XLOC_033024 (gene) - C. hemisphaerica

Overview
NameXLOC_033024
Unique NameXLOC_033024
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_211:117450..125951+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033024 ID=XLOC_033024|Name=XLOC_033024|organism=Clytia hemisphaerica|type=gene|length=8502bp|location=Sequence derived from alignment at scaffold_211:117450..125951+ (Clytia hemisphaerica)
GGTCCTGATTTTAGCTACATATTGCCTAACACCtaatattcttcaaaaag aaCGGCGCGCGGGAAGATCACCGTGGCGATTTCTATAAATTGTTCGAAAC GTGACCAGTTTGCTCTGAAGTAGCAATAGCTTTAGTCTAGTTTTCTGAAA ACATGGCGCACAAGCAGTGCGAAACGAAAAGATGGCTGAACTGTTGCTGG TCGAAGAAACTCTTCAAAGTAACATGCTTTTCATGGAAGGAGACGAAGAG ATAATTGGAGAAGAGGAGATTTTATCAACAGGACCTTTAATTGCTCTTCA GCCATCAAGTGTAGATCATTTGATTGACCCAAATATAGAGGTAATCGAAG AAGTTATTGACCAATCTTATGTTGATGATGTTCCGGTTATTGCACAAGAA CAAGAGATTTCAACAGATGTACAGCCTCAGCAACAACCAAACAATAAGAA AAGAAAGCTTAAAGGTAGTAAACCAAATTTCTTAAAGAAGTCTAAGGGAG CTGATGGCGAAGAAGGAACAAGTGAAATTGATGTTCCCAGAAAGTGGGAG CGGAAGAAAATTCAAATCAAGACACTAGAAGGAGAATTTTCTGTTACAGT TTGGGCATCAGGTataatgttgtttttattgcaGTAATTCAACAAATAGT CTTGTTCTAAAACTCTAAATAGAAGTGCATCTAGCAGTATAGCCCTAACT CTTCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgtcacagcgaaaggtttg tttttattttagtttgtatctttgaaagaccccatcggctttaggctggg ctgtcggctttaggacctctcacggtactgTATGATTTTTAGGACCTTCC CCTGGCACTCTGGTCTGGTCCCCCGGAGCAAAAAGTGCTGTTTTTTCCTT GCTCTGGAACACCAGATGATTCTGGAGCACTTCAACAAACCACAATTTTT GGCGACTGGTCGGCACCAGAACTCCAGAACACCGGAACTCCGGAacggtt ggcagacgatatcatactccaggatgcaagtgaaatttttcaatccgcgg acctagacgggggtttggttattatcagttagggttagggttggagctcg agagtcacaatataaggccgaaggccttcttaggggcattcgtaCCCTGT GACTTACCTTAGGATCCCGTagagggatccttgtaggggcaccggtaggg ttgggagctttcttaattaaggtctgtaaattacacgctataagtatttg tgaatgacggCTTTCTGGTCTGTCTCGTTGGCGTaagcggttaggcattg ggtAGTGCCATTGAAATTCCAAAACTTTGAAAGTTTCTCTTTGTCTTTTT AAGACATCCTTGATGACATTCTCACAcagtttcaaagtttttttcatgtt ttgatgaAACCCAGATGGGgtgctgaaagtttgaatttcttAAGAGAGGG GTTGCCAGTTAGAGGGGGGGGGTCACTTCCTACTTCATAAAATTATgtac aaattcaaaattgtttcttttcaacaaaaatatcaCGCATCTCTATAAAA TTGCCTTTAGAGTGATGGGTCGAAACCATTGCATAAAGGGGGTCGAACTG AAACTTCTATATAATTTCCTATGGGGaggaatcaaaatttcaaatgtatT TCCTAAGGGTTCATACGGGTTCTCCCTTCCTAATAGAGTGGGGGGTTATA TCAATGTATGACAAGGTTTCCACCAAAACTAACCAAAGgcaaatagaatt tctattgcACTAATTTCCTAATTTTGCACTGATTTTTTGCCTGACCACTT TTCTGTCCACCCTGTATGGCTCATGTCATATGTCTAAAAGATGTAGAAGT TATTTCTTATATCTATGTGCCTTTGAATATTTGTTTTTCACGATGTCTGC TAGTAGTAGTAGTATCTTACAAAACTTATCTGAGAGCCATGTCAACTGAG Tatccaaaaaccttgaaaagtgccaaaatgtttaccaaaaaaccttgaaa aaacactttaaaatgaccaaaaaaccttgaaaactttgaaaatcctgaaa aaaaaaccgTAGACACCCTGTCAAAATAGACAAAGATCGTTTATGACCCC TGTCTCAGATGAGGCTTTCAGGCTTTATCTAAAGATAGAGAACTAAAACA AGCTTGACCCACTAAACTATATATTTAGCACCAGACTCTCTGACAATCTG AGAAATTATTTGCCCGGGAAGAGCAGCAGATTTCAGCGAAATGCTGCTTT TTGCTCTGAAAGTGTATGGTGGAAATGGTCTGAAATGGTGcttgttttca aacttaaacatcaattcatttgaaatattttctttatttggattattgaa aggttaaaggtttgttttatttttattttttgatgatagCTTCACTCAAT CACTTACAATgagcttttgaaatttgtttattttgtattctGCTTGCTCT CGCATGATGCCGCCTTTATGGAGTTTTTTTTGGCGTCTGCTAAATGCGAT TTCGTGCACTTTCGCTCACTGTGCACacacgtattttttttaaatcagcc GACTCATGGTAGTTTCAATATTTCGACCAGTGATGCTTTCGAATATAgca aaaatacaaagttaaaaaaaaaaatggtagagtaatTTGGGAGCTGaact gcgtagttcatttgtttttaaattttgctgctttaatTGGTCTGTCATTT GATGGcttgcaagtttccctccactgatgcaagttatagAACTTCATATA GAACTTAGCTACAGCAGATGATTTTGAttgaagttgttggaatgtttaca aaggctctTGACAGGCTTTTTTATACTGTCAATCTGGCTTTTTTTAAGCC ATTACCTTTGGGTACTTTGCCAACCTCCCCTACTGAAAGcctatttattt ttgaaaaaagtttccttGGGATAACAGTTTAATGGTAAATTCTATTTatt cttataatttttataGAAGACAAAACTGAGGAACAAGATAACCCAGAAGA AACGATAGAAGAAATTCAATCGTCCATCATTGTTGAAGAACAAAAGGAAC CCGAACACGTGGAACAAATAGAACAACATCAAGACCAGAAAcaagttgaa aagaaaaaagagaaaccAGCGAGCAAAGTTAGAAAAACAAGCGAAAGTAG AAATAAATCTTCTGATGGACCAAAgtaagtttcttcttttttactcTATA ACTTGGTTAGCAAAATCTTCAGAATTGTGTGGAATATTTCTTTCAAAGTA ACAGGAAGAGAATTTGGATCACTTCGAAAAAAATTACCTATGTTAGAGAC CTTTTCAAATTTGGTAAATTGTCTTCTTTTTAAAAGTCAATAATATCTTG CAAAATTTATTTGTATATGTCTGATGATTGGATCGTTGTAAGGCATGAAA CTTGaagttattttattttatttttaacttCGAAATCTTGAACTAAATTC ATCTTGAGAAGTTGGTTAATAGTGATAAGGTTTGCTCTAAATTCTGTTTT CAAAGGCTtctgaaaaatattccaaaagaaGGGAAGATTTCTTGCCAACA TACCTTAAACAATGTGCTGTGTTCTTTTGCCTATTGAAAATTATTGGCAA TTATTTAGCGTTTGATTTTTAGTAAAGGGCAAAATGATggatttacagat ttttcagGTTATTTCAAGAACAACTTCTGGCAGCTCTCACaaactttcac tacttttttatttaatattatttttattaaatacatctaatttgattgaa ttaagctaaaaagtctttatcttttttatttcaggaaaagcAAAAAGTCA TCTAAACCTAAGGATGCAGCAGCCCCAGCTAAAAACATTACCTGTCAACA TCCAGTAAGttgttattgttttcatttttatcaacaGAGTACCAAATTTT AAGCTATTCATAATTCACTCTATGCTCAACTAGCGCTTAGCTGCCGAAAT TGACAGCGATATTGAGTTGCAAGAAAATGTACATTTAATTCATGATCTTA CTGCCTAGATCGGCAGACGACTagaaatcctaaaaaaaaatacaaaacaa gtCTCATACCATAAAACTCTGCTCGTGGAGCTATGGTGAATAAGATGGAA ATGTAAACACCTACATCATATTTTGATAGAAGTCTTTttatttgttattc ttgatttcAGGGGTGTGGAAAAGTGTTTCGAGATAATTCGGCAATGAGAA AACATCTTCATACACATGGGCCAAGAGTTCATGTTTGCGCAGAATGTGGA AAGGTAAAAATAATCTCCttttatatcaattttggcCGGGTTGGTCAGTT GGTAGGACATTCCCTGTACAATCCAAGTGTTGTGGGTTTGATCCCCGGTT ACCGCCAACTCATtgaatgagtagcttagattgggtaatttGATCTAGGC GATAAGTTAcagggagctgagagtaggtgtgtcGCGCCACCTCAGCATTT GACCTCCCGGCCCCAAACCTCCCTCCTTTACTTTACTTATTCCAATCGTT TCAAACTTTACTGAAAGTTTTCCAAATACAATTATTTCAGAATTTACAAT TTTAGTGTTCATCTCATTCGggatcttttgttttaaattttgcaaCTCGA CTGTCAAATTATCAGAATTTTTCCTTGAATATTTGAATATCTGTAATATC TACAATACAATATGTGTAACTTTTTTTACCAGGCCTTTGTAGAGAGCTCC AAATTGAAACGTCACCAGTTGGTACACACAGGAGAAAAGCCTTTCCAGGT AATAATATTTATTTTTTAGTTAACTTAACCTCTACTTTACTTATCTATTC TACCTCTAAGCTCGAAATTGTGGATTTCCTCGTTTTGAGTGCTAAAACAT AGGGATGTGTAACACCAGCACACTTAGCAGAATAAACAATTGCTTTTCCA TAACTTTTTCATTTTGTGTAATTTGAACGAACAACAAAAATATTTAAATG AGAGCCTAATGAATGAAAACCTTAGTACAAACAAAAATGTTTCGTTTTCT GCTTTCAGGCTGGAAAGAAACTTTCAGATATTTAGATGGGTAGATGGGGT TTAGATTCAGTTTGTCAGTTGTTTTGGAGATTCAAAATATCCGAAAACAA CAAATGCTCAAAAACTCATAGAAGGCATATTTCATAGGGCAAAACTTTAA CCGCTCTTTATAAGACTGTTATTTAAATTGTTGAATTTTTATAATTTCTT TTAGTGTACTTTCGAAGGCTGTGGTAAACGATTCAGTTTAGATTTCAATC TACGTACTCATGTTCGAATACATACTGGCGACAAACCGTACGTTTGTCCT TTTGATTCATGCAACAAACGATTTGCACAATCTACAAACTTAAAATCACA CATATTGACTCATGCTAAATCCAATACAAATTCCAAAGGTGCTAACAATG CTAGTAAACATCAACCGTCTATCGAGGAGAGCATACCTTTAGAATCTCAA TTCTCTTCTTCAATCACCAATGAAGATGAAGATGAAGATGAAGATCTTGG TGATGAAGATCTGGTGATTCAAGAAGAATGAGAGAATGATATGATGCTTT TGAAATAATTCTGCATTCATAATAGAATATTGGCACAAGGAAATGGAGAA AGTTTTAGAGGAGTGTTTTTATATGCTTTTAGAATAGATTCTGCATTCAT AATAGAATATTGACCAAGAAAATGGAGAAAGTTTTGTGTATTTGTCGAAT TTGAATGGAGGAAATTTTCAAATAGTATTTTGTGAAGATGCATTGATCGA ATTTGACCAGGTATGATTGAAAAGAATGAAATACCATTTTTATTTGGAGA AGATTTCAAGATATGGTCAATCTTGAATTTCGCTTTAACCAATTATTGAT TTGGTATTGCTTGGTTATCGAACGTAGTGACAACAAAAGTTCAATTTCTA CTACAATATGGTAACACTGGTATCGCATTTGATTTGACAATAGAAAGATA CAAAATGATTGGTTACCCGTTATAGATATCTAATGGAAATGTAAACATCG ATGGAAAATCCTGAAGCCTGGTATCCCTCCATGTTCTTAATATTTTGTAG AACAAGAGGATTTCTTTGAAGAAAGCAGAACTGTAATTGAAACACATGTT TTAAAATCTTGGTCAAAGTTAAATCGTGGTTGCTTCATTTTGAGATCTAT TTTTACTTTGTCCCATTATTAATTTAATTAATTTTTTCATTATATTTTTT TGCGTTTTTTTTCCCAAGAATTAAAACTATATGAAATTATTATCATCTTT GCATATTATTTCAGTCATTATTTTACGCTTTCAAATTTCGTCTTATTTGA TGTACATATTTATTAATTTATTTTGCAAATTTATTTTTGTCTTTGCAACA TCGAGCTTTTCCGTCCCCTCCCTGTTGAAGATATCTACTTTTTTAATTCA ACAGCCCCTGGATGTCTTGCTTAAAAATAAAGTGCCCCCCCCCCCTGGAT ATCCTGGATGTCCAAGTAGATAGAAGGCATGAGGATATCCAGTCATTTTG GCCTGTACTTTATATACTGGATGTCTGATATCCTCAAGATGTGTTTTTTT ACCAAAACTATATTTCAAACGTCCATCTTCGTTTAGCGAATGGATACCAA AAGAacgttgttttaatgttttaatgaaGTCAAAAATTACAATGATTGTA CGTCAATATTTGAGTTTTTCTCAActgaaaaatgatgattttgaccACAT CTGCTAacggacaagctggagtttttacaagctcttatttgatttggttg gtcgttaacctgtaataaaacaattttattactttttctaaagaacgcgt catctctgttacttttaatgaccaattattgaagtattttataaaaactc cagaacaTCCCTCTGCTAAGTgtgattttattttcaggttCTCAATTTTC CT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052154TCONS_00052154Clytia hemisphaericatranscript
TCONS_00052155TCONS_00052155Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00052154-proteinTCONS_00052154-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_211supercontigscaffold_211:117450..125951 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
27.46 27.42 30.77 27.54 46.31 33.48 30.72 31.52 22.94 22.08 23.26 20.39 13.73 15.97 11.64 13.94 19.29 19.22 7.98 10.52 16.81 17.35 28.7 23.57 18.93 23.3 13.04 11.7 17.66 18.24