagcgttctcggctcaatcctcagaccgtgttaaaaatggtagactcagc
tgtgacagatcatttcgatggaagttgttggtatgtttacaagactcttg
acagaaaatcttttgttttattgtcaatgatgacagtgccgttattaatt
ttgttagatctgatatattgatgtttgtaagtgcactttatagttttgat
tcccatttgaagaatcatattctggttttcatgttattagatgctgtttt
agagctttagagagCTACACTGATGGGACGGCAAGtcggccaccatttca
tcgaacctccaaagtcatttgatttgagttaaggaatggcgtatttaaaa
atacacgatttctctttcgattttacagtaagtgaaaatacagaccagat
atgcaacagtcccatgttttgaccaatcgtcccaaattagagcagttgac
ggtagcttttttaggcttatgcaaataaatggatAGAAACATCTAATTCC
TTCTTTCCAATTTAATCACACAAAACGCTCATAAAACGAGAAAGCAAATA
TTTTCAGTTCTTATTTCAGTTTATGTTGATAAAACAGACACCCAGTTCAT
GCTCAAAACTTCCTGTTTGTGCATATTTTTTTATAGATATGGTTtttgca
gaaaatgtttttgagaatgCCAtggataataaaaataaatggtttttaca
attttaaatgCTTTACACACTTAAGTTTCACTTtgtgaatatttaaaaca
tagtaaaaaagtttgataatttATTCTTATACTGTAACCTTTTTTATGGG
AATTCTTTAATTTTAGCAAATAGAATTCTAGCTTGGCTGACAaccaaaca
aaaacttttcatgttgaGTTTTCTCTAGTTTGTTACACTACAAAATAATT
AACTAGAAATGTTTACATTATAGTCCGGCGGCGAAAAGGGCCTTTTTGCA
TCAACCCttacaagtagtaaatatgggtttttattttattttctcccttg
ggaccccaaaaccggtttttgtCAAGCTGGCAAAgcgggggaaaattttt
tatgggggcttgaagtactatcgattagaggggtcatttataaggtttcc
taggctagatcatgagatatttgagtttgaaattttgctgattaagcgtt
tttcaactttttagcccttttctgctgagtcagcaaaatttcaaactcta
atatctcatgatctagcctaggaaaccctataaNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTGGTtgtaaaaatc
gaatttttttatttggggaaattcctttttgctatatttagggaaaatga
gcctaacatgggttttttggactttggggAAGATCACCTTTTATCATCAA
TACAATAAAATATTCATTCACCCCAGTATCTACGACTATAAGTCATACGA
CTTTAACTATACTTCACAGACTGTTGATATTAatttgagctgtgatactc
acgataatctattcaagctgctcactacAGTTTTTTATTCTCTTGCTAGT
TGTCCTATCTTTATCTGATTCTCGTCATCAGGTAGGTCctttcagcatgt
tgcttgttgtttttgtatatacATGTTTTTACCTCAAAAGTTTTTCTACC
AAAAAGGTAGAACTTGGGTTTGTTGATTGAGCTTCTTAAATAAGTACTGG
CGTTAAATTACTTCAATTTTAAGTCAATTCTATGAGTGCTTCAAAAAACT
GAGTTTTGGGATCGAAAGCCAGCCAGCTGGGTGAGTTTTTTTGGTCACCC
AGTGATTATTTTACTTTCATtgaagaaaagttttatttcttGCAGGTGAT
GTTGGAAACTATTATTACGGACAAGGCCATCCAATGAAACCTCACCGTAT
TCGCATGACacacaatttacttttgaactATGGACTTTATAGAAAGATGG
AAATCTACGTAAGTATTTGAGTATTTTTCTATCCTGTGTCAAAGGTTTCA
TGAAACTAAAAATTCGCTCACTGTATTTGCAGCTCATGGCCTAGAAAAGC
AGCTAGCAGTAACTCTCTTTGCATTAAGTACTTCATTACCTATATAAAAA
ATAGTTTAACACTcgtgttttttggacctacctggaggttctataaatta
aaacctgtgttcgtctgttcgtctgttaccaacttttctcgggattgaat
catagggattttgtgatttttggtacaaaggtgcaaaatggtgaatacta
aaatgtgatggagcccaatttttgaaaaaaaaattttgggctaATTTGGG
CccaaaaatgcctaaaaatagggttttttggacttaaaTAATCTGTTCAT
TTGTTGTTCCTAATTAACAGTGTGCTAAACATGAaaaagttcatatttat
aaaaaaaattttggcaccaacttgcaaaattttaaattattcagtTTTTG
TTTCTACATTGCCTTCATTAAGCttttattatttgttttataAACGGTAG
TATCGCTTGTTATGTTGAGAAATCACATTCTTGATTTCTCTTTAGAGACC
ACACAAGGCTTCTTTTGAAGAAATGACAAAATATCATTCTGATGATTACA
TCAAATTTCTACGAACAATTAGACCAGAAAATACTTCAGAATATAACAAG
CAAATGCAGAGATGTAAGTTACAAATCATCAAATAATTAACATGTTTGTT
TTCAAGTTTCTTGTAATTTCTTTGAAGGGctgttattatttatttttaaa
agagtAT

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00052651	TCONS_00052651	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00052651-protein	TCONS_00052651-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_218	supercontig	scaffold_218:897252..903908 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
285.52	260.13	535.51	495.38	499.46	426.11	181.87	186.45	89.02	104.37	100.96	89.47	105.05	99.65	91.75	95.15	121.46	116.23	32.19	35.19	75.38	78.17	132.66	144.28	139.26	159.91	59.96	44.15	75.75	75.38

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XLOC_033268 (gene) - C. hemisphaerica