XLOC_032988 (gene) - C. hemisphaerica

Overview
NameXLOC_032988
Unique NameXLOC_032988
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_21:107590..111950-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032988 ID=XLOC_032988|Name=XLOC_032988|organism=Clytia hemisphaerica|type=gene|length=4361bp|location=Sequence derived from alignment at scaffold_21:107590..111950- (Clytia hemisphaerica)
TTCATCCGCGATAGTGAAACATCAAAAAATACCATAGAAAGAACTTAAAG ATTGAATAAGATTTGAAGCGAGAAATATTGAAATCAAAATGAGGGTTTTG TGTGTAATTTTGATATTGGAATCTTATATCATTGGAGTAGTTCTTGCAAA TACCGGGGCTAGATTCACCGATACAAAAAATAACAAAAAGATTGCCGCCG GTGAAGACGATAAATATGTCAGTTTGAAAGGTTTAACGGAAGTGCAATGT GTTGGTCATTGCACATTAACTGATGATTGCCATTCTGTGAATCACCATAG TGATGACCAGATCTGTCTGGTGATTGATGAACCATTGGAAGGTGATTCTC ATTTGATTGATGCTCATGGATGGAAATATTTCAAGAAGACAAGAATAACA AAAGAGGTATAGCTGATACTTTTTATGCTATAGTCAAATACAAATTACCA ACTAAAACTAAAACCAAAGCCAACTGTTTTTTTTTGCCGAAAATAGTTTA CAGCCGGTAGAGTTTACCAGTCTTCTTCGGGACTCTACTGTTGATTTTTT CAGTATACCGCTATTACGGCTGTGAACTCTGCGCATATAATATTCTCCCG ACTTTACTATCCCTGTAAACATCGTCTACTATTATTTTAATATCATGGGA CTTTGGAAACTATTCTCCTTCTTGAAATTGAATGAAGGGGAAATGATTTT GGGAGGTTTGAAATATTAAAGTCCCCAGCGCTTACTTCCCTTTCTCTTAT CAAAGAGACCCGGAGTGCTGGGTATGTGCGGACGGAGAGTTGCAAAAATT AGAAAATTTTTAGTTTTAAAGAAAGAATTGTGAAAAATCCCACCTATGGA TAGGACGTTTTTCAAAAATAGAAGAGAATTTTCTAAGGGTCATTTTTTCA CTAGGATTTGGTCTCTCCTAAGCCTTTTCCTTAGTTATAGGAGGTCAAAG AGACGAATATGACCAAATCATCGATTCTCAATGCTCTTAAAGTCTTAAAT GAAATCTTTTTTTGATTCAGGATGAAATCTCAACAAAGAATAACTTTGAA ATAACAAATGGTAAGTCTACTGAATAAACTATGAGCATCTTAAATCTGTG TTACTATCCTCCTTTCTTAAGCTTTTGAAGCAATATTTCTTAGGTTACGT GTATACCAAAATTGTAATTCCGTTTCAAACATTTTTGACTACATTGAGAA TCTCCTATCCCGAGAGTCGCACTTCTACTTATCACACTTGTTCGGCAGAT AGTTGGTCAATGTGCATTATTCACTTGACTGTAAGTAACATTAGAGCTCG ACTTAAGTTTACGCTAAGATAATTAAATTTTCTTCATTAGCGTTCAAACC AAACCCAAACAAGATCGTCAACTTTCTACCTTACCTAAAAGAAGAATGGG AATTAACTTTCAATATCATAATCTATGGAAAATCAGATCAAAACAAAAGT GGAATTTTCACAATGGCAAAAGAATTAACTGCTCAAAATAAATTGTTAAA CATTTATGTTATCACTTCCACCGATCAAAAGATTCGAGTTTACACAAAAG AGATGTCTTATTCTTTCAAGTTTGAATACAACAAATGGCATACTATCAAA TTTACCCAACGTTCAAGTCCGATAAATGATCCGCTACAAACCCACGTAAG ATCTCTGGTCGTTGATGGTATGTACGTCAACAAAATGCTTATCAAACTAC CAGAAGTCTCGGAGAACTTGATTTGTTTTGCTGGTTCACCTCATCACCTT GCGTTGAACGGTCGCGTCCGAAATTTGACGTTTAAACAAGATGGCCTTCC GCATCGTAAGATTCTTTGTTTTTATTGGATGTTGAGAAATTTAGAATTGA ACCAAAACCCCCTATAATACAACTTTTCGACCGTAGCCACCAATTGCCGC GCGGGCATTTTTTGTCCGCTTTATCTCACTAAAACCGTCCCAGTCCTTTT TTCGCACCTATAGACGATAGAAAAATGTGTCAAAAAAGGATTGGATCGAT TTTAGGGGGTAATTAAATAATTTAGTGGCACGCGTCTGACCGCGCGACTA CGGTCGAAAAGGTGTATCAATCAAGTATTTTACTTAGATTTTAAGAAGTT AATTTATATATAAATACTTAATAAATGACTAAATGACTTTTTTAATAGAG AGCACGTTTTTGATTCCTGCGAGTTTGGTCTATGTAATCTTAAGTAGAAG TGTAGCCGCATAACTTGTAATCACTCAAAATTGTTCGTTATAAGAAAACT TTGATTGCATGGTCAGGTGTATGTATAAAGGCTCTTTATTATTTTTTTAA TTTATGTGTTGGTAAGTTTCACAAACTTTAGTGGCTTCAGAAAGATTTTA GCTTCCAAGATTTTAAGCCTAAAGGACATTCTTTCACAACAATCCCTGTA AAAATAATAATTTCTTTATTTTATTGTTTCTAGGAAACATTCGACCAAAG CATAACTACATCTCAAACAACATCGATCCTTGGTACAGAGNTCACAAACT TTAGAGGCTTCAGAAAGATTTTAGCTTCCAAGATTTTAAGCCTAAAGGAC ATTCTTTCACAACAATCCCTGTAAAAATAATAATTTCTTTATTTTATTGT TTCTAGGAAACATTCGACCAAAGCATAACTACATCTCAAACAACATCGAT CCTTGGTACAGAGAATGGTACGTGAGGTTCACTCTGGTGATACACTCAAT AGATTTCACCGATTCTAGCAGTTATCAACGGAAAGGTTACCATAATGTCA TTCATTTCACAACTGGAGTAAACGACGGGTCAATGGGCACAAGAATCGTT TCAGCATTTATCAAAGATACCGGGACAACCATTTTAGGTGCAGAATATAT GGCTAATGGGCAATGGAAACAAATATTCGTAAGTTACACGTTTGATCTTG ATCGCGAATATCGTATTGAATTTAAAAGTTTTGAATCTCAAAATAACCCT GCAGCAAACATTATTCAGTTTTGGGTTGATGGATTAATGAACCCAAACAC TGTTACTAATTTCCAACCTATAATTCAAGGGACAGTGATAATATACGTCA GCGATCCTTGGTATAAACCTGCTGATGCGACACTTTTTGGTCTTGAATAT GGACCATTGGAATAATAAAAAACTTGAGTCCAATTGTTTTATCGCGCACT CTTTTTTTTGCTACTATGTGGAAAACATGCCCGAGGGGGGCACTGGCCTT GACGACCGACGGAAACGTGATTTGACCCTGTCAAATATCTCTTGAGTCTG AAAAAAGGGACCTTGATCAGCGGCACATCCCCTTAATTTTGCCTAAGTAA CTCCTCCCCTGGGATACCATGTCAGTGCAAATAGAATAATTCCCTTCTTG GTAGCTTCCACATTGTAGCAAAAAAATTGTACATTTAAAGCGATTCAGAA CAGGAACTTTATAAACGATGAGCAACCTCTATATCAAAATATAGCAAGAG GGATATGTGCAGCCTACAAGCGAATGGACTCTGATGATAAATAAAATTAT AAGGCTTCGGACAAAAACCTCCACTAAACTTAAAGTTAAAGAATTGATTG AACTTTGATTTCAAAAAAGAATTCTTCTAAAACCAAGAGATGTAAGCGAT GTAAACGAGTGGAAATGGAAAGAGTGCTACCAACATCATAATTTTTCTTT AATCCACCGACAACACCGGCTTCCTATATTCGTTAATTTTCATCGCACGG TATTTTAAACACGGGAAACCCGTCACCTTTTTTATTCCAACACCGAAACA CGGACAAAATGGGTCAATACCAAAACTCCGCCCTAACCTTGCGCCACACG GAGAGGCTATTATTGTTATTGTGAAATATTGCTCAAAGGAATTAATATCA TATGGTGAGAACGAATGGAAAGTTATTTCAACAACGAAATAGGTACCATG AACACACAATATCCCCAGGTTGAAGATGAAAACATGTTAGATTATTTAAT TTCATATTTTTATTTATTTGTTACTTTTGTTGCGAGTTGAATGAAATTGG CGTTTGTCTTCACAGCTTGATATGTATTATTCATACGCTGTGACACTACG AAATGAGGTGTAATGACACAGGGCACTTTTCAATTATTTAAAATATGTAA AATGCACTATAAATTCAATTTTCAACACTCGCTTCAGTGGGCATTCCATC TTTCTACAATTGCTGCAAGTGCCTCAAACGAGGGATGGTTTTTCCAAATC GTGGGTTGCATCTGCGGGACGTAGAGACGTAAAAATACTTTACTGTGTAA AAGTTAGAGTGGGAGCATTATTAGAGCTTTATAATAAAAAAATTAAAAAA ATTAAAAATTCTTCGGTGAATCGATGTAAAACTCTAGTTTTCAAAGATTC AAGACTCAGGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052085TCONS_00052085Clytia hemisphaericatranscript
TCONS_00052084TCONS_00052084Clytia hemisphaericatranscript
TCONS_00052083TCONS_00052083Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00052083-proteinTCONS_00052083-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_21supercontigscaffold_21:107590..111950 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.04 0 0.12 0.09 0.41 0.32 0.16 0.13 0 0 0 0 0.59 1.43 0 0 4.84 2.91 1.76 4 2.52 5.35 0.42 0.45 0.05 0.09