TCONS_00052155 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052155
Unique NameTCONS_00052155
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2740

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052155 ID=TCONS_00052155|Name=TCONS_00052155|organism=Clytia hemisphaerica|type=transcript|length=2740bp
GGTCCTGATTTTAGCTACATATTGCCTAACACCtaatattcttcaaaaag
aaCGGCGCGCGGGAAGATCACCGTGGCGATTTCTATAAATTGTTCGAAAC
GTGACCAGTTTGCTCTGAAGTAGCAATAGCTTTAGTCTAGTTTTCTGAAA
ACATGGCGCACAAGCAGTGCGAAACGAAAAGATGGCTGAACTGTTGCTGG
TCGAAGAAACTCTTCAAAGTAACATGCTTTTCATGGAAGGAGACGAAGAG
ATAATTGGAGAAGAGGAGATTTTATCAACAGGACCTTTAATTGCTCTTCA
GCCATCAAGTGTAGATCATTTGATTGACCCAAATATAGAGGTAATCGAAG
AAGTTATTGACCAATCTTATGTTGATGATGTTCCGGTTATTGCACAAGAA
CAAGAGATTTCAACAGATGTACAGCCTCAGCAACAACCAAACAATAAGAA
AAGAAAGCTTAAAGGTAGTAAACCAAATTTCTTAAAGAAGTCTAAGGGAG
CTGATGGCGAAGAAGGAACAAGTGAAATTGATGTTCCCAGAAAGTGGGAG
CGGAAGAAAATTCAAATCAAGACACTAGAAGGAGAATTTTCTGTTACAGT
TTGGGCATCAGAAGACAAAACTGAGGAACAAGATAACCCAGAAGAAACGA
TAGAAGAAATTCAATCGTCCATCATTGTTGAAGAACAAAAGGAACCCGAA
CACGTGGAACAAATAGAACAACATCAAGACCAGAAAcaagttgaaaagaa
aaaagagaaaccAGCGAGCAAAGTTAGAAAAACAAGCGAAAGTAGAAATA
AATCTTCTGATGGACCAAAcAAAAAGTCATCTAAACCTAAGGATGCAGCA
GCCCCAGCTAAAAACATTACCTGTCAACATCCAGGGTGTGGAAAAGTGTT
TCGAGATAATTCGGCAATGAGAAAACATCTTCATACACATGGGCCAAGAG
TTCATGTTTGCGCAGAATGTGGAAAGGCCTTTGTAGAGAGCTCCAAATTG
AAACGTCACCAGTTGGTACACACAGGAGAAAAGCCTTTCCAGTGTACTTT
CGAAGGCTGTGGTAAACGATTCAGTTTAGATTTCAATCTACGTACTCATG
TTCGAATACATACTGGCGACAAACCGTACGTTTGTCCTTTTGATTCATGC
AACAAACGATTTGCACAATCTACAAACTTAAAATCACACATATTGACTCA
TGCTAAATCCAATACAAATTCCAAAGGTGCTAACAATGCTAGTAAACATC
AACCGTCTATCGAGGAGAGCATACCTTTAGAATCTCAATTCTCTTCTTCA
ATCACCAATGAAGATGAAGATGAAGATGAAGATCTTGGTGATGAAGATCT
GGTGATTCAAGAAGAATGAGAGAATGATATGATGCTTTTGAAATAATTCT
GCATTCATAATAGAATATTGGCACAAGGAAATGGAGAAAGTTTTAGAGGA
GTGTTTTTATATGCTTTTAGAATAGATTCTGCATTCATAATAGAATATTG
ACCAAGAAAATGGAGAAAGTTTTGTGTATTTGTCGAATTTGAATGGAGGA
AATTTTCAAATAGTATTTTGTGAAGATGCATTGATCGAATTTGACCAGGT
ATGATTGAAAAGAATGAAATACCATTTTTATTTGGAGAAGATTTCAAGAT
ATGGTCAATCTTGAATTTCGCTTTAACCAATTATTGATTTGGTATTGCTT
GGTTATCGAACGTAGTGACAACAAAAGTTCAATTTCTACTACAATATGGT
AACACTGGTATCGCATTTGATTTGACAATAGAAAGATACAAAATGATTGG
TTACCCGTTATAGATATCTAATGGAAATGTAAACATCGATGGAAAATCCT
GAAGCCTGGTATCCCTCCATGTTCTTAATATTTTGTAGAACAAGAGGATT
TCTTTGAAGAAAGCAGAACTGTAATTGAAACACATGTTTTAAAATCTTGG
TCAAAGTTAAATCGTGGTTGCTTCATTTTGAGATCTATTTTTACTTTGTC
CCATTATTAATTTAATTAATTTTTTCATTATATTTTTTTGCGTTTTTTTT
CCCAAGAATTAAAACTATATGAAATTATTATCATCTTTGCATATTATTTC
AGTCATTATTTTACGCTTTCAAATTTCGTCTTATTTGATGTACATATTTA
TTAATTTATTTTGCAAATTTATTTTTGTCTTTGCAACATCGAGCTTTTCC
GTCCCCTCCCTGTTGAAGATATCTACTTTTTTAATTCAACAGCCCCTGGA
TGTCTTGCTTAAAAATAAAGTGCCCCCCCCCCCTGGATATCCTGGATGTC
CAAGTAGATAGAAGGCATGAGGATATCCAGTCATTTTGGCCTGTACTTTA
TATACTGGATGTCTGATATCCTCAAGATGTGTTTTTTTACCAAAACTATA
TTTCAAACGTCCATCTTCGTTTAGCGAATGGATACCAAAAGAacgttgtt
ttaatgttttaatgaaGTCAAAAATTACAATGATTGTACGTCAATATTTG
AGTTTTTCTCAActgaaaaatgatgattttgaccACATCTGCTAacggac
aagctggagtttttacaagctcttatttgatttggttggtcgttaacctg
taataaaacaattttattactttttctaaagaacgcgtcatctctgttac
ttttaatgaccaattattgaagtattttataaaaactccagaacaTCCCT
CTGCTAAGTgtgattttattttcaggttCTCAATTTTCCT
Run BLAST on NCBI

transcript from alignment at scaffold_211:117450..125951+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052155 ID=TCONS_00052155|Name=TCONS_00052155|organism=Clytia hemisphaerica|type=transcript|length=8502bp|location=Sequence derived from alignment at scaffold_211:117450..125951+ (Clytia hemisphaerica)
GGTCCTGATTTTAGCTACATATTGCCTAACACCtaatattcttcaaaaag
aaCGGCGCGCGGGAAGATCACCGTGGCGATTTCTATAAATTGTTCGAAAC
GTGACCAGTTTGCTCTGAAGTAGCAATAGCTTTAGTCTAGTTTTCTGAAA
ACATGGCGCACAAGCAGTGCGAAACGAAAAGATGGCTGAACTGTTGCTGG
TCGAAGAAACTCTTCAAAGTAACATGCTTTTCATGGAAGGAGACGAAGAG
ATAATTGGAGAAGAGGAGATTTTATCAACAGGACCTTTAATTGCTCTTCA
GCCATCAAGTGTAGATCATTTGATTGACCCAAATATAGAGGTAATCGAAG
AAGTTATTGACCAATCTTATGTTGATGATGTTCCGGTTATTGCACAAGAA
CAAGAGATTTCAACAGATGTACAGCCTCAGCAACAACCAAACAATAAGAA
AAGAAAGCTTAAAGGTAGTAAACCAAATTTCTTAAAGAAGTCTAAGGGAG
CTGATGGCGAAGAAGGAACAAGTGAAATTGATGTTCCCAGAAAGTGGGAG
CGGAAGAAAATTCAAATCAAGACACTAGAAGGAGAATTTTCTGTTACAGT
TTGGGCATCAGGTataatgttgtttttattgcaGTAATTCAACAAATAGT
CTTGTTCTAAAACTCTAAATAGAAGTGCATCTAGCAGTATAGCCCTAACT
CTTCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgtcacagcgaaaggtttg
tttttattttagtttgtatctttgaaagaccccatcggctttaggctggg
ctgtcggctttaggacctctcacggtactgTATGATTTTTAGGACCTTCC
CCTGGCACTCTGGTCTGGTCCCCCGGAGCAAAAAGTGCTGTTTTTTCCTT
GCTCTGGAACACCAGATGATTCTGGAGCACTTCAACAAACCACAATTTTT
GGCGACTGGTCGGCACCAGAACTCCAGAACACCGGAACTCCGGAacggtt
ggcagacgatatcatactccaggatgcaagtgaaatttttcaatccgcgg
acctagacgggggtttggttattatcagttagggttagggttggagctcg
agagtcacaatataaggccgaaggccttcttaggggcattcgtaCCCTGT
GACTTACCTTAGGATCCCGTagagggatccttgtaggggcaccggtaggg
ttgggagctttcttaattaaggtctgtaaattacacgctataagtatttg
tgaatgacggCTTTCTGGTCTGTCTCGTTGGCGTaagcggttaggcattg
ggtAGTGCCATTGAAATTCCAAAACTTTGAAAGTTTCTCTTTGTCTTTTT
AAGACATCCTTGATGACATTCTCACAcagtttcaaagtttttttcatgtt
ttgatgaAACCCAGATGGGgtgctgaaagtttgaatttcttAAGAGAGGG
GTTGCCAGTTAGAGGGGGGGGGTCACTTCCTACTTCATAAAATTATgtac
aaattcaaaattgtttcttttcaacaaaaatatcaCGCATCTCTATAAAA
TTGCCTTTAGAGTGATGGGTCGAAACCATTGCATAAAGGGGGTCGAACTG
AAACTTCTATATAATTTCCTATGGGGaggaatcaaaatttcaaatgtatT
TCCTAAGGGTTCATACGGGTTCTCCCTTCCTAATAGAGTGGGGGGTTATA
TCAATGTATGACAAGGTTTCCACCAAAACTAACCAAAGgcaaatagaatt
tctattgcACTAATTTCCTAATTTTGCACTGATTTTTTGCCTGACCACTT
TTCTGTCCACCCTGTATGGCTCATGTCATATGTCTAAAAGATGTAGAAGT
TATTTCTTATATCTATGTGCCTTTGAATATTTGTTTTTCACGATGTCTGC
TAGTAGTAGTAGTATCTTACAAAACTTATCTGAGAGCCATGTCAACTGAG
Tatccaaaaaccttgaaaagtgccaaaatgtttaccaaaaaaccttgaaa
aaacactttaaaatgaccaaaaaaccttgaaaactttgaaaatcctgaaa
aaaaaaccgTAGACACCCTGTCAAAATAGACAAAGATCGTTTATGACCCC
TGTCTCAGATGAGGCTTTCAGGCTTTATCTAAAGATAGAGAACTAAAACA
AGCTTGACCCACTAAACTATATATTTAGCACCAGACTCTCTGACAATCTG
AGAAATTATTTGCCCGGGAAGAGCAGCAGATTTCAGCGAAATGCTGCTTT
TTGCTCTGAAAGTGTATGGTGGAAATGGTCTGAAATGGTGcttgttttca
aacttaaacatcaattcatttgaaatattttctttatttggattattgaa
aggttaaaggtttgttttatttttattttttgatgatagCTTCACTCAAT
CACTTACAATgagcttttgaaatttgtttattttgtattctGCTTGCTCT
CGCATGATGCCGCCTTTATGGAGTTTTTTTTGGCGTCTGCTAAATGCGAT
TTCGTGCACTTTCGCTCACTGTGCACacacgtattttttttaaatcagcc
GACTCATGGTAGTTTCAATATTTCGACCAGTGATGCTTTCGAATATAgca
aaaatacaaagttaaaaaaaaaaatggtagagtaatTTGGGAGCTGaact
gcgtagttcatttgtttttaaattttgctgctttaatTGGTCTGTCATTT
GATGGcttgcaagtttccctccactgatgcaagttatagAACTTCATATA
GAACTTAGCTACAGCAGATGATTTTGAttgaagttgttggaatgtttaca
aaggctctTGACAGGCTTTTTTATACTGTCAATCTGGCTTTTTTTAAGCC
ATTACCTTTGGGTACTTTGCCAACCTCCCCTACTGAAAGcctatttattt
ttgaaaaaagtttccttGGGATAACAGTTTAATGGTAAATTCTATTTatt
cttataatttttataGAAGACAAAACTGAGGAACAAGATAACCCAGAAGA
AACGATAGAAGAAATTCAATCGTCCATCATTGTTGAAGAACAAAAGGAAC
CCGAACACGTGGAACAAATAGAACAACATCAAGACCAGAAAcaagttgaa
aagaaaaaagagaaaccAGCGAGCAAAGTTAGAAAAACAAGCGAAAGTAG
AAATAAATCTTCTGATGGACCAAAgtaagtttcttcttttttactcTATA
ACTTGGTTAGCAAAATCTTCAGAATTGTGTGGAATATTTCTTTCAAAGTA
ACAGGAAGAGAATTTGGATCACTTCGAAAAAAATTACCTATGTTAGAGAC
CTTTTCAAATTTGGTAAATTGTCTTCTTTTTAAAAGTCAATAATATCTTG
CAAAATTTATTTGTATATGTCTGATGATTGGATCGTTGTAAGGCATGAAA
CTTGaagttattttattttatttttaacttCGAAATCTTGAACTAAATTC
ATCTTGAGAAGTTGGTTAATAGTGATAAGGTTTGCTCTAAATTCTGTTTT
CAAAGGCTtctgaaaaatattccaaaagaaGGGAAGATTTCTTGCCAACA
TACCTTAAACAATGTGCTGTGTTCTTTTGCCTATTGAAAATTATTGGCAA
TTATTTAGCGTTTGATTTTTAGTAAAGGGCAAAATGATggatttacagat
ttttcagGTTATTTCAAGAACAACTTCTGGCAGCTCTCACaaactttcac
tacttttttatttaatattatttttattaaatacatctaatttgattgaa
ttaagctaaaaagtctttatcttttttatttcaggaaaagcAAAAAGTCA
TCTAAACCTAAGGATGCAGCAGCCCCAGCTAAAAACATTACCTGTCAACA
TCCAGTAAGttgttattgttttcatttttatcaacaGAGTACCAAATTTT
AAGCTATTCATAATTCACTCTATGCTCAACTAGCGCTTAGCTGCCGAAAT
TGACAGCGATATTGAGTTGCAAGAAAATGTACATTTAATTCATGATCTTA
CTGCCTAGATCGGCAGACGACTagaaatcctaaaaaaaaatacaaaacaa
gtCTCATACCATAAAACTCTGCTCGTGGAGCTATGGTGAATAAGATGGAA
ATGTAAACACCTACATCATATTTTGATAGAAGTCTTTttatttgttattc
ttgatttcAGGGGTGTGGAAAAGTGTTTCGAGATAATTCGGCAATGAGAA
AACATCTTCATACACATGGGCCAAGAGTTCATGTTTGCGCAGAATGTGGA
AAGGTAAAAATAATCTCCttttatatcaattttggcCGGGTTGGTCAGTT
GGTAGGACATTCCCTGTACAATCCAAGTGTTGTGGGTTTGATCCCCGGTT
ACCGCCAACTCATtgaatgagtagcttagattgggtaatttGATCTAGGC
GATAAGTTAcagggagctgagagtaggtgtgtcGCGCCACCTCAGCATTT
GACCTCCCGGCCCCAAACCTCCCTCCTTTACTTTACTTATTCCAATCGTT
TCAAACTTTACTGAAAGTTTTCCAAATACAATTATTTCAGAATTTACAAT
TTTAGTGTTCATCTCATTCGggatcttttgttttaaattttgcaaCTCGA
CTGTCAAATTATCAGAATTTTTCCTTGAATATTTGAATATCTGTAATATC
TACAATACAATATGTGTAACTTTTTTTACCAGGCCTTTGTAGAGAGCTCC
AAATTGAAACGTCACCAGTTGGTACACACAGGAGAAAAGCCTTTCCAGGT
AATAATATTTATTTTTTAGTTAACTTAACCTCTACTTTACTTATCTATTC
TACCTCTAAGCTCGAAATTGTGGATTTCCTCGTTTTGAGTGCTAAAACAT
AGGGATGTGTAACACCAGCACACTTAGCAGAATAAACAATTGCTTTTCCA
TAACTTTTTCATTTTGTGTAATTTGAACGAACAACAAAAATATTTAAATG
AGAGCCTAATGAATGAAAACCTTAGTACAAACAAAAATGTTTCGTTTTCT
GCTTTCAGGCTGGAAAGAAACTTTCAGATATTTAGATGGGTAGATGGGGT
TTAGATTCAGTTTGTCAGTTGTTTTGGAGATTCAAAATATCCGAAAACAA
CAAATGCTCAAAAACTCATAGAAGGCATATTTCATAGGGCAAAACTTTAA
CCGCTCTTTATAAGACTGTTATTTAAATTGTTGAATTTTTATAATTTCTT
TTAGTGTACTTTCGAAGGCTGTGGTAAACGATTCAGTTTAGATTTCAATC
TACGTACTCATGTTCGAATACATACTGGCGACAAACCGTACGTTTGTCCT
TTTGATTCATGCAACAAACGATTTGCACAATCTACAAACTTAAAATCACA
CATATTGACTCATGCTAAATCCAATACAAATTCCAAAGGTGCTAACAATG
CTAGTAAACATCAACCGTCTATCGAGGAGAGCATACCTTTAGAATCTCAA
TTCTCTTCTTCAATCACCAATGAAGATGAAGATGAAGATGAAGATCTTGG
TGATGAAGATCTGGTGATTCAAGAAGAATGAGAGAATGATATGATGCTTT
TGAAATAATTCTGCATTCATAATAGAATATTGGCACAAGGAAATGGAGAA
AGTTTTAGAGGAGTGTTTTTATATGCTTTTAGAATAGATTCTGCATTCAT
AATAGAATATTGACCAAGAAAATGGAGAAAGTTTTGTGTATTTGTCGAAT
TTGAATGGAGGAAATTTTCAAATAGTATTTTGTGAAGATGCATTGATCGA
ATTTGACCAGGTATGATTGAAAAGAATGAAATACCATTTTTATTTGGAGA
AGATTTCAAGATATGGTCAATCTTGAATTTCGCTTTAACCAATTATTGAT
TTGGTATTGCTTGGTTATCGAACGTAGTGACAACAAAAGTTCAATTTCTA
CTACAATATGGTAACACTGGTATCGCATTTGATTTGACAATAGAAAGATA
CAAAATGATTGGTTACCCGTTATAGATATCTAATGGAAATGTAAACATCG
ATGGAAAATCCTGAAGCCTGGTATCCCTCCATGTTCTTAATATTTTGTAG
AACAAGAGGATTTCTTTGAAGAAAGCAGAACTGTAATTGAAACACATGTT
TTAAAATCTTGGTCAAAGTTAAATCGTGGTTGCTTCATTTTGAGATCTAT
TTTTACTTTGTCCCATTATTAATTTAATTAATTTTTTCATTATATTTTTT
TGCGTTTTTTTTCCCAAGAATTAAAACTATATGAAATTATTATCATCTTT
GCATATTATTTCAGTCATTATTTTACGCTTTCAAATTTCGTCTTATTTGA
TGTACATATTTATTAATTTATTTTGCAAATTTATTTTTGTCTTTGCAACA
TCGAGCTTTTCCGTCCCCTCCCTGTTGAAGATATCTACTTTTTTAATTCA
ACAGCCCCTGGATGTCTTGCTTAAAAATAAAGTGCCCCCCCCCCCTGGAT
ATCCTGGATGTCCAAGTAGATAGAAGGCATGAGGATATCCAGTCATTTTG
GCCTGTACTTTATATACTGGATGTCTGATATCCTCAAGATGTGTTTTTTT
ACCAAAACTATATTTCAAACGTCCATCTTCGTTTAGCGAATGGATACCAA
AAGAacgttgttttaatgttttaatgaaGTCAAAAATTACAATGATTGTA
CGTCAATATTTGAGTTTTTCTCAActgaaaaatgatgattttgaccACAT
CTGCTAacggacaagctggagtttttacaagctcttatttgatttggttg
gtcgttaacctgtaataaaacaattttattactttttctaaagaacgcgt
catctctgttacttttaatgaccaattattgaagtattttataaaaactc
cagaacaTCCCTCTGCTAAGTgtgattttattttcaggttCTCAATTTTC
CT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033024XLOC_033024Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052155-exon-scaffold_211-1491911889:117450..118060TCONS_00052155-exon-scaffold_211-1491911889:117450..118060Clytia hemisphaericaexon
TCONS_00052155-exon-scaffold_211-1510915933:117450..118060TCONS_00052155-exon-scaffold_211-1510915933:117450..118060Clytia hemisphaericaexon
TCONS_00052155-exon-scaffold_211-1575043694:117450..118060TCONS_00052155-exon-scaffold_211-1575043694:117450..118060Clytia hemisphaericaexon
TCONS_00052155-exon-scaffold_211-1491911889:122016..122223TCONS_00052155-exon-scaffold_211-1491911889:122016..122223Clytia hemisphaericaexon
TCONS_00052155-exon-scaffold_211-1510915933:122016..122223TCONS_00052155-exon-scaffold_211-1510915933:122016..122223Clytia hemisphaericaexon
TCONS_00052155-exon-scaffold_211-1575043694:122016..122223TCONS_00052155-exon-scaffold_211-1575043694:122016..122223Clytia hemisphaericaexon
TCONS_00052155-exon-scaffold_211-1491911889:122840..122903TCONS_00052155-exon-scaffold_211-1491911889:122840..122903Clytia hemisphaericaexon
TCONS_00052155-exon-scaffold_211-1510915933:122840..122903TCONS_00052155-exon-scaffold_211-1510915933:122840..122903Clytia hemisphaericaexon
TCONS_00052155-exon-scaffold_211-1575043694:122840..122903TCONS_00052155-exon-scaffold_211-1575043694:122840..122903Clytia hemisphaericaexon
TCONS_00052155-exon-scaffold_211-1491911889:123210..123302TCONS_00052155-exon-scaffold_211-1491911889:123210..123302Clytia hemisphaericaexon
TCONS_00052155-exon-scaffold_211-1510915933:123210..123302TCONS_00052155-exon-scaffold_211-1510915933:123210..123302Clytia hemisphaericaexon
TCONS_00052155-exon-scaffold_211-1575043694:123210..123302TCONS_00052155-exon-scaffold_211-1575043694:123210..123302Clytia hemisphaericaexon
TCONS_00052155-exon-scaffold_211-1491911889:123732..123797TCONS_00052155-exon-scaffold_211-1491911889:123732..123797Clytia hemisphaericaexon
TCONS_00052155-exon-scaffold_211-1510915933:123732..123797TCONS_00052155-exon-scaffold_211-1510915933:123732..123797Clytia hemisphaericaexon
TCONS_00052155-exon-scaffold_211-1575043694:123732..123797TCONS_00052155-exon-scaffold_211-1575043694:123732..123797Clytia hemisphaericaexon
TCONS_00052155-exon-scaffold_211-1491911889:124254..125951TCONS_00052155-exon-scaffold_211-1491911889:124254..125951Clytia hemisphaericaexon
TCONS_00052155-exon-scaffold_211-1510915933:124254..125951TCONS_00052155-exon-scaffold_211-1510915933:124254..125951Clytia hemisphaericaexon
TCONS_00052155-exon-scaffold_211-1575043694:124254..125951TCONS_00052155-exon-scaffold_211-1575043694:124254..125951Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_211supercontigscaffold_211:117450..125951 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.20365	0.000375069	1.30389	0.0389734	0.197561	0.711338	0.00427918	0.102514	0.000204714	5.13943	4.40283	0.390041	3.09786	0.0217319	1.11556	0.948256	0	0.507434	2.84746e-08	0.839486	3.05673e-06	0.291739	4.2848	0.00231105	18.1078	22.2814	1.9659	2.14816	1.36745e-06	1.45992
Blast
[Close]
BLAST of TCONS_00052155 vs. Swiss-Prot (Human)
Match: TYY1 (Transcriptional repressor protein YY1 OS=Homo sapiens GN=YY1 PE=1 SV=2)

HSP 1 Score: 259.996 bits (663), Expect = 5.206e-77
Identity = 136/231 (58.87%), Postives = 162/231 (70.13%), Query Frame = 2 
Query:  539 RKWERKKIQIKTLEGEFSVTVWASEDKTEEQDNPXXXXXXXXXXXXXXXXXXPEHVEQIXXXXX----XXXXXXXXXXPASKVRKTSESRNKSSDGPNXXXXXXXXXXXXXXNITCQHPGCGKVFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDKPYVCPFDSCNKRFAQSTNLKSHILTHAKSNTN 1219
            +KWE+K++QIKTLEGEFSVT+W+S D+ ++ D+     E +    I+ E   P++ E +   +        ++    K  ++  +    + K  D P                I C H GC K+FRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGD+PYVCPFD CNK+FAQSTNLKSHILTHAK+  N
Sbjct:  203 KKWEQKQVQIKTLEGEFSVTMWSS-DEKKDIDH-----ETVVEEQIIGENSPPDYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARMKPRKIKEDDAPR--------------TIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 413
The following BLAST results are available for this feature:
BLAST of TCONS_00052155 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TYY15.206e-7758.87Transcriptional repressor protein YY1 OS=Homo sapi... [more]
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