XLOC_033207 (gene) - C. hemisphaerica

Overview


Name	XLOC_033207
Unique Name	XLOC_033207
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_217:127564..140004+

gene from alignment at scaffold_217:127564..140004+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_033207 ID=XLOC_033207|Name=XLOC_033207|organism=Clytia hemisphaerica|type=gene|length=12441bp|location=Sequence derived from alignment at scaffold_217:127564..140004+ (Clytia hemisphaerica)
NNATCGAAAAGTGGATTTACATCCCAATCGCACCAGCTCCAGAACAATGA
CAGTGTTTTTAATGGCTCAGGAAATACCACACTCTTCAATATCGAGAACA
ACCGACACGTAGGTTTTTCTATTAATTACgtaacaaaaagtttgattatA
TGAATTATATAGCTGCCGTAGCGTGAAGGTTGAAGATATGACCATGGTGC
ACAATGTTGTGGGTTCGAACCCTAGTCGGGTCAAACCAAAGATTCTAAAG
TTATAATTGATTTCTCTCTACTTGATGCTCAGTAACTTAAGAGAATTTTC
AAGGACTATTatagaaatccagggaaaggagtggcgacCTCACATatggt
cgcaaacttacttacttatataGAGGAGTCAGACCGGTTGTTGGTTATTG
GTTTGTACGGATTTTTATAGGTCATTGGGCCAAACTTGTTCCTTGAACAG
GCTATGCAAATGAATTAGCCCGAGAAAAAAACAGGAAACTAAACAAGAGC
ACATGAAAATGATTATATTTTCTACCCTAGGCTTTGGAGCTCTGTCAGCA
GATGTCAAACACTTTGATGGGTATACGACACAAGATTTGTAAAGCTATCG
ATAAAGAGAAGAATCGAAGTAACACGTGGCTTGGATATTTCCGTGAAATT
TTTATGATGAACGAAGTCGATGATTTCTCATGCAAGAGAGACGAGAACCG
ATTGATCGATTACTTAGAACACTCGTGCAAAGCTTTCGcaaattttttca
aggtttgTAAATGAAGCTTTTTTTCCCAGATGATATCTTTTTGACCCATA
CATGTTATTTTAAGCGtacaaaaaatcgaaaacaggctcagaaaTGCTTA
GGAAGGCCCGACAAGGCTGGAAAATGCTTGTAAGGATGCTTTTATCCCAA
GCAAAGATTTAGGGTAATTTTAAAAAATCCGTAAAATACCAACCAAGATC
AGGAGAATACATTTTTCGTTAATGCTTAgtatatgcttaaatttttgcca
tatctgagcctagttATACTCGTGAACACTCGACTTTGTAAAATTAGATT
GTTCACAACTCCGACGGGGAGGATTTTTTCCCATTTGACCTTCTGGATCT
GTAATACGGGAAGTATGTTTTAAAGTTGAACATAAGCTTTGTTTGCATAG
AGAAATGTTTTTTGGTGAAAGTCATACAAAATTCAACCAATAAACATCAT
TCGGAAATGAGATTTTTATCGGTTTTTTCACACACGTCTGCTTTTAGTGT
ATCAATAGTTATGTACTTATCGTTTTTGTCAAGGCAAGAAAAAAAGGGCA
AATCTCAACATTAGTATCTTaggaaaatgagaatttttctaTAACATAAA
CTTTTGACAATNGTTTTTTACACACGTCTGCTTTTAGGGTATCAATAGTT
ATGTATTTATCGTTTTTGTCaatgcaagaaaaaaaaaatggcaaatCTCA
AAATAGTATCTTaggaaaatgagaatttttctaTAACATAAACTTTGGAC
AATGAgtgaaatcaagtgcgtattacttataGGAAtaaacggatcctgca
ctaatgtacttcccagttttctcaaaggtaacgaagcgagtgggaattga
acccacgacctctcgcttgccgggcgattgctctcccaactgCGCTATCG
GTTCGTTGCTATTACACTAGTTCGTAGTAGACGAGGGGAGCGACGTGCTC
AATGTTCACCATCCGGTACCTGAATTCTACGAATCAATGGAATTGCCACG
GACTGAGACACAGCTAGTGTCCAATCTCCAACCAACCCGCTAACTTTGAG
AGAACTGTTAGGCTATGTACATTGGGGAGAGGCATTAGCCCAACGGACAA
TGAGATTCGGCTTTTGGTCATGTGGATGAATTTCTTTCATTGTCAAAGGT
TCATCTTATAGAAAGATTCTCAATATGCTAGAGACTCATTTTGAGATTGC
TCCTTCTGCTTTGACAACGATGTTATATATCTTTTCTTTGCTTACTGTAG
CTCCCAGAACTACCGACGAGAGGAGAATCAGAAAGTTTGAGTGATCAGGT
GGAGAACATCAACTCGCTGATCCCAACACCACGTCTCTATGACGACGAGA
GTGTTCCGGAACACAGGGTTACCGAGAACGGCATCGAATTAACGGACAGG
GGAAGATACCAGGTATATTATtcttttttaccctttttcggGGTTGGCAC
TCACTTTTTACCGAAATTCGTTCATATTCCTAGGGttgtttttgaggatt
tttagtAAAGATTGCATTTCGttgaactaattttcgcggtagaaACCTAA
AAACGCTGTGGAAAATAGTGAGAGGTCTAGGGATAGAGAAACGACGCGTG
CGCAATCACGTgacttatacacgttttttagaTTGCGTTCTGTACATAGT
TTTTATATTCATTCTAACATATATTCAGTAGCGGAAAGACGTATAAAGTT
ATATCTAAAATCTTCAATGTTTCTACGTTTTTACTGATACTCATGATCCA
GAACTATTAAGAGTTAAGAAGATTTTACATGGCGCCCGATGAGGGACAGC
AGAGAAGTCAGCATTCGAATCGTTGAACTGTACAAAATGAAGTAAGAGCA
GCACGgtatatacaaatttacgtaTCATCTAACATTTGTGACGAATTTAC
AAatctatttgatttttttcacaccgatatctttcttctttgctatcttt
cctttattttctttttacggatagttttggatgtttttggcggatttttt
ctggattttttcgATACGGTTTAGCAATGTAAGAAAATTGGCAAGAGAGA
GGGTCTGAGGTTAGTTTTGACTACAACGGTAAAGTCAGCACAAGATTATC
TAACAGGAGAAGACATTCAACGGTCAAGGCTAGTTGGTTTCAAGAGAACA
GTTCAAGAAGTTGTAAAACAACTCGAATCAGCAAACGAGGATGTCATCAA
AGGTTTAGAAGCAGATAAGATTGGCGAGGACATAGTTGAGTCTTTCACTT
ATGTTCAGTCAGCCAATGACTTAGAGGCAAGTATTGACATTAAGATGCAA
GAGTTAGTTTTAAAAGACAGCCCTGTTTCAAGCTCAGTCTCATCCATAGC
TTCATCCAGCAACAGACAGACATGCAGGTTGCCAAAGATGGAGCTTCCCA
GTTTCAAGGGAGACCCTCTTCTTTGGCAAGGATTTTGGGACCAGTACAAT
GTTGCAattcatgaaaatgaaagtttaaCAGATATTGACAGGTTCAATTA
CTTGAAGAGATTTTTGAGTGGCGAGGCTTTAAGATCAGTCTCAGGCTTAA
CTTTGAATAGTGAGAATTATCAAGAAGCTATCCAGATATTGAAAGACAGG
TATGGAAACGAACAGATTCTAATTTCGGCACATATGGAAGCGTTGTTAAA
GATGAACAAGGTTAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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GGTTATGGTTTGTCGATGTTGTTGCAAGTGTGGGTAAAGTAACGGTGGAG
AGGTTTGTTTTGGTTCCAGCAGATTTGATTAGAGGATGTGAGTTACATGG
GTTTTGTGATAGTTCGTCGGAAGTTTATTGCGCAGTTGTGTATTTGAGAG
TGCTGATGGGGACTGATGTGAAGACGTCTTTATTNNNNNNNNNNNNNNNN
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NNCGATGACATAATGAAAGAGAGTATCGACTTAACGGAAACTGACAATAA
CGTGACAACGACTTTGACAATGACGAAAATACCTGCTACCAACTTACACG
CCATCATTGAGTACGAACGTTTCGGCTCACTCGAGAAGCTTATAAGTATA
CTAAGCTACGTCAGACGATTTATTGAGAATttgaggaagaagaagaaagg
aaAACCATTATCATTGGACACTCTTTCAACTGAAGAACGAAAAGACACCA
TGGAACTGATTATTGCAAACGAACAACATCAACTGAAGGGACAAGAGGAC
taccaaaaattgaaatcatcGTTAAACTTGTTTGAAGATCAGAAAGGACT
TTTACGGCTACGCGGACGATTCGGAAATTCAACATTACAATACCAAGAAA
AGCATCCACTCATACTCAGAACAGACAGTGTATTTACGGAACAACTTATA
AAGGAGACACACGAGAAAGTATTCCATCACGGCGTGGAATCAACACTGGC
CCATTTACGAACTAATTATTGGATTGTCAGAGGAAGGAAGACAGTCAAAA
ATTTACTATATAAGTGTACCTTATGCAAACGTTATCAAGGAAAGACAATA
TCACCACCAGCTAGTCCTGACTTGCCAGATTTTCGTTTAAGTTTTAATGC
TTTCAATGCCACAGGATTGGACTACGCTGGACCCTTGTATGTATAAAGTG
AAGATAAGAAAGAGACTCAGAAGGTCTACATTCTACTCCTAACATGTGCC
GGAACTCGTGCTATCCATCTAGAGGTCTGTCCAGACATGAAAAATTCTGC
TTTCATTCGtgcttttaaaagattttcgtcACGCCGAGGTGTACCTTGTG
TGGTTATTCACGacaatttcaaaactttcaaatcgaaagaagttaaactt
tttttcagcCAACAGGACATTGAACAACAATTTATTTTACCTTCTTCCCC
CTGGTGGGGTGGAATGTACGAGCGTCTTGTGCGCAGCgtgaaaatatctt
taaagaaaacattaggTAAATCCCTAGTAACACTAGAAGAATTGCAGACG
ATCTTATGTCAGATTGAGGCGTTTATTAACAGCAGACCACTATGTTACGT
AAACGAAGATGACATCGACGAGACTATCACACCAAACCATTTAATTTTTG
GGAAGAATATCTTTCACAAGCAACACGGTAATGCtgaagttttgttttta
gacAATAATGACGACTGTACAAAGAGAATGAGACACATAAAAATCATTCT
GTCACATTTCCAAAAtagatttgaaaaagtttaccTTCAAGAATTGAGGC
AAAATAACATTTATAGAAAGAATACGGATAATGATGTAAAGTTGCGCGTT
GGAGAGGTTATTTTAATTAAAGGAGAAAAGATNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGGAAAGAC
GTATAAAGTTATATCTAAAATCTTCAATGTTTCTACGTTTTTACTGATAC
TCATGATCCAGAACTATTAAGAGTTAAGAAGATTTTACAAACGCGAagta
gttcccgcgaaaattagtttcgtTAAAAGTATTATCTGTGAAAggtaaaa
acttaaaaaacccTAAATTGGGTCAACTTAAAGCTTCCAAAttttatact
ttaatgggatgaactttcgcggggattaaaatccgcgaaattaagtccca
atggaaatttggaagggtcTCATCCTCGAAAaaagtaaaagtcacaaaat
tgtgaaaatattgccacccaatagtgcctaacgcgaaattaagtccccgc
gaattttcgaatttcgcggataggctcaaccgcgaaatttaatccccgcg
aaagtttatcccattaaagtactcaattatttcttattttgtATAGATGA
TACAAGGGATGAGACGATTCGATGTAGTTTACGGCGGTGATCGAGAGTTC
CAACCTTTGAGAAGCTTCGAATCACCACACCTTGTTCGATTATTGTATCG
AATATCCACTCACCTCAATAATAAGGTGATcaattacttttatttttatt
ttcaccaagGTTGCAACTTTTCTGTAGACAGAAATCTGTCCATAAAACTT
CTCATTAGAACTTCCTTTCCGATAACAAGCTTTGAATGTGGAACTTATGT
AAAactgaaatataattttttgcgTATCGTCCATATTCATCAAGGATGTT
TTACTTTCCTTCCTGATACGGTGAGAAAATATCCTCCTTTTTAGCCAACC
TTTCGCCACACTTCTAGAAGTGTGCAACAATTAGTTTTGAATCTCGAGAT
TACAAGTAATTTTAACAACTCTATTCCCAATTATCACCTCAAAAGCTCCC
TATTCATgaatgatatgcaccattgcaatgtcttccacggacccaacagc
tgattggttgtatgtgacatattgactgattttacgtcacttacaaccaa
tcagctgctgggtccgtgatgtaatatcagaagacattgcaatggtgtat
atcatgaattcagCAACTAAAGGCCGGCtcaaatgaatccaacattcaAT
TGGCCTATACTAGACGCCACGGCTTTTTTCTACGCTGTAACGTCTATTCC
aatttgcgactttttcgaatgttttgagcccaggttttcgggctctaaac
attcgattttttgacgtcattttaaacgtttgaagctcctgcagtatcAA
AAAAaccgaatttgcgtcaaaacacttgaaaggcttctatttttcgaaaa
tcgtcaaagtggaactcacagccaattcgattgacttccaaatttgccat
actcaccaactttgccaaatctacaattttaatgtcaaaagatcacagtt
tcatggcaaatttgtacatcgctacgccgccattatgatttccgttttgt
gatgcttagtcagcagttttctgtcggcgtttttaaccaatcaaattacc
gatcggcattgttttgctttagcattggaaggtcttctatttttcaaaat
ctttggcaaaagtggcaaaattggagtgaaaagaacacaggtctcgTGGN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtt
tgctttagcattggaaggtcttctatttttcaaaatctttggcaaaagtg
gcaaaattggagcgaaaagaacacaggtctcgtgggaacagtgttttgta
cGGAGACATAcggaggtaagttccaaaaatgccaagaatgccacattcac
cacatcttttttatttggcatttatggcactcaaattttgccacatttgc
caaatttttgtcaatcgaatgcaaaataattggcaatcagggcaaaaaag
gcatattttgaagtcaatcgaattggctgtaagaaacgggatgaaaaatc
ccggtttttggtgaggtactcGCTAACATTCAATCCAACATTTCAAATTT
ATTGTTGGACGAAATGTTGGACGAGAAGTCCCGTGGgaaaattcgaaaag
ttgcatgaaaagtcatttgctggatgaaaagtttgacggcgatcaaactt
catccaacatgatttccaacaattttcttaaaaagttgcaattttatgac
ttgcgcaaatgaacccaacatttgatccaacaataatgttggatcaaatg
ttggatcaaatgttggattcatttgccCCGGcctctcaatttttttaatt
ataatttttatatcaataaatatgaattattttcactttttcagcaCGGC
GAACGATTGCATGAGCTATACAACCGTCCAGACATTATCGGACGCTCTTT
ACGTAAAATTTCACAGAAAGGGTTAAAACAAGAACATTATGCTGAATCAG
CGATCAAAATGCCTACGACGTCGCGCAGTCAAACAACGACAGCTGCGGCA
GACGTCGACAATCAAGTGAAGCCACGTATCACGTTGCGTTTTATGGGCTC
GTTTTATTTTCTTGGATATCTATGCTGGGCGGTCGTACTTTGTAGACTTT
TTGATTGTAATTGGCTAACAATTATTTTACTGACTCTATTGGTTTTAATG
GTGAGTGTTTTATACCATGTAGACTCGCCTCCGAAATCTAAAAGAAACTA
ACATTACTTCACTTCACCAAAATCGTATGCTTCAGGATTCtttagtttta
ccagaaaaccttAACCAATCAACGGTTTACAGAATCCATTTATCAAAGCT
ATTTGAGGAGGCTTTTATGGAATCAGTGATTGGATTTCGATGTAGAAAGA
AAAAGTACACTACAATAACAAATGAAGAGTTTCCTGAAAAGAACAGCTAA
ATGTGAGAGTGATTCGGAATAAACACATTTTGGAATGTGGTTAACGATAA
AAAGGGCTGCAGAATTATTATTGATCACGTGTTATGTTATGTTTACATGA
TGATGCGAGGAAGTTTTTTCAATCCTTGCAACACTTTGAAGGTCTATAGA
CATTGTGTGATGTcgtttcaattttgtttttattaagaATTGACTTTGTG
ACATTTCAATATCTAGAGGATCTTTTAATTAGAATTATAGAAATTGTTAG
tacaaaacaaaattataaatacaattttagtaaaaataaaatcgaTAGAA
TAATTCTTCtatttacaaataaattataaaagTGTGATGGtttattgttt
tgatgaatGATGCCATTCGAGTTGTAACTTATCTGCAATCCTATTGATCA
TGATAACTCGTAATCATTCCATAAGCTACAGGGAAAAGGAAGATAGTAAA
TGCTTCACAGAGGGCTTAAACTCACTACGTACACTGCATAACTATTTTTT
TACTGCTAAACTACTTCAATAGCGCTTCGTCGGGCAAACGTCatgattat
tacttctctcatttgaccgaaattcaatcccacaatccttttcgtcttaa
ttcaaaagtcgtgaaagttattactttttctttgtaattgagtgtaattt
gcgtgcaatcgtaataaacgcaaagggtgatgggattgaatttcagtcaa
acataaaaatcaatgtctatttttagattcgcgacGGTATG

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00052517	TCONS_00052517	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00052517-protein	TCONS_00052517-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_217	supercontig	scaffold_217:127564..140004 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
22.62	20.27	21.52	22.43	7	4.59	9.98	9.22	7.67	8.27	5.9	6.78	8.33	9.5	9.2	10.82	11.28	11.18	4.91	4.94	7.56	8.16	22.13	18.02	14.97	15.6	4.74	3.89	14.96	16.43

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XLOC_033207 (gene) - C. hemisphaerica