XLOC_031396 (gene) - C. hemisphaerica

Overview
NameXLOC_031396
Unique NameXLOC_031396
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_16:2404..9804-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031396 ID=XLOC_031396|Name=XLOC_031396|organism=Clytia hemisphaerica|type=gene|length=7401bp|location=Sequence derived from alignment at scaffold_16:2404..9804- (Clytia hemisphaerica)
TCCAAATATACATAAATGGAAGTATAAAGCAAACATTTTGCATTGAAACC AAGCTCAGCAATCAATCAATAGTTGATAAAGTTTTATAGTTTGTGATTGC TAACTGTATAGTCCCTGGAGGATTTACTTTGAAATCCTACGCGTTAAGAG TATATTTTGCATTGTTGTGGGATGGGCAATTTCANTTGAATCCTTCGCGT TAGGAGAATATTTTGTATTGTTGTGGGATGGGCAATTTCTTCAATGACAT TCCGATTATAAATTGGGCTCACTTTATCAAGGATAGAATCAGTTATCATT TGAACTGTGTACAGACATAACAAATAATTTTGGAACCAACTTGATTTCTC TCTCGACAAACTAATCTCAAGACAAGATGCCTGAAGTAAGGATATTTCAA TTAATCTTAATTAAACTGTTTGTTGACCAGTGTCATTTGGGAGTTACATT AGGGTACTGTTTCTTATTTACACGTTTTTTATCCAAATTTTTTTGAAGCT TTCGGATGTTCTTAACTTTTTGAGTTTTAAGCCTAAAAATGTTCTTAACA TGTTCTTATTTTGACCATTTTGGGAAGACTTTTGACCATTTTTCTAAGAA ATAGGGTGTTTTTGAGTTCACAAAGCCTTAAAATGTTCTTAACTTGTTCT TAACATTTTTGCCAGCGAAGCCTTATGTTCTTATATAGTTTGTTCTTATA AAAAGAAAACGTGCATTTGTTTTTGTTTACATGTTGTTGGAGACGCAGAA GATTTTAAATCAAGTTTGTGAAGAGTATGTTTTTGAAACCATGCGCCTTT AAATTTTCGTATCGATGAGCTGACACCAGTGACTATTTTTTTTAGTATTC CTTTTTGTGTCAATTCCGGGTTTAGATAGGAATGTATATATCACGGATGT GGCGGTTGATTTTTTTGAAGGACTCCGTAGCGAGCCTGAACCTTTTCTTT CCTGCTAAACTTACTTTATATCTAAAAATTACTTTTCAGACGAGTTCTAG ATCTGGCTTGTTTATTTTGAAGGTATTTCTTATACAGCATAAGTCAACAA AAAGTACATCGCTTGTAACGATATACAAACAAAAGCGGAAATAAAAAACT CTTTCGTTTCGACAAGAAAACACTTTATAATGTGTTGTGTAAATGAGAAA ACAATCCTTAAAAGGACAACAAATGGTGTAAATAGTTTATCAGAAAAACA AATACCTCATAATTATGATTTCAAAACAAAGTGGATTAAATGAGGATTAG GAATTAAGAAATTTTTTTAAAGAGATTTTATGTGATTTTAGCATTATGAC ATCATCTCTAGACTGCCTCAGATTGCACATAACTGTCATGTTAAGTTTAT TTTTATATAAGTGTATTTTTTATACTAACTTGCTAGCTCTGCAAATACTT AGTATCCAAAATTACGAGAAATAGAATTCTATTCTTCCTCCCGAAAAAAT GACAAAATGGATTTCGCGTAAATAAAGTTTTATTTACGTTTTGTTTTTAT GTTAGAACTGCACCAAATGCGATGACCCAATCCGTGATACTACCGTGACA TTCGAAAAGAAACCTTATCATCCAGAATGCTTCGTTTGTCATCAATGTCA AAAGAAGTTATCAGGTATATATCATGTTTTTTTGCCTTAGTGAGTGTGTC CAAGGATACTTAACAGTTTTTATATGAAACTATCCTAATCTCCTTCATTT TACTAACACCTACACGTTTTTTATGAGAGCATTCAAAAAATTCTGAAACC TTTTGATATTAATAACTTTTTGAGTCAGGTCTTAAAATGTTCTTAACGTC TTGTTATTTTCTCCATTTTGTAAATATTTCTTTTCCCTTTTCTTAAGAAA TCGGGTGGTTTAGTGTCCGTAAAGCTTTAAAATGTTCTTAACTTGTTCTT AATATTTTGGCCATCAATGTTTTTAAAGTTTGTTCTTATAGAAAAACGTG TAGTGATACCTTCAAGTTTTCCTTATTTCATACTTGTCAACTACAAAATA AAATATTACAGACTGATGGGTTGTTCTTAAATTGTTCTGATTTTTTGGTA TTTATTTGAGTCTCGTTGTTTTTGTAAAAAGTTGACAAAGAAGCATTACA CATTGTCTTTTCTACATTAATCAGGGTTATCTGATAGGCAATAAGCAGTT GAGATCTCTAAGCAATTACACTATGAGTTTTGGTTTCCTCAATTGTAAAT TAATTTGAAATGAAAAAAACTAACTCGAGTGGCCGGGGCCCGGGGGTCTA CTACGTAGGTTTGCAAAGTGACGGGTATGTCCGAGCCAAAAATCGAAAAT CGACCCTAAGAGAGAAAAAATTGGCATTTTTGGGTCCCTTAGAGAGATCT TCTCAAAATTTTTGTCGATTTTCACTCGATTTTTATCCAAATTTTAGAAA AACACCACCCTTTGAGAGAGGGAACCGACCCTTACCGTCTGCACATACCC AGCACTAATTTTTGCCTAAGTACCCCCCCGGGCTTGAGTGCCGTGTGCAT TTTATCAAAAGTTGAATTAAATTTACTAACACCAAGAAATTTATAAATCC TTTCCTAACACTTTTCATTATCTCACTTACAACGCGTTAAGTTTTATAAA CATTAGGGTTAATATTCTAAAATTGTGGTATTTAGATATGTAAATCATAA ATGTTAAGATAGGTATCAAAACCACTTTTTGAGCCTTGGGCTAAGAATAT GAAATTGTGTTATTAAGATAACTCAAAAATGTTTAGGATCGTAGTTATCA AAACCACTTTTTGAACCTTACATCATTTTACACCCCCTTACATTCAATCA CTTTTTGCACTCCGCTCTTCTTCACTATGTGGTTTTCAAACTTGTTCCAA CATAATTTCGTTACTCTTAGCAACCTAGCTTAGTTACCCAGCTATCTTAA TCATTAGGCAAATAATCACAGATAAATGAGAAATAAAATTTCAATAAAAC CGTGTTTAAACGTGGATTTTGCACACGGAACTATAACCTATAGCATAGAA ATCACTTTTCTAAGAGTCACATTCCACGCGCAGTTTTATAACAGCTTCAC TCAATGCAACTGTGATAATTAATTAAAAGTTCAAGAACTACATTTGAATT CAAATCTACTCAAAACGTTGCGTTTTATTCTGTGAATAACCACAGCAATT CAATTCGTCTAGACTGTTTCATAATAACTGTACTGCCCTCCCTCAACACA GAAACTTTATCGCTCCGTAAAACAATTATTAAAGCTAAAATAGTCTGATA GGCAAAATAAAGAGTATTCTAGGCGTCTTTTGTAAGACTGGCCTCGACTC GATGTGCGCTGCACACCACTTGATCATTTTTTTACGCTGGTGCGTTATCA TATTAACGGATATAATGGAGGAGGCGACCCAATTGGTTGAACATAAAGTC AAAGTCATTTTTCAAAATTCCTTTTCGGACCTTTCGGCCTCGGAAAGCTG GACTCAACGTGTAAAACCCTGAAACAGGTCTTTAATAACTCTATCTCCTT GTTTGAAAAGATAACCAAAAAGCACTAACTCAATTTTAAAGCACTAACAC TTTTTCACTAAAAATAATGCAAAAATAACCTGGCAGCAGATACTAATTTT CCGCACTATACGCACAAAAACGCACGCACCAACACATACATGCATTCGCT CCTTTCCCTTCAGGCAAAGCGATTTACAAACATGAAGGTCACAACTATGA TCAAGAATGCTATGGAACGTTTCACGCCAAGAGGTGCGCAAAATGTTACG AAGTTTTAACCGACCCTAAAGTCTCTTACGTACAGTATGACGGGAAGACG TTTCACCCGGATTGTTTTACGTGCTCACGTTGTGATAAAAGTCTTGCGAA ACAACAGTTCTATCTTGACGGCGAAAACAAACTATGCGAAAAATGCCATT AAGGCTGACCACATAATAGGGTCTTGATGATTAAATGATGTTTTAATCAT AACGTTGCCCTTAAAAGGCCGTAGAATATTGTGCACATAAAAGATTTCTA TAATTGCTAGCTATGAGGCTATGACGCAGAATTTGCATCAGAAATCTGTT TGGAAAAAAAACTCTCAAGTACTTTGTCATGGGAAAGTCTATAAAGTTCG TAAAAAGTTTAATTTTAGCCAAATTTCAGGGTTTTTATGTAAAATCTTTT GGTCTTGCTTTCATTAAAAATAACACGTAACTAGCATTTTTATCCCGGTG CTTGAAAGTATTATTCCTTTTGGTGATTTCTATAAGCTACATAAAATATT ATAACACTACAAATTATTAGATAATTTTTATATAGAAACCTTATTTAATA CCTCACCAAATTCAGTATAACATTTGAAATGGGGTCTAATTTCTTAAAAC AATAAAATAGTTTTATATCTTGGGGGAGGGGGAGATGGGACAAAAAGAGT TTTTGATTATTTTATCATATATATGAAAATATAAATTTAATTGTACATAT TAACAATATATCAAATTTTAGTTTTTATTTCAAAGTTATTTCCACGAAAA TCCTAAATTCTGCAGTCTTGTTTTTCAACACTAACTAAAACACAAGTCAG GTTAATTCTGGCCCTTAAAGCTCGATCAGCTATTCCAGGAATGGTCTGTA CCCCTATGTTTAGGAGGTGTGACGTCCATCCAGGGTGGTCTGGAAAATAA AAATCCAGGGGGTCTGGGTTTTTCGATTGTAAAAACCCAGGGTGGTCAAT AAAATGAGGTGACAAATCCAGGGTTTTCAGTGAAACGAGGTCGAAAATCC AGGGTAGTCGAAAAAAAAGTGAAAAAAACCAAAGGGGGTCCCTCCCAAAA AAAGACCTCCTCAACATAGGGGTTACACATTTTTCTGGGATAGACCGATA CTCATTCTAAAACATAATATAGATGAAAACATTCTTTATTCTGATTTAGG GTCATAAAAGTCATTTAACATAACCATAACAAGACATCATTACACTGTCT TAGAAATACCCACGAGACAATAACTAACATTCAACCGTCAACCATTACAG CTTTCATAAAATCACTGATCACCATGTTGTGTCTAATACATCTTTTCGAC CGTAGCCGCCAATTGCCGCGCGTGCACTTTTTGTCCGCTTTATACCACTA AAACCGTCCCAGTCCTTTTTCGCCTATATAGACAGTAGAAAAATGTGTCC AAAAAGGATCAGATCGAGTTTAGGGGGATAACGACTACGCGACTACGCTA TTGTCTTAAAAGTGTCTCAGACTCACCTAACATTATTAGGGACTATTAAT AAATATATGTTAGAGAATATGTTCCAGCTTGGACTCCTCATAATCAAGGA CAAGAACTACATTTGTTAGCAATTCTACCAACGATACCAGACCATCGTGA CATCAATACATCATCATCATCATCATCAAAACAAACTATCATACATTTAC ATACCAACGCTTTATTCATTAACTGACTTTAGAGGCTTTAAGAAGATTAC AGTAATAACCCAAAATATCTTCTTTTTAATTTCACTAATATTCAGGCAAA TCTATCTTCCAACATGAAGGACACAATTATGACGAAGAATGCTATTCCGA ATGTCATGCCAAAAAATGTGCAGTCTGTGAAAAACCGTTGACAGAAACAA ACGTTAAATTTGTTGTTTATGGTGGCGAACAATTTCACAAAGATTGCTTC ACTTGTTCTTCGTGTCATAAATCACTCTCAGGCGAGAAGTTTTTCACTGA AGGAGACAGAAGAATCTGCACCGAGTGCAAGTGAAAGATTTTATATTTTC TACCTATACCATTAATTTACTAAAATATCAGTTTTAAATTTTGTTCGAGA GCAGAATTTTCTTAACTTTTTACCTTTTTTTAACTAATAAATAAAACTTT GTATTTTAACAATTTTCAAAATAACTTGAATCTAAAGATAACTATAAGAT TTTAAAATGTTAAAAATTGTTTTATCTTAGGGAGGGAAAGTAAAAACACC GTATTAGGGTCTATAATTACCATTTCAATTTCTAAGACAACACTGTGTCA CAGACCCGCTGGGAAAATTTGCCAAAAACTTTGTACTCGGTAGGAAAATA CCCTGAAATTTCAGCCCACTGGGAAATTGACTTTGATTGCATTCCCATCT GAAAATCAATTTTTAAAAACTGCACTCAAAAACCATCCCCACTAGATTTC TTAACCTTAGAACAATAGAATTTATATCCTCATTTGCGTTTCGATAGGAA GTTTTATCTCCACTGAGGAAAAAAGTTCCACTGGGGGCTGTGAGACAGGG GTGTTTTAAGAATTTGTCTTTGCTTCCAATTTCATTTTGACAGATAAGTC CAAAGAAATTTTAGAAGGTTTNTTACCATTTCCCAGCTAGACCATAGCGT TTTTCCATCGCTTATGTAACGTCATATGAACGTTGATTTAATGTTTGTTT GAGATTAAGGAAAGTAAACTTAGTCGACCAATCCACCAAATTAAGGCACC ATATTAAAGGAAGACCCTCCATGATTTATATTAAATCGGTTGNGGAAATT TGATTAGTTTCGACCAAGCTCAAAAAATCTGTGTGAAAAAATGAAACAAT TCTATAGAATCTTGACTACACGGTCTTTTTTTATTAGAAGTCAGTTTATA AAGAACATTTAGGCTGAAATTCGTCGAAAAATTAAGAACATAAGAACATG CCCAGCCTCAGTTTGGAAAACAATGACAAGAATCTACATTTTTTCCCTCT TTCCAAGCAGTTTTAACCGAACTTAGGAATGGATTTCCTAAAATTGAGAG TCAAATATTGTCCAAATTTTACCAATTTTAAGTTCTCTTTATTTTGCATG ATATTGTCGATTTAGAGTAGTCTGAAAAATTAAGAACGCATTTAAGAACA TTTTNGTTTTTGGTACCTAAAAGATGGCTCTTTCATTTGTGAACAATAGA ATGCTAAGCATGATGCGAGCCTGATGTAGGGGCAGACAATTGCTTATAAA AAAAAACATGTATGAAAGGTTTTAAGAAATAATGTAAATAGTAAGACTTC AAAATAAAAATATGTCTGAATCTAGTTCCTTGATACATAATAAAGGCCCT ATGTTTACATCAGACTGGCAACTGTTGTTCAGCACCTTCTTGGCAATTTT TCCTTGTTTTCCTGTACACAGTTCTCTAGCTCCAAACGCCCCAACCCTTT TATATCCGCCCTCTCTCCCTTCTGCTGACAGAATCAATACACAGGCTGCA AAATTAAAGTCTGAAATCAAATCACACTTTTACAAGTCTGCTAGTCTATG TCTATATGGGAAATCTCACTACAGTGTGTCTCAAAAAAAGCGGTAAAATT CTCTTCATAATTTATGTGAAATTCTATGACTTATATATTTCATATTTTAA TCTCAAAAACGTATTAAATTATGTTGGGAATTGAATATATATTGATTGAA C
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049487TCONS_00049487Clytia hemisphaericatranscript
TCONS_00049486TCONS_00049486Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00049487-proteinTCONS_00049487-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_16supercontigscaffold_16:2404..9804 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.1 0.02 0.24 0.41 0.6 0.29 4.46 4.81 8.24 8.57 3.81 4.92 171.97 133.57 228.89 168.22 91.29 104.62 220.71 267.37 80.47 78.84 41.5 51.39 30.38 37.16 219.97 190.1 82.02 124.5