XLOC_033260 (gene) - C. hemisphaerica

Overview
NameXLOC_033260
Unique NameXLOC_033260
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_218:691115..699237+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033260 ID=XLOC_033260|Name=XLOC_033260|organism=Clytia hemisphaerica|type=gene|length=8123bp|location=Sequence derived from alignment at scaffold_218:691115..699237+ (Clytia hemisphaerica)
ggaGCATATTACTGACTGTGATCGTCTACCATTGTGTTGTGATCACTGCT
CAGTAGCAGATATACCAAGAAATGAAGTTAGTACcaaataattcatgata
tgcaccatttgCAATATCCTCTGAGAATatagacccaacagctgattggt
tgcaagtgacgtattgactgatttgaCATCATTTACAACAAATCAGCTGT
TGGTTCTATAATGTAATGTTAGTTAATGActttgcaatggtgcatatcat
gaatactgtGTTTTATTTAATTCACTTATTGTAACTGTCTACAGACTAAA
TTTGAATCATGTTTAATGAAATTCTAATTGGTAATGCTGAACACTATATG
GTGATAATATTATTCTCCAAATTTCAGATGGAGACTCATCTTACAAACTG
CATGAAAGTACCGCGGCCATGTCCCTTTCAACCAATTGGCTGTGAAGAAA
AGGTATTATTATTGCTAATATTGAATTCATTTTCGTATTTGCGAAAAGTG
AAGAATCGACGTCAAAATCGCGTTTTGACGTTATTTCCGGTCGATTTAAT
CGAGTTAGTTACGTTGGGAAATCAACTATGTTCACTTAAAAGTCCTCTAT
AtcgttttttgagagctttcgattgGTATAAGTGGTTTCCGGTTTTATTG
GCTaatttcgtcaaaatttagCGGTCAAGGGGACGCCCctgtgacgtcag
tttttgaGTCCTGAAAAAGGCCTTAGCACAAAACCCTCTCGCGAAAAACT
CTTTATGCTTCATTCTTTGAAATGGACCAGGTCTGGTTGCTTCGCATAAA
TTATGTCACGGGTCGAAAGGGTTTGTCCCCTACTAACGGAGTCtttattt
ttaaagataaatgATTTTATTCTTCCATATCATGTGTAGTTCGTTTTAGA
AGAACTACCTCTTCACCAGGAAAGAGCTAAAGAAAAACATATCGCGCTGA
TGGTTCCAAAGCTGAATGAAGTCCACCAAACAATTACTACACAAACCCAG
CTCTTGGTGGAACAAGGTCAACTCATCAATCACCAGCAAATTGAAATAAC
GAATTTAAGTGTAAGAATGGCTTCTTATCAAGCCGATATAGGTGACCAAG
CTATGCAGATTCGGCAACTTGAAAACAACAACGCTACAAAAACCCAACAA
ATCATCGCTCATCGTAGAAGGTTAGTTGAACAAGAGAGAAAAACTGCCCT
GAATGAACGAAAGCTTCtagagaaagaaagagaaattaATTCATTGAAAA
CCAATCAAGATAACATTTTGACTAGGTTAACTTCTCTGGAACGTCTTTCG
GATCGTTCTTCTATGAAGAATACACATTTCTGGCGTTTCCCGGACTTTGT
TGCAGAATGGAGACACGCCTACGCAAATGGCACTTGCTTTCAAAACCGAT
TTGTATCTCTAGCTGGCTATAAGATAGAAGTTCAAATTGAAGCTCAGCCT
GATAATTCAGTGAGTATTTTTGCACGTACTGTGAAAGGTGCTTTTGATGA
TTCTTTGCCATGGCCTATGAATTTGGAGATGTTTTCATGTGCCATTATCG
ACCAGAATTACCAGACACAAAACAATCACGCTATTGGATTGGCTGATATT
CAATATGCTTTTCGAAAGCCGCCTCATCGAAATTTGTCCCAAGGCTGGCC
tcgatttcttcgctttgcggaTATTCAGCAATATATTCACCAAGATGATC
AAGCACTCATTATCAGTATAGATTTAAAGTTTTGCGAGTAACATGACTTT
TACATCGGTTATACAAATTTACTTTACAACCTTATATTATTAAACAAACG
AAAACAGCTCCTAATGTCAGGTTCGATTGTTTTGTAGAACCAAAATAAGA
CATTACTTTAGTacattcttgatatttttccaATTGTTGCTTTTTGAAGG
TATATAAAACATATAAAAACCATTCCAGTCAGTCTTCTTTCCGGCCTTAT
ATATAATTGGACATCATCGTCCAAAATTTGGTGATGAGTGTATTACTTAT
AGTATAAATCTTTATCTATCTTTTGATATAATTCGAATAGATAGCGGtct
tgtgcttgttgaaaagataaaatcAGGAAGGGaatatcataaaaataaaa
agacatcaaaaaagttttttgaaaatgaataagTAAAAAATCAGTTTGGA
AACgacttgatttttttcttttgtagattgatatttttcttcatCGTCGT
CCTTATTTTccgatatttttttattcatttatattccagtaatattccac
tcctgaatatcttttcaataactAAAAGAccactttttaaagattcgGAT
TCTATAGATGTTACAATATTTTTTGTTACCGctgaagattttttttgaca
TCAGGCTTCAGGACATTTTTTTAATACatatttttcattattattttgtt
aCTATTTGAaggattgtaaaaaaaattatctttaccAGTCTTCTTTTCAA
TCTTCACATTAGAACGTTTAAAAGCCAAGTCATAATTTCGAGAACATTTT
CTTTGGCCAACTCAAAAGAACTCTGTCTCTTTCGATAGTCCCTTTTAGAA
TCAGCCCAATCAAAGCCTCAACCCTTGATATAATGAAATATCTCGCATgc
acttgaaattttgaaagttctggAACCTCAACAATTTTGATCTTTATTTA
CAGTGATTGACTAATACACTCTATTAGAAACAAAAAATGGATACTAGCAT
TGGTGGTTATGATATCGAATTTGTCAATGATGAGCATGATATAACTTGCG
TCATTTGTTTGGATGTTTTATGTCAACCTATGCAAGCAGTAAAGTGTGGT
CACAGATTTTGCAAGAAATGCATGTTTGGTTTGCATAGAGTGTAAGTAGA
ATAGtatttccttttcctttttcttttttcttttttttccttttcttatt
AATCGTACTAggtaattttctttcaagaaaaAGCCAGTTTTATcccaaca
aaaaaacaattttgaaagcaATCAATGGATGAAGGAAAAAGCGCTTGCTA
AGTTAAATTTTTGATCAGCGATTAAAAACTTCCACCAACATTTAGAAAGA
TCAAAAGTTTTCATCAGAGCGGTGATCGCTTTTGAAAGTGAAGAGGGGGT
TCGACCAGGTTCGATATAAAGGGTCGTGTATGTTTAAGCACTTTCAAAAA
GTActtgttccaatttacaatACATTTCCCCAATCATTTCTGTTTTGTTA
GTAGAAGATTCAGTCGGCTCTGAATCTAATTCAAAATATTGCCTTATGAT
TTCAACCTTTTGATTTTCCATAGTGGAAAGCGGAAGTATAAATGCCCCAT
AGACCGATCAACAATTACTGTAAGACTTTACGAGTTTTAACTTCAGTTTA
GATTTCTTTATCAATTTACTGTAAGACTTTACGAGTTTTAACTTCAGTTT
AAATTTCTTTAACAATTATTGTAAGACTTTACGAGTTTTAACTTCAGTTT
AAATTTGTTTAACAATTATTGTAAGACTTCGAATAGATATTAACCTTAGT
TTAACACGAACCTCAGTACATTTTTGTCCAATCCAAAATACTTCGGAACA
TATTTTTGCGTTAATTTAGCTTATTAAAATGGCTATCTATCTACTTAACT
CTAGGTTATAACTAGGATCAATAGACGTGTTTCTACCCGACAAAAAGTTG
ATAGATTATTGCttgaattttctttaaagttatTCCGAGACACTGGAAAG
GAGAGAGAGATATTGAATAGTGTTGTCAGATGTATTCACAATGAGAGTGG
ATGTGAATGGACACAAGAGCTGCGGGAGTTAAAGGTGAGTTTGGTGAGGA
TCCATTTCAACAAGTAAGTTACATTTGAATTTGTCTGcgagctagacgac
taattcagacatagtagagataaagcaaaaagtaatggaggaaTAATTAT
AGTCTATACAGCCAAATATAGTTTATataaactaaatcccgtaacaataa
tcgtattatcatataacgcctatactactgtattacaagcattataaacg
actccgaTCTACATTTGAATAATTATTGTATTTAAAATGCTATCTTATAA
GCTTGTTTAGCCAAGTTTAACTTTTATAGAAACTGCTGGTCCTATAAACT
AACCCGGGTGATCAAAATTGCTGACCCGAAAAATTGTACCCTTTTAGTGT
TCGGAGAAAATTTCTCAAGGTTTGATCAAACTTGAACCAACAAATCAGCC
TCTCACTTAGTTTCTTTTCACCCTTTTAGCTCACTCCCGGAAGCTTTGAT
TggatgttttttcattcaacgtTAGATATTGGTGTCTACAGTTGAACTCG
TGTAGTTTCGAACTAAATAAGTTCAACTGTTCAAATGAGTTCAACTGTAT
TAAgtttttgatttaattcttcGACGATCCTTTCTTGTTTGCAGAATCAT
CTAAATGAATGCCAGTTTGAAGAGATCGAATGTCTTAATGGTTGTGGTGA
AACATTCCAAAGAATGAACCTTGAAAAGCACGATACAGAAGATTGTCTGC
ATAGAATGATGACTTGTTTATTTTGCCACGATGACTATCCTTTTCATCAG
GAGCAGGTAGGTGAGGCTTCCTGATGTAGCTGAAATCTGTACCAAAAATG
GTGAAGTTTCTAGCTCCGAAGGATAaacagttcattttttcttcttcttc
atttttcatcttcattttcaaaaatcttttaagtTATTTTCTAAGAAATA
GAATGGCTCTGAATTAGCTTTTCGACGAGTACTAATGTGTTAAGTATGTG
GCTATTGTTGAAaaaaatggcaagcaaaacaaGAATTAGTTCACATAGTT
AGGATaactttttaatctttttttatggtatgtatgtatgtaatagttta
tttcaagttgacgaacaggtagcaacaaaggctaataaaagtcaacgcta
ctttacaatttgtaaggtgattacagTTCAGGCacaagggcctctaaacc
gttcttgtacaaaaaatctttttgaaatataatttttcacgaGGGCTTCC
TCGTACCCTCCATTTAAAATCGTCATTCGATCTGGCTTTATTCATCTCGT
CTGCTCTCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNATAATGTAGCGTTCGTTGGCATTTATGACATTGAATTCTCATTTTT
TCATCGTCTTTTATACAATTATGCTCGGTACATCGATTGTTGTCACTCGC
ATCTTCGTCAGGGATCATGATCTTGCCAGGTGATGTcgtttttggttgaa
atttggctattttttccatatttttaaaattttattgaaaattcttcatt
ttgaaaaataaacgaaGAGCACAACCTTTctgtttgacgtcaaattttgg
tAGCGGTGGGGCCAAGTCTGGAGTTCCGTGACGACCTAGCCATTGTTAGC
CTATCcgaaagaacagtatattataagatatttttgtttttgtttcgttt
TTATGGCCCAAAATCGGAAATTGCCCCATTTCATATAGCTTAAATGAAGT
ACTTGTCGGTATAAATTTTCAAAGTGAGAATCATTTTTCAGATACCCACA
TAGTACTCTTACTTTTTTACAGGATCACAATAAAAATTGTCAATACTTTC
CGCTTTGTTGTGAGTTTTGCCAGAATGGAAATATTCCGAGATGTCAGGTG
ATTTTGTACTTTACTATAACTTAGCTCTTCTCCACTTCTAAAGTTTTTAC
CCCGCGCTGAATTAATTCCAAATTGAAAGATATTCTTACGGTAAACTTCT
CTGAAGGCATGTTCACAAGATCTTAGTAATTCAACTTTCCACCTCTTTTT
AGATGGAAAATCATATTAATCAAGACTGTGGCAAGGCTCCACGCAAGTGT
GAATTTGCACACTTAGGATGTGatgaaaaggttgatttttttttcatatc
attTTAGGTCAAGTTTTCAGCAACTTTCGTATATTCCAGTAATATTTTTA
TCTCTAACTTCTTTTGTTCCTTTTTCGAATTCTTGTTAATTTACAGTTCT
AAAAATGTTACCACTGCACAATCAGTTTTCGAAGAGAATTCACCGTTATA
TTACAtataataccgagtttatgtataccttatcggccaaaatttagtcg
gccttaattattagtgggccctaattttagtcggccctaattttagtcac
ctcgtcaaaacttagtcactaagggccgactaataattaagaccgactaa
aaatgtgggccatttctaaatttaccaGCACCagcagatggaaaatagga
gaaagcttaaaatactggaaaataaggAGAGCTTAATtagaaacttttaa
tttggcccaaatttttagtcggccttaattttagtcggccctaattttag
tcaccgagccaaaatttagtcacttagggccgactaagttttggccgata
aggtatgtgTTTTTCTGCATCGGAGACGGTAAAATTCTAATTTGactaca
tcctgactgactgaggacgacggtagaTCAGAACTTTTAccatcctcgat
tttgcgggtcaaaactgcgtgTTATTCCAAATCATTTCACTCACTTtacc
tcaaaagtgcaaatgcataaactcgctaattaTACGTCTTTTCAAAACGC
AATCTAGATAAAGCTTCAGGATGTTCAAAACCACAACGAGTTATTTCAAG
AGCACCATATGAAACTAGCCATACAAGAGTTGGTACGTAAAGATGAACGA
TTGGtgactttacaaaaagaaaacaaccgattggttaaaaaaaataacag
actacgaaaagaaaataaaaaccaaaaggATGAAATTAAATGAATGGGGT
TGTCAATTGCAGAATTGTCTGAAAACAGCTCAAACGAGCATAAATGGAAA
ATCTTCAACTTCAGCTATGAAATCTCGAAAGCAATGACTCATTTCAACCA
CTTTTTGAGTAAATCGTTTTACACTGATCTAGGATATCATGTTCAAGTCG
ACCTGTACCCAAATATTAATCATAGTAATGTTGTGGCTATTTATATCAAA
ACTATAAGTGGAGAATACGATGAAACCTTGCGCTGGCCAATTCCTATGAC
TCAATTCTACATTCACCTTTCGAGTTGCGATGGGTGTCCATGCATAGCCA
ATATGCATGTAAACTCTCACGAAAATATGCAGACTCATTTGGCTTTACAA
AGGCCTCCACATTCTAACACAGGAGCTGGTTTCCTCAATCAATTATCCCT
TGCTGATCTACAAAAGGCGTTGATTAATGATACGCTTATTTTGACATTGA
AAGTGCATTCATTGTAATGCTAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052616TCONS_00052616Clytia hemisphaericatranscript
TCONS_00052617TCONS_00052617Clytia hemisphaericatranscript
TCONS_00052618TCONS_00052618Clytia hemisphaericatranscript
TCONS_00052619TCONS_00052619Clytia hemisphaericatranscript
TCONS_00052620TCONS_00052620Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00052618-proteinTCONS_00052618-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_218supercontigscaffold_218:691115..699237 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.53	9.58	3.8	2.62	1.01	1.23	2.19	1.69	1.8	1.52	1.96	1.46	1.04	1.41	2.9	2.17	3.28	4.03	0.71	0.71	1.68	1.71	12.3	9.31	9.64	8.89	1.37	1.41	5.75	8.03