XLOC_031447 (gene) - C. hemisphaerica

Overview
NameXLOC_031447
Unique NameXLOC_031447
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_161:114586..123667-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031447 ID=XLOC_031447|Name=XLOC_031447|organism=Clytia hemisphaerica|type=gene|length=9082bp|location=Sequence derived from alignment at scaffold_161:114586..123667- (Clytia hemisphaerica)
GAGCTTTTGAATTCAATGTTAACATAGGTAAGAGTTTCATCATTTTTAAA GTCAAAATGGCAGATTTTTTCCTGAAATGAAGAAATCATGAAATGTGAAA TGAAATGAAGAAAAATGTGTTCTTCTTCTCCTAACTTCTTCTGACTATTT GAGTGATTTACTTGAAATCTTTTATCGTTAATCGTCCTGGCTTACTACTG AGGTAAAACAGCTTTCCAAAATAGGTAATAGTATTTATTTGAAACTATCT TATCTTAGTTTTATACAGTATATATTAGCCATTCCAGGTTTGCTTGTTTT TTATTTGACGCTCATGAAAATCTTCAATTTTAGGTCCAACTTTGACAAGT AATTGTTCTTTGTGTAGTTGAGCTATAAAATTAATATTTTTTTGAGTAAT TTAGAGCTTTCTTTAAGCTTTCCAACCATATATAATATGCAGGTGTTTGT AATATTCTATACTTTTGTCTAAAAATTCGTTCCAACTAAGGCCATTTGCA GAAAAATTAGATCTGCGGGACACGAAAATACCTGAGAAATCCAATAGACC TTTTCGCCTTTCCATCCGCCATCTTGAATTGTATGCAAAAATACAGGAAC GAAAATGCCGTGGTTGGATTTAGTTGGAAAGTATGCAAAGCATATGCAAG TTTACTCAAAGATTAAAAAGACTACAAAGCATCTCATAAATAAATATTAT AANTAAAAAGACAACAGAGCATCTTATAAATAAATATTATAATCATTAGA ACAATAAAAGATGGAATTTTTTAATCCAAAAAGAAATATTTACAGAATAA CAAAAGCCTTTTAGAAATTTGTTCTTAAAGACATAGCATATTTTGTTTTC ATGCCATAAAAAAAATCCACAAAGACGGAGTACACACATCAATCTTTCAA AACACGCAAACTGAAAGCAGTAATTATGACGTCACACATCATCAATGTTT TGATTTGATCATTTTTGGCGGCTCTATTCCCAGGAGAATAATTTACCGTC AGCCGAATAAGGATTATTTTTTACCTTTGCGGATGATTTTTCAGTTTGAG TTTATGTCTAATGTTGTGGTTTTTTGAAGTGCTTGTTCTAAGAGATGAGT GAATATAATAGTTTTTAGTTTTCAAGAGAAGCAAATTCAATCTTTCTTCT ACAAGATTACACTTTAATATAATGCCAATTATGCATGTAAGTTTTATATT AATACTTTCTTTTTGCATATGTTTTGCATACTTTCTAAGGGAATTTCACC ACGGCAATTCGGCCACCATAATTTTTGCATACAATTCAATATGGCGGATG GAAAGGCGAAAAGGTCTATGGTGCTACTCTCTGAAATTAATTCTTTCATT AAAGTTATTATTTTTTACTTTTCATACTTTGGCAAGCATTTTCAGCCTGA AAATGAGGACTAGAATTATAGAGACTGGTACCACTGAAAAATTTGACCCT TTTTTAGCCTAAAACAGTTATTTGCCATGGGGAATTTTTCCTCCACAGCG CTTTGATTACAAAGATAGGTAGGTTCAGCAATTTTAACTTCCACTTTATA ACGTTTTTATTGTTTTTTGCAATGCAATGTCTTCTTTTTCAAAAAAATGT CTTTTCAATTCTTCCTTGAAGTGTTAGCAAGCCATTACAAAAAGAATTTG ATAAAAGTCTGCAGTCAAAATGAAGATATCTGGATTTTTTTTATTGGATT TTGAAATTGGAAAAGCATCAAAAAGTGTATATTTCGGTGCCATTTTATAT GCCATTTCTGGGCTAAATTTTCAACCTCAAATGTCTAAAACAGTGCTATT TTAGCGGAACCAAAATCTAAATATCTCCGGAACCGCTTATCATTAGGAGG TGTATGACCCCTCATTTTTTTTCTTTTTTGAAGCTCTACAAGATGAACTA GGTTTAATTGCCACCAGAATAGTTTCAATTTGACCCTGGAATGGCTATAT ATATCATCGTGACTTCGTCTTCGTGAGAGTGGGTAACTTGCATCAGTGTC GCTAACATGCACAGCCCTCAAATGAATGACCTGTCTGGTCATTAAAATAC AAAGTTAAATCAAAACAAAAATGGTAGAGTAGAGCTGCAAGCGGAGCTGA ATATAGTTTATTTTAATGACCAGCCAGGTCATAGACCTTTTTTCATCAAA GAAGCCACCCTTGTTTTTATGGCTGGACTACACACGACCCGTGACTACAC AATTATTCAACAGGACGCCCTCTTTGAAAAAGGTCTATTCATTTTAGGGC TATGCACGTAGCCTCCACTGACGCAAGTTACCCACTCTCACGGTAGTCTA ATGATATTGTCGATTGACAGTCAACCTTCTTCTAAATTTTGACACCCTTC TTTAGAGATAGGAATAATAAGAAGGTTGGAATCACTGATAGACTCAAGAT TTTTTCCTCTCTGATTGCTGAGCAAAGAAGAATATAAGTTTCAATCAGCG AAATCTGACCTAGTCATATTATTTATATTTCTATATATAAAGAAGAGAAT GGGTCATTCCAGAATTTGTCTGTAACAGGGGGTGAACAGGATTTTTGAGG CAAAAGCTTTCACCAAAATTCAAAATTTCCAAGGTGAGAGAAGAAAATGT ATTAATTTCAACGGCAATTGAATTAAAAACTAAGGTGAAAAAGGCTTCTT CAAGCAAAAGACATCTATCTCTTTTTTGAATCCGGCATGCAGGAATAGTG TCAGGACACCTGCAGGCAACCTGGTAGGGTTAGGTATGGGTGTGTTGTGA TTTTCTCCTAATATAGCCTGGTCTGTAGTTTGTACAATATAAATAGCCGT CAAAAACACTTTCCTGGCATGAATCTGTGGCGCATTAGGACGAATGTGTT TTTTAGGACGAATGTGTTTTAGCAAATACGCCGGTCCAAACAATTCAAAA TTACGCGACAGTACCCTGACTATACAAGGAGCAAAACTTTTCAATGCAAT GCCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGACATGAAATCTCT CTGCTGATCCATTTTTTCCTTCAGGAATTATGGATTGAATGAAGATTGTG GTGTGGATCAAAAGATTCTTGCCAGAGCGGTACGCTTAAATACATCCAAA AGTATCCAGTGGTTAAGGCATTGGGTATTAAACATCGGAACTTTGCATTT AGTTCGAACCCCACCGGTGGCAATCTTTCGGTAAGTCATTTAGTCAGTCA GAAAACATAGAAAATAACTCACAAAGAACCAGAAAGTCAGAAAAACTACA AACAAGAGACTGGAAAGTACGAAATAAGTTCAGATATGTTTTTCATCTTT ATGAAGAAGCCACAACTAATTAAAAAAGACATAAAAGAGTGGAATTTCCG ACACATTTTGCGAAAGTACATGGATTTTCATCAAAATTTCCGACCACCAC TGGAAAAAAAATAAATTCTGAGGTTAATGTTAATGCCACACAGGAACTGA CATTAGGAATTTGTACTCCTCAATAAACATATATTGTACGGCTAAAACAA AATAGCACAAGAACTAAGTTACAACTTTATCCTTGACAAAATTCACAAGT CCTAAGGTCTGTATTAACTAAACATACAAGACATGCAAAAGCCTGTGTAC AAAGGTACAATAATACAATGTAGACAAGCATAGAAGAGAGACATGTAAAT GTCAAATTGTCAACAACTGTAAATGCCAGTCAAACATATGACACAAATTA GCATTTTATAAGTCATCTTAACGCGTCATCAACATAGATTGACAGCTAAA AAGAACAATACAAAATACATCAGAAATTGAACAAATACTATGCAAAACAG CTTTAGAAAGATACAAAATAGAACAATAATAGATAGACTAACAATACTAA AATACTTTACAATTCCCAATACAATTGACATAAACTAATACACATGAGAC ATTAAGTAATAATGATTAAGTGACAGTTATAAACGTTTTACATACAAAAT ACCTTTCAAAATGGATTTACAAACAAACGCTACAGAACAAAAGATAAATC AAATAAACGTAAAATCAAGAGCCTGACTGGCAGTAACAGTTAAAGAAAAT TTAAAAATGCACGTCGTCCAACGAGGGGTAACAAAAATGTGGGCTTGAAT CTGATTTCAACAAAAAATGGGTCGTCCGCCAAAAATAATTCTCGCCAAAT TTAGAAAATTCATTAAATCGCCAAAATAAATTCCTCCAAATTGCACAAAA AATGGACTAATTTGCCAAAATTTCTTCTCAGTCTCACCAAAATTTACCGT TACAGGGAAAAAAATAGCATAAAAATACTGTAAAAATACTAAAAATACTG ACTAAATTTTTTATGATCAGCTTTAAATGGGGGAGCTATTGGATTGGTAT TGGATACGGTATGAAAACCAAGAAAATTAGACAATCTTGGAAATCTTACT TAAGGGAAATACAGGCTAATAGAAATTTTTGTTTGAGAGGTTTAATGGTG TCATAGTGAAATCGTAGTGTAATACAACAAAGTTTTAGTTTCAGAGTCAA TGTTCCTAGAGGGAGACTTGATGTTTGGATGATTAATGATGAAGGGATAG GGGTGATAAAAGGAGAGGTGGGAGGGAAGGCAGGCTGCATCATTTGAGGC TAAAATGTCTGAGGAGTGCGATCAATCACACCCCATAAAGTAAGTTTCAC AACTGAAAGTTGTGCATAGCACTCCTTATCACACGCCTAAATTACTAAAA TTAAGGTTTTAGGAGTGTGATTGACCACACACCTGAAATTTTCAAATAAT GCAGCCTGGGAAGAGGGGGAAAGGTTATTATCAGAGGGTGGGTGGGGTTT AGCCAGTGGCGAGCTTGGTAAAGGTATGCACGTAGGTGAGCTTTAAAAGT GGGTTTGCTAGTGATTTGGTCAAGGGAAGGTGATGAGTGTGTATTTTGTT CCAGTTTTTTGTGATGAGATTTGCTATGTTATGGCATGGTTTCAGCCCAC TTTTCAGGTGCCCCCATTGAGTTTTCCTTATGTATGGGTTACTTTCCACA GCAGAAATTCGAGAATTTTGTTTACTAGCAGTTACCAGGCCTATAATGTA TTGGTAAATATTCATTGTTAAATGAAAGTGAAAGTAAACAGAATTATTTC TTCACAATGTCACAAAGTTGCATAGGAGTGGTGTCTTTGATATTTCCACC CGAAAATGGGGGTGGTACCTGAACTTTTTTCCCGGAAAATAGTTACTACC CTGGTGAAGTAAATGCAAACAGGGGTGGTGCCTAAAATTTCTTTCTGAAA ACAGTTACTACCCTGGTGTAGTAAATGCAAACAGGGGTGGTGCCTAAAAT TTCTTTCTGAAAACAGTTACTACCCTGGTGAAGTAAATGCAAACAGGGGT GGTGCCTAAAATTTTTTCTGAAAACAGTTACTACCCTGGTGTAGTAAATG CAAACAGGGGTGGTGCCTAAAATTTCTTTCTGAAAACAGTTACTACCCTG GTGTAGTAAATGCAAACAGGGGTGGTGCCTAAATTTTTTCGCTGAAAACA GTTACTACTGACTACCCTGGTGTAGTAACTGCAATGGGTGGTGGTCCTAA AAAAAGTGCTGAAAAGGCTCTTACTACACATACTGTCTTGTAGTAACTGC GTGCTGATTTTTTGCACTAAGATGCGTATTAGCAATGCCCAAAACATGGC CTATTCGGATTTTTGAGCAAATTTTTTTTTCCGGCCAAAAATGCCAGAAA TATGCTGAAAATCGTCGTTTTTCAGATTTTTCACACAAAAACATTAAACC CGAACTTTCTATTTTTTTCCCTACTCCCCTTTCCTCTCCCCCAATCAGCA ATCAATGATAAAATTTAACGCATTATGCAATTTCGCTAAACGCCATATTT TCTGACTGATGGTTTTCATTTTTCTCCTTATTGCTATATCTAATTTTCAT CATCAGGTAGGTCCATTCAGCATCTAGCTTGTTTTGATAGTTTTTAAAGA AAAGCGTTTGATAGCTTTTTTACTTTTTTTTCAAAAGTTTTTTTCAATAG TGTTAAAAGTTTCTCCCAATAGATATGCTTTCATTATATTTTTTTATTTT GTTCAGTTATGTCTTATGTGTTTCATTGTTTCAATTTTCATAGATTCGAA AATAGGTTCGAAAATTTTCGAAAAATTAACAAGCGGGGGGGGGGGGGGGG GGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGTATCACTTGTTTT GTATGCGTTTATACAAAAACTGTTTGGTTATCACACGGACGAATTTACCA ATAGCTGAAAATATTTGGGTGGTGTCAAGTAGTTTTATGATAATTTCTTA GTTCATCAGATTTGATTTTAGTGTCTTTTATGGAAGAACCCCAAAGTAAA AGCTAATTTTAAAATATTTTTGTTACATTTTTCATTTTTCCCTTTGACTC CCAAGTTAGTTTCTCCGAAAGTCAGTTCTTTTCGGCTGTTTTTTTTTAAT TTTCTCCCGTCGCTTACCCAGTCCCCTAAAAGTCAACGTGGTCATATTTC CATACTAGAGAAATATGAAATATCGCAAATATCTCCATGCTCTTGACCAA TCAAAACGCTGACATTTTTTTGGGTCGGCAATAAGACGGTCTAGTGCATA ACTGATTACTACAGCTTTCATTATGATACCCCCATACGTCAGTGGGTGCA AGTAACTGAAGTAGAACAAGGGGAAAATTAGATATATTACCTAAAAATAA GTTTTGTTCAAATTGGCATGTAACATTCTCCTAAATTAGCACGTGATAAG GCTGCGAATAGTGCACAACGTGCTATAAAGTATAAGGTTTTTATTCTGTA ATACGGATCATTTCCACCCTGACTGGCTGAGGTAATTTATTATGCGGAAC TGAGTCAATAGGTCGTTGCAACTTTTCATAAAATTTTAGTACCATATAAA AGTATTAATTTTGCAAGAATTGAGTTTTGTGTTGAAATAATCTGCATTTT TGAGAAAAATAGTCCCAAGAAGACAAAATTTGTTCTTTATATTTGCCCAC TAAGGATGGTCTTTATGTCAAAATTTATCAAACTATTTAAGAACCTGTGT GTACCATAATACAACTTCTCTAAAATGGGTTATTTATGGCAAGCAAAAAG TCAACAACGTTTTTGATACTTTTGTATGCCTTAGATTTTCTTACCAACCC CCCTCCCCCACCCCTACTTAGGCTGGCCCCTATGCCAAAATACCATGATA CAACTTCTCTAAAATGGGTTAGTGGCAAGCAAAAAGTCAACAACCTTTGA TATTTTTGTATATATGCCTGGGATTTAGATACCAACGGTTAAGTTAAGAT CTGGGTTAAATTAGGGTTTGAAAAAATGTAAATTAGGATATTTTTGTTAA ATTGGAAATAGGGTTAAATTTCAAATTAAGGATTTCCTCTCTTCATAATA AAAGAACAGGTTAATAGTAAAGTGATTTGTCGTAGATTAAAATGTTTTTA ACATAATAAATTAATAAATGTTTTTAATGATTATGTTACAATAATTCAGA TTGAAAATAAATTTGCAATAAAAATGGTATTGAGTGAAGTCACAAAATCT GTGTGTCACGTGGAACGAAACTTAAAATGTTTGAAAGACATGCCAAGGAT TTCAGTTCAAAACATTCGTGATTTTCGTGGTGCCTTCAAAAAGGTATGTA TGTACACGCCAAATGATATTAGCGAGTTTATGTATCTGCACTTTTGAGAA CGGTAGAGTAACTGAAGCGATTTGGAAAAACCCGCATTTCTGACCCGCAT TATCGAGGACGGTAAAAGTGCTGATTTACCGTCGTCCTCAGCTGGCAAGG ATCTAGTCAAATTAGAACCTTACCGTCTCCGTCGTTGAAAAACACACATA CATAAACTCGGTATTGTGGAGTGTCTGTGTTTATAATACACATGGTGTCT AAGACCAGCAGGACACTCTACATGCTGTACCTGCTAGTTCTAGAAAAATT AGCTTGAAATCTTCCCCAATGGGAGAACTATTTCCCATTGCAAATAAACC AAACAGTACTCTCAAAATTTTTAACTCGTTCTGGTTCCTCAAATGGCTAA AGATTTTGTCATTGAAACAGGGGTGTATATAATGATAGTGTTTTCAGATT TTATATGTAAATAAATAATTTCTACTTTAGAATCTTTGATATACATATTT AATGAAATAAAGCGTCAGAAAATAAAGAGTCAAGATAATCTTGCAAAAAG ATTTTTGTAGCTAGAATACTCAATAAGCAAACTCTATATTTATCTAATTC TACTAACAATTCTTCGTAGAAACAACGTGTTGGGCGTGGTCCTGGTTCAG GGCGTGGCAAGACAAGTGGTAAAGGCCACAAAGGACAAGGTCAAAGAGGT ACAATGCCAAGAATTGGTTTCGAAGGAGGACAAACACCTTTTTATCGATT GGTACCAAAACATGGTTTCACTAATGCCAAGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049601TCONS_00049601Clytia hemisphaericatranscript
TCONS_00049600TCONS_00049600Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00049600-proteinTCONS_00049600-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_161supercontigscaffold_161:114586..123667 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
71.19 62.72 76.17 84.48 29.85 25.1 44.81 45.78 45.15 53.03 28.52 35.38 36.5 40.35 42.15 41.2 75.74 62.99 23.83 17.58 40.08 38.72 78.57 68.12 41.75 32.63 24.13 22.24 45.15 42.31