TCONS_00052651-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052651-protein
Unique NameTCONS_00052651-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length101

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052651-protein ID=TCONS_00052651-protein|Name=TCONS_00052651-protein|organism=Clytia hemisphaerica|type=polypeptide|length=101bp
MAYTSGGSKKKICYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYR
KMEIYRPHKASFEEMTKYHSDDYIKFLRTIRPENTSEYNKQMQRCKLQII
K
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033268XLOC_033268Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052651TCONS_00052651Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003084His_deacetylse_1
IPR023801His_deacetylse_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004407histone deacetylase activity
Vocabulary: Biological Process
TermDefinition
GO:0016575histone deacetylation
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016575 histone deacetylation
molecular_function GO:0004407 histone deacetylase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003084Histone deacetylasePRINTSPR01271HISDACETLASEcoord: 64..82
score: 63.77
coord: 31..48
score: 81.62
IPR023801Histone deacetylase domainPFAMPF00850Hist_deacetylcoord: 29..93
e-value: 7.7E-7
score: 28.8
IPR023801Histone deacetylase domainGENE3D3.40.800.20coord: 8..99
e-value: 2.3E-23
score: 82.2
NoneNo IPR availableSUPERFAMILY52768Arginase/deacetylasecoord: 11..94

Blast
[Close]
BLAST of TCONS_00052651-protein vs. Swiss-Prot (Human)
Match: HDAC2 (Histone deacetylase 2 OS=Homo sapiens GN=HDAC2 PE=1 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 5.067e-57
Identity = 82/94 (87.23%), Postives = 90/94 (95.74%), Query Frame = 0 
Query:    1 MAYTSGGSKKKICYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKASFEEMTKYHSDDYIKFLRTIRPENTSEYNKQMQR 94
            MAY+ GG KKK+CYYYDGD+GNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA+ EEMTKYHSD+YIKFLR+IRP+N SEY+KQMQR
Sbjct:    1 MAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQR 94
The following BLAST results are available for this feature:
BLAST of TCONS_00052651-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HDAC25.067e-5787.23Histone deacetylase 2 OS=Homo sapiens GN=HDAC2 PE=... [more]
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