XLOC_031406 (gene) - C. hemisphaerica

Overview
NameXLOC_031406
Unique NameXLOC_031406
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_16:307518..314735-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031406 ID=XLOC_031406|Name=XLOC_031406|organism=Clytia hemisphaerica|type=gene|length=7218bp|location=Sequence derived from alignment at scaffold_16:307518..314735- (Clytia hemisphaerica)
TGAAAAGCAGAATAATTATTAAAATGACACAGTACTTACCAGCAAATCTT CTTGCCCTCTTCACTGCAAGACCACCAATTCCATTCAAGCCTCCGCCAGA TGGTCTTAAGAAGAGGAAAAATGAAACACCAATTATTGGGTTGACAGATT TCCTTAGAAACTTTGAGGTAAGAATTTACACTTTTTATGCCTTTATATAA TATTCAGATTCATTTTTGTTATTTAAGTCTACATTTAAATTTCAATGCAT AACTGATTGTTTAATTTTCATTTTGAACTAAATAGTCATTCTTTTTATTT TAGAGAATGACTTAATATAATATAAAAAATATCCTTTTTCAGACCACTGC ACCTCCACCTCCCACAAAAGGTGAAAGAAGAGAACAGAGGGAAGAACGAA AACGTCAAGAAAAGAAAGATTATGCTGATTCCAAACTAGAAGAAAAAGTA GCAACCTGTAAGCAAAATCATAACTTTCTTTGGTTTAAAGAAGTATATCT TTAGTACAATAGTCTGTTCCTACTTGAATGGGACTTATAGTTATGTGATG TGATGGTAGCCATTGAAAAAGCAAGAATCTGTCTACATTACAAATTGCAT ATTCACAGCCTTACCATTATGTGATGAATACTGCCATTTATATTTTTCAG GGGATCCACACAGTGACACCAATGCTGTTGGCGATCCATTCAAGACTCTA TTTGTTGGAAGAATTGTAAGTCCCTTTCTACATTGTTTATAGTTCTATCA GAATTCATCAAACTATTCTTAGAGTTTTCAGTTGCTGTCTAATTGCTTGT TTCATTTCTAGATAAAATTTGTAAAACTACATTATGTCAAGTTGTTGATA AACAAAGCCTTGTGTACAAAGCCTTATTGAATTTAGTTTGCTTTTTTTAG AAATATGAAACATCTGAAAACAAGCTGAGAAGAGAAATGGAAGCTTATGG TCCTGTCAGGAATGTATGTTTTTGTACATTCTTATTTGGGAAATCACTTT TTAGAATATACACTGTCACGTTTTAAGATTGCTCAATTCCTTAAAACTCT AACCCTTTCTAGGCCACCTGGAAAGACAGGCAAAAATAGTTTTCAATGGC AATGCACAGTTGAATTTAATTGGAAAAGACAAAAGTTTTTAAGCAGCCTG TGGCATTTATATTTATCATTGCTAGTTGTTAGTCACAATGTCGAATCTAC CCATGGGCCTGTCAATAAACACCCACAATGACAAATTTACTGGACATGGA CATGGGAAGGCTTTACGTTATCGAAACTGAGTTTATAAATCTTGAAGTGT CACTTGGAATTGAAATTACATTTTCTACCCTTTCCAATTTCAGATTGCAA TAGTGTTTAACCACAATTCGAGAAAGCCCAGAGGATATGCATTTGTGGAA TTCGAACACGAGAGGGACATGCACAGTAAGTCTGAATATTAAATTATGTC TAAGAATATAACATACTTTTAAATGGAATGAGATATTTAGAAGATTTGTC CATTCAAACAAAGTTCAAAGACTAAATTAAATATTTTTTTATTTATTTGT CAGAGCTTTGTGGACAAATCGAAAGGAAAACTTGGCATTAAAATCTATGG TGGGTATTGGTGGGTATAAAACAACCTCCAATCCAGCCAATTTTAAAACT ATAACACTTCAAAATTAAAGCATACTTTTGAATAGCTTACTTCTAATAAA ACATCTTCTATAATCCGTCGACTATCATCTGGGCAATTTAATAAAATACC TTTGCTTTCTACTATGATATTGATAATGGTGACATTCAACAAGTTATTGC CCAGATAATTTTAAATCGACCATTATCTTCCTATTTTTCTTTCTTCTCAA TCTGTCTCTTGCTTTGATATTACTTTTTGTGGAAAATAAAAAATTGTTCA TCAAAAGTACTGTGGTTGAAGTGGTTAGTTAGTTCGGTAAGTTTAAAAAG CTTTGGTTAATGCTGGTTTGAAGGTAATATGGAATATGTGGTAAGCTTGG TAAGTTTCAGTAGTTGTAATCTTCTTAGAATGCTACCACCCTTTTCCCGA ATGATCATTGCAAGAGTTGTGTTGGTAAGTCTGGTAAGTTTAGCACTCAT TGTTGAGATTGGATTATTCTGTAAATGGGAACTTTATGTAATTGTGGAAA ATTCATACATAGTCAACTATTGTGGTGAGTTAAAAAGGTATAATACAAAA CATAATAAGTATGGTAAGTTATGGTTTAAATGTGATCATGATGGATTTCC TCTGGTTTACGATTACGATCTATATGGTCAAATAGTATGTTAAAAGGTAT AGTATAAAATTTGGTATCAGTAAGTTTTCATTCGTTCAACCAGGTAAGGT TTGGCTGTAATTTTTCTCCTTAATAAAAGTTANATATTTAGTACCAGATA CTACTTCATTTTTGCTGTAAAAAATAGAGACACCACCCCCTAAAATCTTA AATTTTACAGATTAGACCAAAAGAGAGGGTTCGATGTTAGTTTTTCTGAC TGAAATGGACAGATAATTCAAACAAACTATCATTGATTAAGTCAGAGGCT TTTAAGTCCTTTGATTTTAATAACACACTTCTTGACCATTTCAGAAGTTT TGTCTTCACAAAAATCAAAAAATTTCTCAAAAGAGTAAAAAAAAGTTTCT CAATTAAAAAAAATTTCAAATAAAAAAAACAATATTTGAAAAAAGTCAAA ATATTACAAAAGACTACTTTTTTTATTGAAAAAGGAGCAAAACTCTGTGA AAAAGTACCCAAATAGTACCCTGTACATGCTAGAAGAGTGAAAAATACAC ACCCCCACCCCTAAAGTAGTACCGGGTACTAACTTTTTTGAAATGCAAAA ATAGACACCACCACCCGGCTATGGGTTAGTACCCTGCCTTTGTACCCTGC CTTTGTACCCCCCCCCCTGAGTCAACTATTGTGGTGAGTTAAAAAGGTAT AATACAAAACATAATAAGTATGGTAAGTTATGGTTTAAATGTGATCATTA TGGATTTCCTCTGGTTTACGATTACGATCTATATGGTCAAATAGTATGTT AAAAGGTATAGTATAAAATTTGGTATCAGTAAGTTTTCATTCGTTCAACC AGGTAAGGTTTGGCTGTAATTTTTCTCCTTAATAAAAGTTATGAAGACCA AGGTAAGGTTCTTGCATATTGTTCGGTATCGGTAAGTTTGTGATTAAATG AAGATGCAGTAATTGTGGTAAACTTTGTAAGTGGTTTGGAAAATTTGAGT CTATTTGTTCAGGTAAGGCTTCCAATTTGATTGGTAAGTGAATGAAGTTG ACAATCGAACGTCTGATTTCTGATTAATCAAACGAATGGATTTAATAGTA AGTTATTTGTGTTGTCCTCTGGCTAGGTGAGTTCTTTGTTCTTTAGTCTT TAAAACCTTGGTGAGTAATTGCTTATGCACCTCTCTTTCAAATTGACCTT GGTAAGTGCTCTGACATGGTAGATTCTTTGTAAGTTGGTCTCGGTAAGTT TTGATGTTAGTGTTGGTGTGATTAATTTTGGTAAGTTTTGCCCTCTCCGG GTGCTGATGGTGGTACGCTAGAAGTTTGATGTCTTGATCAAATGTGAGCC GTTGTCTTAATCAAAAATTCGCCAGTGAGTAAATCTTTTCTTCAAACTTC CCTCGCGAATTCGATAGCTAGTTTTAGCTATACTAATATCAGTTTGTCAT AGTTTTTGAATAGAAATTATTGATCATCAATTTAATATAAAACCTTTTTT GGTAAGTAATATTTCTTTGAAAGAAACAGTTGAAAGCACAGATTATTATG AAATGAATATGGTACCATAGAACCAGACAGATAGTTTTATATCTGGCACA ATTCTTTCTGACTCCTTTTCCCATTTTCTTCTGCAGGTGCTTACAAACAT GCTGATGGTAAAAAGATTGATGGAAGACGTATTGTTGTCGATGTTGAAAG AGGTCGTACCGTCAAAAGTTGGAGACCTCGTCGCCTAGGTAAGTAGAACT ACATTCAAAATCAATCTTGAAATGGATGTTTCAATTGTCTGAAATGCTTC AATAATAGAATGAAAATACGAAAGTAGGATACAAATGTTTTGAGATGTTT TAGAGTCAAAAAAACTTTCAGCTAATTATCAATATTGATTTTCTCTTCTT ATTTTGACAGCATGGTTTCCCCTTATCCATTTCTCCCCCCTCAATTTGGA ATTTGATTTGTACTGTGCCCTTATTTCCTAATCCCCCCTTAAATCTTCTT TTTCTTTTCTAAAGTGCCCCTTATTAAAGAAGCTGACACACTTTGTAATA ACACCTGATGCACTTTATAGTAAAGGGAAATTCCATCCAAAACAAAAATT TTTCTAAGATTTCAAAACCGTTAAGACAAGAAATATAACAGGATGTAAAG GTTTTAGTTATAAAAATGTATGTGAAGCTGTCTGACATGCCTGGGAAATC AGTTAGAGGAGACATTCAAATATTTTCTCTTTTGGGCAATGGGTTTTTAA TTTTCCTTTTAATTATGAAACAATGACTATTTTTCTTTTCATAGCCGATT AATACAATATTTAAAAATTTGGTTGGTTAAAAAAGTCATTGATTATTTTT TCAGCCAGAAAGGTTTTCATTTGTTTCTATCAGGGAAATTATCAATATTA TTCTCTATGATAAATGTTTAATCGACCCATGACTAAGACAACTGAAGACA GTAAGGTCATTCATTATCTTGCATTTTTAGTATTTAGGACTGAACCCAGT TTATTTTATTTATTTTTAAGTCTGAAACTTTGGATCTAAATCTTAAAATT TCTGTTTTAAATGTAGTGAAGCAATTTACAGGGCTTTTTACGAAGCCCTT TTTATGGCACTTAAATCTATATTTTATTACAAAGTGCGTCAGCTTTTGGT ATTACAAAGTGCGTCAGCTTTTGGTATTACAAAGTGCGTCAGCTTTTGGT ATTACAAAGTGCAGCAGGTATTGCAACTGTGGCATTTATTACAAAGTGTT TTTATTACAGGGGCCAAAAATCACCCAACATTGCTGGGCGACAGAGAAAA TCTTTGAATTTTTACCCTTAGTTTACCACCTTAAACGGTATATTAAGTAT ATTTAAGTAAAAAAAAACTTTGCAAGAGTATGAAAAGAGATTTGGATTCA CATGAATTACCCCCCCCCCTTAAATTNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNCCCCCCCCCCCTAAATTCAAAATTACTTTTTCTTTGATCCCCTTAA AAATGAATACCCCCTCATTTCTGAAAATTTCAAAAAATTTGCCCTTAAGA TTTTGCCCAAAATTCAAGTCCCTCCTTATTTTAAGGGGGGGCTGGAACCA TTGTGACATTTGACGTTTGTTACGAATTTTGCAAGTTACAATAATTAAGA AATTGTGGTTAAATTAATTTTCCAGGTGGAGGACTTGGTGGCACTAGACG TGGAGGACCGGAAGATAATATTCGCCACTCAGGACGTGTTGATCAATGGG AAGGGTAAGTTGTTTTCCATTCAAATTTAAAAATACATATGAAAAAGTGG AAATATTACACAAAGAATACACGCTTTTTCTTTTATAAGAATAGTGTACT TTGGTTGAGGATGAGCATTTTTCTTATTTTTCTATTGTTCTAAACAATAG GCCTATTGTCTTAAACCCGAAATCTCACCCTGATATTCTTATAGAAGTTA TTCTTATAAAAGAAAATGCGTGTATAACTTAAGTCTCAAAAGTATAGTAT GTGGTAAAAAAGGACTTTAAAGCACCCCTTTATGTTGGATTAAAAGTTAA AAAGTATCCACAAACTTTTGAAACAGACTTAAGGTAGATCATTCAAATTG GGAAATTGTCGACCAAGAAGTTATTTTATTTGATTTAATACGCTACTTTT CTTATTTTATAACAGTAAAGAGCGTGAACGCGGAGGCGGAGAAGATCGTG ACCGTGATAGAGAACGCGACCGTTCAGAAAAACGTGAACGGGGTGATAGA GATCGTGACAGAGAAGAAAGACGAAAAAGAAGTCGCTCACCAAGAGACCG AAAAGACAGAGACAGGTAAAAGAAATCTGTATTCTCTATGCTCCACTTTT CGCGTAGATTTTTTAAAAAAGTTTTAAAAGCAATATCCAATAGGCCGAAA CAGAGTCTCGTTTTATTTTTTGGTACTGTTATGCTTACTTATTACTTTTC CTCCTTGAATGAATTTTTTCTTTTTGTCCGATAAAAGGAAATATCAGTAA CGTAGTCAGTCACCCAATGAATAAATTTTGATATCTTCATTTAAAATTTT CAGAGACCGCGAAAGACGACGAGACCGTGACCGAGGCGATCGAGACAAAG ACCGAGAACGAAGTGATCGTGGAGACCGTGACAAAGATCGAGACAGAGAA AGAAGTGATCGTGACCGAGATAGGGGTGACCGTGAAAAACGTGATCGCGG TGAGAGTCGCGACCGCCGAAGAGATCGCGATGAGAGACGAGAAGAAGAAT ATGTCGGAGATGCACCACCTTCAGGTAATGGTGAGAAGAACCATTACGAT AACGAGTTTCCGTACCGATCGGCAGAAGATGGGGAAATTAAACAGGAGGA AGTTGAACAGAATAATTACCACGTGGCCGATCAACGAGCTGAAGAAGGCG ATGATGATTATTATCAGTAAAAATCTAACGGCGAACATTGTTATTGCTGT GTACGCAGTTATCATTCTTCCTTGGTAGTAAAGACGAACATTGCGGAATG TTTTGATAGGGAAATGAATTTTAATCGGAAAGTCGAACAGTTCAGTGAAT GTTATGAATGCTTTGTCTCAAATTGGGAATTGAGGATAAAGGACGAGTCA GATGTCAAATTTGCATTTTGCTACTTTCACGGATTACTGAAAGCTTACCT TGACGATTTCAGGGCTAAAAATCAAACTATGTAATTTTAGAATGTTCCAG TCTAAGATGCACGATCTCAGTGTAAACAGGTATTATTTGCCTTCCCTTCG TCATACTTTGTAAATTTTATTATTATTCTGACAACATGACCAAATTTGTA ATGTTTTAATTTTTTGAAATATCGAGACTTTTATTATTTTATCCACCTTC TTTCAAATTCTTTTATCTTCGTATTTGAGTTTCAAATAACATGGTGTTGT TGACAGTTTTCTCTCTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049511TCONS_00049511Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00049511-proteinTCONS_00049511-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_16supercontigscaffold_16:307518..314735 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SNRNP70U1 small nuclear ribonucleoprotein 70 kDa isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
187.63 174.2 340.31 365.04 569.08 437.06 259.98 283.23 221.71 201.93 184.34 169.44 131.81 145.32 139 141.57 219.37 186.34 72.39 67.16 137.07 137.96 147.42 140.15 143.09 150.46 82.92 74.49 95.85 96.57