XLOC_033207 (gene) - C. hemisphaerica

Overview
NameXLOC_033207
Unique NameXLOC_033207
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_217:127564..140004+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033207 ID=XLOC_033207|Name=XLOC_033207|organism=Clytia hemisphaerica|type=gene|length=12441bp|location=Sequence derived from alignment at scaffold_217:127564..140004+ (Clytia hemisphaerica)
NNATCGAAAAGTGGATTTACATCCCAATCGCACCAGCTCCAGAACAATGA CAGTGTTTTTAATGGCTCAGGAAATACCACACTCTTCAATATCGAGAACA ACCGACACGTAGGTTTTTCTATTAATTACgtaacaaaaagtttgattatA TGAATTATATAGCTGCCGTAGCGTGAAGGTTGAAGATATGACCATGGTGC ACAATGTTGTGGGTTCGAACCCTAGTCGGGTCAAACCAAAGATTCTAAAG TTATAATTGATTTCTCTCTACTTGATGCTCAGTAACTTAAGAGAATTTTC AAGGACTATTatagaaatccagggaaaggagtggcgacCTCACATatggt cgcaaacttacttacttatataGAGGAGTCAGACCGGTTGTTGGTTATTG GTTTGTACGGATTTTTATAGGTCATTGGGCCAAACTTGTTCCTTGAACAG GCTATGCAAATGAATTAGCCCGAGAAAAAAACAGGAAACTAAACAAGAGC ACATGAAAATGATTATATTTTCTACCCTAGGCTTTGGAGCTCTGTCAGCA GATGTCAAACACTTTGATGGGTATACGACACAAGATTTGTAAAGCTATCG ATAAAGAGAAGAATCGAAGTAACACGTGGCTTGGATATTTCCGTGAAATT TTTATGATGAACGAAGTCGATGATTTCTCATGCAAGAGAGACGAGAACCG ATTGATCGATTACTTAGAACACTCGTGCAAAGCTTTCGcaaattttttca aggtttgTAAATGAAGCTTTTTTTCCCAGATGATATCTTTTTGACCCATA CATGTTATTTTAAGCGtacaaaaaatcgaaaacaggctcagaaaTGCTTA GGAAGGCCCGACAAGGCTGGAAAATGCTTGTAAGGATGCTTTTATCCCAA GCAAAGATTTAGGGTAATTTTAAAAAATCCGTAAAATACCAACCAAGATC AGGAGAATACATTTTTCGTTAATGCTTAgtatatgcttaaatttttgcca tatctgagcctagttATACTCGTGAACACTCGACTTTGTAAAATTAGATT GTTCACAACTCCGACGGGGAGGATTTTTTCCCATTTGACCTTCTGGATCT GTAATACGGGAAGTATGTTTTAAAGTTGAACATAAGCTTTGTTTGCATAG AGAAATGTTTTTTGGTGAAAGTCATACAAAATTCAACCAATAAACATCAT TCGGAAATGAGATTTTTATCGGTTTTTTCACACACGTCTGCTTTTAGTGT ATCAATAGTTATGTACTTATCGTTTTTGTCAAGGCAAGAAAAAAAGGGCA AATCTCAACATTAGTATCTTaggaaaatgagaatttttctaTAACATAAA CTTTTGACAATNGTTTTTTACACACGTCTGCTTTTAGGGTATCAATAGTT ATGTATTTATCGTTTTTGTCaatgcaagaaaaaaaaaatggcaaatCTCA AAATAGTATCTTaggaaaatgagaatttttctaTAACATAAACTTTGGAC AATGAgtgaaatcaagtgcgtattacttataGGAAtaaacggatcctgca ctaatgtacttcccagttttctcaaaggtaacgaagcgagtgggaattga acccacgacctctcgcttgccgggcgattgctctcccaactgCGCTATCG GTTCGTTGCTATTACACTAGTTCGTAGTAGACGAGGGGAGCGACGTGCTC AATGTTCACCATCCGGTACCTGAATTCTACGAATCAATGGAATTGCCACG GACTGAGACACAGCTAGTGTCCAATCTCCAACCAACCCGCTAACTTTGAG AGAACTGTTAGGCTATGTACATTGGGGAGAGGCATTAGCCCAACGGACAA TGAGATTCGGCTTTTGGTCATGTGGATGAATTTCTTTCATTGTCAAAGGT TCATCTTATAGAAAGATTCTCAATATGCTAGAGACTCATTTTGAGATTGC TCCTTCTGCTTTGACAACGATGTTATATATCTTTTCTTTGCTTACTGTAG CTCCCAGAACTACCGACGAGAGGAGAATCAGAAAGTTTGAGTGATCAGGT GGAGAACATCAACTCGCTGATCCCAACACCACGTCTCTATGACGACGAGA GTGTTCCGGAACACAGGGTTACCGAGAACGGCATCGAATTAACGGACAGG GGAAGATACCAGGTATATTATtcttttttaccctttttcggGGTTGGCAC TCACTTTTTACCGAAATTCGTTCATATTCCTAGGGttgtttttgaggatt tttagtAAAGATTGCATTTCGttgaactaattttcgcggtagaaACCTAA AAACGCTGTGGAAAATAGTGAGAGGTCTAGGGATAGAGAAACGACGCGTG CGCAATCACGTgacttatacacgttttttagaTTGCGTTCTGTACATAGT TTTTATATTCATTCTAACATATATTCAGTAGCGGAAAGACGTATAAAGTT ATATCTAAAATCTTCAATGTTTCTACGTTTTTACTGATACTCATGATCCA GAACTATTAAGAGTTAAGAAGATTTTACATGGCGCCCGATGAGGGACAGC AGAGAAGTCAGCATTCGAATCGTTGAACTGTACAAAATGAAGTAAGAGCA GCACGgtatatacaaatttacgtaTCATCTAACATTTGTGACGAATTTAC AAatctatttgatttttttcacaccgatatctttcttctttgctatcttt cctttattttctttttacggatagttttggatgtttttggcggatttttt ctggattttttcgATACGGTTTAGCAATGTAAGAAAATTGGCAAGAGAGA GGGTCTGAGGTTAGTTTTGACTACAACGGTAAAGTCAGCACAAGATTATC TAACAGGAGAAGACATTCAACGGTCAAGGCTAGTTGGTTTCAAGAGAACA GTTCAAGAAGTTGTAAAACAACTCGAATCAGCAAACGAGGATGTCATCAA AGGTTTAGAAGCAGATAAGATTGGCGAGGACATAGTTGAGTCTTTCACTT ATGTTCAGTCAGCCAATGACTTAGAGGCAAGTATTGACATTAAGATGCAA GAGTTAGTTTTAAAAGACAGCCCTGTTTCAAGCTCAGTCTCATCCATAGC TTCATCCAGCAACAGACAGACATGCAGGTTGCCAAAGATGGAGCTTCCCA GTTTCAAGGGAGACCCTCTTCTTTGGCAAGGATTTTGGGACCAGTACAAT GTTGCAattcatgaaaatgaaagtttaaCAGATATTGACAGGTTCAATTA CTTGAAGAGATTTTTGAGTGGCGAGGCTTTAAGATCAGTCTCAGGCTTAA CTTTGAATAGTGAGAATTATCAAGAAGCTATCCAGATATTGAAAGACAGG TATGGAAACGAACAGATTCTAATTTCGGCACATATGGAAGCGTTGTTAAA GATGAACAAGGTTAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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aaAACCATTATCATTGGACACTCTTTCAACTGAAGAACGAAAAGACACCA TGGAACTGATTATTGCAAACGAACAACATCAACTGAAGGGACAAGAGGAC taccaaaaattgaaatcatcGTTAAACTTGTTTGAAGATCAGAAAGGACT TTTACGGCTACGCGGACGATTCGGAAATTCAACATTACAATACCAAGAAA AGCATCCACTCATACTCAGAACAGACAGTGTATTTACGGAACAACTTATA AAGGAGACACACGAGAAAGTATTCCATCACGGCGTGGAATCAACACTGGC CCATTTACGAACTAATTATTGGATTGTCAGAGGAAGGAAGACAGTCAAAA ATTTACTATATAAGTGTACCTTATGCAAACGTTATCAAGGAAAGACAATA TCACCACCAGCTAGTCCTGACTTGCCAGATTTTCGTTTAAGTTTTAATGC TTTCAATGCCACAGGATTGGACTACGCTGGACCCTTGTATGTATAAAGTG AAGATAAGAAAGAGACTCAGAAGGTCTACATTCTACTCCTAACATGTGCC GGAACTCGTGCTATCCATCTAGAGGTCTGTCCAGACATGAAAAATTCTGC TTTCATTCGtgcttttaaaagattttcgtcACGCCGAGGTGTACCTTGTG TGGTTATTCACGacaatttcaaaactttcaaatcgaaagaagttaaactt tttttcagcCAACAGGACATTGAACAACAATTTATTTTACCTTCTTCCCC CTGGTGGGGTGGAATGTACGAGCGTCTTGTGCGCAGCgtgaaaatatctt taaagaaaacattaggTAAATCCCTAGTAACACTAGAAGAATTGCAGACG ATCTTATGTCAGATTGAGGCGTTTATTAACAGCAGACCACTATGTTACGT AAACGAAGATGACATCGACGAGACTATCACACCAAACCATTTAATTTTTG GGAAGAATATCTTTCACAAGCAACACGGTAATGCtgaagttttgttttta gacAATAATGACGACTGTACAAAGAGAATGAGACACATAAAAATCATTCT GTCACATTTCCAAAAtagatttgaaaaagtttaccTTCAAGAATTGAGGC AAAATAACATTTATAGAAAGAATACGGATAATGATGTAAAGTTGCGCGTT GGAGAGGTTATTTTAATTAAAGGAGAAAAGATNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGGAAAGAC GTATAAAGTTATATCTAAAATCTTCAATGTTTCTACGTTTTTACTGATAC TCATGATCCAGAACTATTAAGAGTTAAGAAGATTTTACAAACGCGAagta gttcccgcgaaaattagtttcgtTAAAAGTATTATCTGTGAAAggtaaaa acttaaaaaacccTAAATTGGGTCAACTTAAAGCTTCCAAAttttatact ttaatgggatgaactttcgcggggattaaaatccgcgaaattaagtccca atggaaatttggaagggtcTCATCCTCGAAAaaagtaaaagtcacaaaat tgtgaaaatattgccacccaatagtgcctaacgcgaaattaagtccccgc gaattttcgaatttcgcggataggctcaaccgcgaaatttaatccccgcg aaagtttatcccattaaagtactcaattatttcttattttgtATAGATGA TACAAGGGATGAGACGATTCGATGTAGTTTACGGCGGTGATCGAGAGTTC CAACCTTTGAGAAGCTTCGAATCACCACACCTTGTTCGATTATTGTATCG AATATCCACTCACCTCAATAATAAGGTGATcaattacttttatttttatt ttcaccaagGTTGCAACTTTTCTGTAGACAGAAATCTGTCCATAAAACTT CTCATTAGAACTTCCTTTCCGATAACAAGCTTTGAATGTGGAACTTATGT AAAactgaaatataattttttgcgTATCGTCCATATTCATCAAGGATGTT TTACTTTCCTTCCTGATACGGTGAGAAAATATCCTCCTTTTTAGCCAACC TTTCGCCACACTTCTAGAAGTGTGCAACAATTAGTTTTGAATCTCGAGAT TACAAGTAATTTTAACAACTCTATTCCCAATTATCACCTCAAAAGCTCCC TATTCATgaatgatatgcaccattgcaatgtcttccacggacccaacagc tgattggttgtatgtgacatattgactgattttacgtcacttacaaccaa tcagctgctgggtccgtgatgtaatatcagaagacattgcaatggtgtat atcatgaattcagCAACTAAAGGCCGGCtcaaatgaatccaacattcaAT TGGCCTATACTAGACGCCACGGCTTTTTTCTACGCTGTAACGTCTATTCC aatttgcgactttttcgaatgttttgagcccaggttttcgggctctaaac attcgattttttgacgtcattttaaacgtttgaagctcctgcagtatcAA AAAAaccgaatttgcgtcaaaacacttgaaaggcttctatttttcgaaaa tcgtcaaagtggaactcacagccaattcgattgacttccaaatttgccat actcaccaactttgccaaatctacaattttaatgtcaaaagatcacagtt tcatggcaaatttgtacatcgctacgccgccattatgatttccgttttgt gatgcttagtcagcagttttctgtcggcgtttttaaccaatcaaattacc gatcggcattgttttgctttagcattggaaggtcttctatttttcaaaat ctttggcaaaagtggcaaaattggagtgaaaagaacacaggtctcgTGGN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtt tgctttagcattggaaggtcttctatttttcaaaatctttggcaaaagtg gcaaaattggagcgaaaagaacacaggtctcgtgggaacagtgttttgta cGGAGACATAcggaggtaagttccaaaaatgccaagaatgccacattcac cacatcttttttatttggcatttatggcactcaaattttgccacatttgc caaatttttgtcaatcgaatgcaaaataattggcaatcagggcaaaaaag gcatattttgaagtcaatcgaattggctgtaagaaacgggatgaaaaatc ccggtttttggtgaggtactcGCTAACATTCAATCCAACATTTCAAATTT ATTGTTGGACGAAATGTTGGACGAGAAGTCCCGTGGgaaaattcgaaaag ttgcatgaaaagtcatttgctggatgaaaagtttgacggcgatcaaactt catccaacatgatttccaacaattttcttaaaaagttgcaattttatgac ttgcgcaaatgaacccaacatttgatccaacaataatgttggatcaaatg ttggatcaaatgttggattcatttgccCCGGcctctcaatttttttaatt ataatttttatatcaataaatatgaattattttcactttttcagcaCGGC GAACGATTGCATGAGCTATACAACCGTCCAGACATTATCGGACGCTCTTT ACGTAAAATTTCACAGAAAGGGTTAAAACAAGAACATTATGCTGAATCAG CGATCAAAATGCCTACGACGTCGCGCAGTCAAACAACGACAGCTGCGGCA GACGTCGACAATCAAGTGAAGCCACGTATCACGTTGCGTTTTATGGGCTC GTTTTATTTTCTTGGATATCTATGCTGGGCGGTCGTACTTTGTAGACTTT TTGATTGTAATTGGCTAACAATTATTTTACTGACTCTATTGGTTTTAATG GTGAGTGTTTTATACCATGTAGACTCGCCTCCGAAATCTAAAAGAAACTA ACATTACTTCACTTCACCAAAATCGTATGCTTCAGGATTCtttagtttta ccagaaaaccttAACCAATCAACGGTTTACAGAATCCATTTATCAAAGCT ATTTGAGGAGGCTTTTATGGAATCAGTGATTGGATTTCGATGTAGAAAGA AAAAGTACACTACAATAACAAATGAAGAGTTTCCTGAAAAGAACAGCTAA ATGTGAGAGTGATTCGGAATAAACACATTTTGGAATGTGGTTAACGATAA AAAGGGCTGCAGAATTATTATTGATCACGTGTTATGTTATGTTTACATGA TGATGCGAGGAAGTTTTTTCAATCCTTGCAACACTTTGAAGGTCTATAGA CATTGTGTGATGTcgtttcaattttgtttttattaagaATTGACTTTGTG ACATTTCAATATCTAGAGGATCTTTTAATTAGAATTATAGAAATTGTTAG tacaaaacaaaattataaatacaattttagtaaaaataaaatcgaTAGAA TAATTCTTCtatttacaaataaattataaaagTGTGATGGtttattgttt tgatgaatGATGCCATTCGAGTTGTAACTTATCTGCAATCCTATTGATCA TGATAACTCGTAATCATTCCATAAGCTACAGGGAAAAGGAAGATAGTAAA TGCTTCACAGAGGGCTTAAACTCACTACGTACACTGCATAACTATTTTTT TACTGCTAAACTACTTCAATAGCGCTTCGTCGGGCAAACGTCatgattat tacttctctcatttgaccgaaattcaatcccacaatccttttcgtcttaa ttcaaaagtcgtgaaagttattactttttctttgtaattgagtgtaattt gcgtgcaatcgtaataaacgcaaagggtgatgggattgaatttcagtcaa acataaaaatcaatgtctatttttagattcgcgacGGTATG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052517TCONS_00052517Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00052517-proteinTCONS_00052517-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_217supercontigscaffold_217:127564..140004 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
22.62 20.27 21.52 22.43 7 4.59 9.98 9.22 7.67 8.27 5.9 6.78 8.33 9.5 9.2 10.82 11.28 11.18 4.91 4.94 7.56 8.16 22.13 18.02 14.97 15.6 4.74 3.89 14.96 16.43