XLOC_032559 (gene) - C. hemisphaerica

Overview
NameXLOC_032559
Unique NameXLOC_032559
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_201:311642..315084+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032559 ID=XLOC_032559|Name=XLOC_032559|organism=Clytia hemisphaerica|type=gene|length=3443bp|location=Sequence derived from alignment at scaffold_201:311642..315084+ (Clytia hemisphaerica)
ataggtcatctaaaaatccataagtgaatccctgagaatgggtgctattg
gtcgcggattcgggatttgtgatttttaaaaatctagacatgccctaact
cacccgagagatattttctttttaatcgatagaTCAAAAATGGTTTTGGT
GATATGAATTATGAGGTCGTGCAAACCTTATTTGGTGCAACAAACAAGAA
GGAGCTGGAAGAACAAATAATCCAGAAAACAATAGATTCTAGTAAGAAAT
TTTCATCGTTCAACAAAAATCCATGTAAACTCGAAACTCGACTCTCctag
aaagaaaataaacttttcaaaTGTTCTCAGCATGTATTTATATGCTATAT
CAAAAATactatacaccgttggaaaggtaTTTTCAAGGAGAATAATCAAA
TAGATTaaagacttttgaaaatttggaaaatgaagatgaaaaagaaaatg
tagTTTTTCTTCTGCTTCAAAAATAGTGACACCAGACGTTTTGGAATATT
TGAACCTTGCTGTTGTGTTCTCTTTCAGATAAAGAGTTGCATTACGTTGT
GAATTAGGTCATTTTTAGCCGTTTTAGGTCTACTTCAAAAAATGACTAAC
TTTTTATGCAACAAAGATAGGAAAAGCAAGGTTCAAATATTTCAAGAGTC
tgatgaaatgatttttttaattttgatttcactgcatttgattgtttttt
acctgAGGACAAAAGGGTTTCTATcccattgagatttcgatagaaatttt
catcctcaCTGCAAGAAGAAGTTCTACCGGGGCtatgagacagggatgtc
taTTGTGTTATGAGATATTTTGACTGCTTTTGAAGACTACAGAATTTTCA
TGGATGGACTTTTCTTGTTGAACCCGGTAAATAACGACTAGTGAGTGTAG
ATACGATGATAGATAAACAACTGTACAAGTTTGTTACAGACTTCATGTAG
ACGACAATTAATAagacatttttttacatatttttctgTTCATGCAAGCC
ACCAAAACAACAAACGTCTAAACTTTGGTAAAACTTGCAAGAACCTCATA
ACTGATTAAACTGACCAACTGACACCTTTGTAAACGTAATTACAAATAAT
GACAAATATTTTGCTCATAGTATAGAACGACCAATATTGACATATAACGA
TGACAGATAAACAACTGCTCAGGTTTGTTACAGACTTCATGTAGACGACA
ATTAATGCGACATCTTTTATTTCTCTATGATTTAACATCACTTAGTTATG
GCTTAAATTGAACTTCCGACATATTTGCTAAAATATATGATAAAATATAG
AGTATGGTGAATTATAAACCTAGAAAatgcaaaagaaaaaattctttttt
caggtATTTTTGAGCTTGTTGGTGTATTTTTAGCCTTCGGAATATCTGTT
TCCATTAGTACAGAAGCCGGTCTCTTTGTGTTCGGAGATACGGAGGGAAA
GATTCATCTCTTGTTTAATGACCAAACAACAGAATACTGTTGTTTGTTGA
AAGGCGTATCATTTGATAAAGCCTGCCGCCAACACAACCACTATTGTAAT
GCGGTATTGACGGCAACACAAACATTCCAGTGCCAAAGTAGTTTGCTGGA
GTACCACATATTCTGTGCCGCGGACGATCGTGATTGTGGGTGTTCATCAG
AATCTCAAGTAATACAAATGTAAGTGATTGATAGACCTTTTCATAAATTA
CGTCACGAACATCACTTACCTCGTATCCAAATAATTTCCATGGTGATCAT
ATCCCTTGAGACATTAAATGGTTTTTTATGAATAGAAAGTAGTTGTAATA
AAATCCGCTGGGAGTTAATAGCTATGGCAATAATTTCAAAACGAGGCATA
TGATGTTCGTGACGTAATTTATGAAAAGGTCTATTTTATCCTTTTATATA
GGTAGAACAAAAACATTTAACACTCGTGATAGTTGGACCAAACTATTTGG
TATAGTAGAGTCCTCTCTTTTCTTTATGTGGTCAGAATCTTAGCATGCTA
TAATTATCTGTGTTGGGAGAAAAAAGTTTTTAAGAAATTTTCTTACCTGT
CGATGTCACTGGTTCTATCCATGATTTTGAATTAAAATTAAATTTTTTTA
AATTGTACCTGGTCCTCGGGGGTGGTTGGCCACAAAGTGACCCATTACAT
TTCTATGAACCAATGAAAAATGAGTTGAAATAAAGAAAGAACTGCTTCGG
GAGATTGACCTTTACTAGCAACAACAATCTCTTGCCAATTACATTTCAGG
ATCAAAGAACATATTCTTCAGGGTGATGATAAACATATAGAATCAATGCT
GCTCTTCAAACGAGATAGGCAATTAGAGGTAACTTCATTCAGTGATAATT
TTTTGATTCATGCAAACCTTTCTTAACAAAACAGTCTTAAGAAAAAAGAC
AACGTATAATTGATCTAATAACATCATGCGAACGATCGAAAATAATATTT
GGTTTGGTCGAAATATTTTTAGTGCAATATGGTTAATTTAATTTCTCCTT
TTCAAATATATTATTGACATAACTATATTGTAGAAAAGAATGCTCCACGT
TCAAACAGCTTATGAATTTCAAGAATTATGACTAAAATTTGTACCTAAAC
TCATACTTAGTTTCGAACAACTTAGATTATAACTATCTTTTGGACGATGG
TGGATAAGGAATTTGTATATGATTCGTTCTTGAAGTCTAATATGTTTACT
TCTACTATATTGTCACGAAACTTGTCAACGATCGGGATGCAgaagaaaat
agattttttatgaaaactatGTCATCTTCAAAAGTAAGTTCTGTTGTCTA
GNaccttttcataaattacgtcacgaacatcacttacctcgtATCCAAAT
aatttccatggtgatcatatcccttgagacattaaatggtttttatgaat
agaaagtagttgtaataaaatccgctgggagttaatagccatagcaataa
tttcaaaacgaggcaagtgatgttcgtgacgtaatttatgaaaaggtcta
ttttatcCTTTTATCTAGGTAGAACAAAAACATTTAACACTCGTGATAGG
TGGGCCAAACTACTTGGTATAGTAGAGTCCTCTCTTTTCTTTATGTGGTC
AGAATCTTAGCATGCTAATTATCTGTGTTGggagaaaaaagtttttaaga
aattttcttACCTGTCGATGTCACTGGTTCTATCTatgattttgaattaa
aattaaatttttttaaattgtaccTGGTCCTCGGGGGTGGTTAGCCACAA
AGTGACCCATTACATTTCTATGAACCAATGAAAAATGAGTTGAAATAAAG
AAAGAACTGCTTCGGGAGATTGACCTTTACTAGCAACAACAATCTCTTGC
CAATTACATTTCAGGATCAAAGAACATATTCTTCAGGGTGATGATAAACA
TATAGAATCAATGCTGCTCTTCAAACGAGATAGGCAATTAGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00051380TCONS_00051380Clytia hemisphaericatranscript
TCONS_00051381TCONS_00051381Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00051381-proteinTCONS_00051381-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_201supercontigscaffold_201:311642..315084 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.44	1.02	0.74	0.18	0.77	0.42	0.74	1.1	1.14	1.03	0.56	1.81	0.68	1.17	1.04	1.44	0.69	2.35	0.37	1	0.75	0.23	0.78	0.57	2.75	4.69	0.83	0.57	3.12	1.76