XLOC_031217 (gene) - C. hemisphaerica

Overview
NameXLOC_031217
Unique NameXLOC_031217
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_152:97885..110105-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031217 ID=XLOC_031217|Name=XLOC_031217|organism=Clytia hemisphaerica|type=gene|length=12221bp|location=Sequence derived from alignment at scaffold_152:97885..110105- (Clytia hemisphaerica)
TTTTGACACTAAAATTTGAATATCTTTACAACCACTAATCCTCTGGAGGC CTATGACCCCTCATTTTCTTTCTTTTTCAAAGCTCTACAAGATAGGTTAG ATTTTGAAAAAAAAATTAAAACTTGAAAACTCTTCTGGAGCTGCTAGCCT GTGTGAGTGTGATTTCTCAACACGCACGCAACAGAAAGTGTCTATTCATT TTCATTTCATGGGAGTAAGATAACAATTATAATGTTAAAAACTGAAATTA TCATCCCATGTTATTTGTATTTTAGTGAAAGCAGTAAGTTTAACATAGCA TAAAATGGATAAAAGAATGAACTTAAAATTTTTTACCGGTAAATTGGCAA CTTCTACAATTTTTTCTGGTTGAAGGTTCACTTCAAAATCAAACCCTCCT TTCTGAGAGTCATCAACTGCATACTGAGAATTATCTTCTGACTTCCCTTC GTCGATAAAATTGTTCTCCGGACTGGCTTTTGTCAAAAGAGAATCGCCTT CGAGAGACTGAAGTGCATCTGTGAGAGCGTCCGCCATTTTCTTCAACTTT CTTGCCCTTGTCGATGGTTGTGGGCACACTTACTGTTTATTCTTATGGTC TCTTTGCTCAGACATTCTTTTGTACGTGGAGCCAGCGAAACTTTTTTCGC AAATGAAAAATTGGAAAACGGCGCTTGTATTATTAGCCAGTAGATGCTTG ATTTAAAATATCACAAAGTGAAATCTAAACGAAAAGCAGAAATTGTTGGA AGCTGGCTAAAAGACCCCCAGCAATGAAGCCCGTAATTGCAAAAGGTTCC ATCCACACGAGCAGGAAAGAAATATCAAAGTTGGGACTAAAAGAAGGCTG ACTGGACTGCAAAACAGGTATACCTATGTCATATTTATTTGAATTGATTA GAAATATAATATCCCCTTAATGAATCCATAGGTATCTTGCCAACTGTTTC CACGAATATTATTGCCAAAAAAAAAAAAAGAAACATATTAGTCATAACCA TCTATAATCAATCAATATCATCCACCAGACGATATCACCTACCAGGATTT TCAATCTGCGGACCTAGGCTGGGGCTCGGTTATTATCAGTTAGGGTTAGG GTTGGTGGCTGGAGCTTGAAAGTCATAATAGTCAGGCGTAGAAACTTTCG CGAGCTGAAACTTTCGCGATTTTCGCGAATTTTGGCCCTTTTCGCGAAAG TAAATACACGTCTTTAAAAATTCTAGGAAGGGCCATTCGCCAAAGTTTAT GCTCGCGAAAAATTCTTGACAAAATAGAAAATCTGTAAAACTTCAAACTT TGAATAAAATGTAACTTTTATGGCACTTTTTAGCCTGCTAAAAGACTAAT AAGTCAAAGGACAAATGTTTCAAGCCAACCCAAGAAGTATATGTGTATAT GTCTCTAAGCCATTTTTTCATGTGAAAATTCTCAATTTTATGTCTTGATT CGTGAAAGTTTATGCTCGCAAAAAATATTTTTCGTTAAATTCGCGAAAGT AAATGTCGTGAATTTCGCGATTTTTCGTCCTCGCAAAAGTTTCTCCTCGA GAAAGTTTGTACGCTTAAAGTAGACCTTTTCGCCTTTCCATCCGCCATCT TGAATTGTATGCAAAAATTATGGTGGCTGAATTGCCGTGGTTAAATACCC TTAGAAAGTATGCAAAACGTATGCAAAAAGAAGGTATTAATATAAAAAAA ACTTACATGCATAATTGGCATTATATTAAAGTGTAATCTTGTAGAAGAAA GATTAAATTTGCTTCTTTTGAAAACTAGAAATTATCAAATTCGCTCATCT CTTAGAAGAAGCACTTCAAAAAAACATAACATTAGACATAAACTCAAGCT GAAAAATCACCCGCAAAGGTACAAATATAATCCTTATTCAGCTGACGGTA AATTATTCTCCTGGGAATGGAACCGCCCAAATGGATCAAATCAAAACATT GTGACGTCATAATTACTGCTTTCAGATTGCAATTTAATCAGGATAGAAGA TAGGAAATAGAAAATACGGGGGAAATAAGAGAGGATGCATCCTGGTGGAT GATATTGTTTGCCAGCCGTGCTGGTGGGATTTTAGATTCAAGTGTCCCGC ATCTTTTTTTATGCCGTCAGTGATTTGTTATGCAGTTATGGTAAATTATG GCTGTTATTCATTAGATTGTCACCTTCCCCGCCTAAAGATGTATTCATGG TATTTTCAAAACAATAACTGTGAAAAAAACTATCAGTCAATATTTTTAAG TTTTTGTAGCGCATTTTATAGCTCTTTTTGGCCTGATTCAAGGTACACTT GAAATCAGTGCTTATAAATAGGAATAATCAGAAAACACCTACCGTCAAAA TAGGCCTCTTACTTATCAGGATGTCATGTTCAATAGTTGAACAATTCAAC CTTAAAGTAATGACACATCAATGCATAATTATCATAGTGTGCACCATTTT TTTTCTTATCATTGTTTTGATGCTGTAGTTTTTTGATTATTCAACATGAC ATATCATGATTTGCAAAATGTCTATTGGAGCAGGGGGGGCACCACAGTGG GCCCAGAGGTGGAAATAGGGAAAAAACGAAAGTTAAAATTTTGCTTTATT AATATAATTTATGGAATCTTGAATAAATTTCTGATCAGATNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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CGAAAATTTTTTTTTTTCTCAGACCCAACTTTGAAATTATGCTTTCCCTA ATTATCATTAAAATGTTCTCAACAGCTGTTAACCAAGTAAATTAAAAGAA AATCTAGCACAAAAATGGCTTTAGGTTGAAAAATAATCGCAATTTAGGGT AATTTCGAGCATGTTTTTGATGATATCACTCAAAAAAAGGGGTGGTACCT GGAAATCTTTTCTGAAAACAGTTACTACCAAGGTGTAATAACTGCAAAGG GTGGTGGTCCTGAAAAAAAAGTGCTGAAAAAGCATTTACATCATGTCTTG TAGTAACTGCGTGCCCCCCTGATTGGAGTTACTTTCATAAGCAAACGGTA ACTTTCATAGCCTTCAATAGTTGGCACTAACTTTTGGTCTGTAATTTAGA AATTACACAATTAGTTTGCTAGATTATGATATAAGTAAGTTATGTTCTGG CTTTCTGACTTATAGATAAGTCAGGAACCAGAAATATTTGTGATTTAGAG GCTTTAAAATTTGCTACACAGAGTAACCCCAAATCATGGTATACTATAAG TTAAAAAAAGAATAGAATGGTTTAAGAATAACTCAGCTGAATACTAAAAT AAAATTTATGTTTTTCTCTTTTTCTTTCTAGGTAATGTTGGTTACTGTTA TTTTTTGAATCATTTGTGATTGGATTTATTTTTGTGTTATTTTGTGTAAA GGTCTGAGCTTTAGTTTTAAGCATAGACACATAAGTATGTGGCAACAGAA TCCAGGTTGGGGCTGGCCACCTAATCAATATAATCAGTATTCTCAACAAC AAGGTATGTATTTAAAGTTAAACATTGATGATATTGTTTTATTTCAATAA AGATCTTTGGATATCAAACTATAAATTGTTTTTCGTTTCTTTCAGGCAAT TCAGCTGAAAATTGGGCCGCTGCAGCAGCACTATGGGCTCAGCAACGACA AATGCAAGATCAGTATCCACAAAGTGGAGGAGAGAGACCACCAGAACCCC CAGGTCCTCCCCCAGATGCTCCATCCCTACCTAATGATCAAAATGAGAAC AAAGTTGAGGTTCATGATTACAACCATGGAGCAGCAAATGAACAGACTCA AGTGTTTGATTACCAACACCAAAATGCACCAGCCGAACCACAACCACCTC CAGACTCTAATGTCATTGATTATAATCACGGAAAATCAGAGATGCCACCT GTAGATCAATACCAGTATAATAATTGGGACTACAATCAGCAGAACTGGCA AGATCCAGCAGTTTATCAACAACAGCAACAGCAGTGGGCTGACTGGAATC AACAGCAACACAATCAACACAATGACAATCATCATAACCATGAACAAAAT GGTGGCAACTTTCATCACCAGCAGGATTATGATCAAAATGACGGACGTAG TAGGGACCGTAATCACACTCATCATAATCATGGGTATAGCGACCAATCAG GAAATAATACACCGGGTAAGTTGTCAGTTAAAGATAAAACAAAAAAATGC GTAGTAGCTTTTTTCTCTTCTAGACAAAAGATTAGCTGGGATTTCTGTTT TGGTAACAATTCAAAAAATACAATCAAAATGTTAAAAAAATGCCCATCAA TTTAATAATGAGTGAAAGTCAGGAAATTTTGTAAGGTTGTATTGTAGTAA TCCAAAGACATCTGTCCAGGTTAACCACTTTCAGCTCCATTCCATGACCA GGTTTGATATTTCTTTCCAGATCCTGTTGAGATGAAGAAGAAATCTTTGC CTCTGTGGTTGAGGGATGGTCTTGAGAAATTGGAAAAGAACAAACAAAAA CAAGAGAAGAAAGTCATTCCGAGTGCTAAGAGCATCTCAGGATATCAACA TGGTTCACCAACATCTTCGCCGGAAAAAGAGGAGGTATCCATCAATTTGT ATCAAACATAAAATTTAAAAAAAACTTTTTCTTTTTAGTCATAAGAGGAT TAATTGGAAATTTTGTCAATTCTCCCATCTTGCCCCGTCCCTAAACTTCA GTTCATCTGCAAATAGATAATAGTCGATANTTCTCCCATCTTGCCCCGTC CCTATACTTCAGTTCATCTGCATGATAATAGTCGATATAAAACTTAAAAG AGTTGTCTAATCGCCTGATCTCTACACTGAAAGAAGTTTACCATTTCTAA CCCAGAACCATAACATCGCATCAATAATATCTAAGAATCGATACAACGAG TTTAATTTTCCACTTGTAGAGTGATGCAGAACTAAGCGACAAAAGTGATA ATGAAGGGACATCGTCCCCAGTGAAACATCCACTATCCCCTCCAGCTCGT CGTCAAAAACATTCATCATCTGAAGACGAAGAAATTTCTGAAGAGGAGAA ACAGCGCAGAACTGTAAGTTTTCATTCTATATTCAGATGCATTATAATTT TGAATGTTTGTTTTTAAAATGCCATTTATCATTTATCAATTTTACCTATG AATTTGACATATTTTTCGGCAACTCTTATTACTTAGTTCACATCAATCTT TTCAGTTCTGTATTTTTGGCATATTTTTTGTTTACTGTATGACCTTCATG ATTGACTTTAATTGCAGATGTTGAAAATAAAAACTTGGATGACAGAAACC CTCTTAAAGGTTACAAATTCTGAGTTAACGAATGTTTGTGAAGAGGTTTT CTTTGAGATGAAACGATCAGGTGAGTTTATCAATCAAACCCTCTCTCCCT CCCTCTCCCTCTCTACATCCCAGATGAGATTTTTTCGTGTGTTGGTATTT GTGTAAGTAAAAGGAGAGACGACACAAAGATTTCGAATCTATTTAAAGTT GTAAATTAATATAAATCAAGAAAGTACATTTCCAAAACCATTTTCTTATA CATTGGTTGTCATTTGTATTTATTAGCAAAGACAGCGATTTACAGACCTA TCTACTATTTTGATTTTAACTGGAAATTTATTTGCGATTCTCTAACAGAT TTTTCACGTATTGCACTCCAAGCTACCCTCTGACATATTTTGCTTTTATT GGACTTATATATTCTTATAGCAAAGAACAAGGCAACCAATGTTCGACGTT CTGGAGGTTTGGAGTCTCTCCGTTCGATAGGTAAGTTCCTGTAGTTTTGT GAGGAAGCAAGAGGAAGGAGGCTTGGAGTAGATATCAGAATGAATAAAGT GTTTGATTTTCAAACCCGAGTGACGTGCATATACGTTCGAAATCAGCCAA TATACCGACTCCCAGACTTAAAGCTAAAACTCCTGACCAGTTAATGTTAC CGAATCCGTTGTTCAAGTTTTAGAATTCAAAAAAAAAAAATTGATTCAAA GTTTTTAACCTGGAAAGGTTAAGAATAGTAGCTCCTCAAAAGTGAAAATC AACACGCATATTTTCTTCAGGTGAAGATGACGTCACGAGTAGTGAAGAGG AAGAAGAACCAATCAAACCTCCTCCACGAAAATCTCGTTTCGATGAAAAA CCATCTTCGTTACCAAGGAAACCAAAAGCAACAACAGACGAGGAGGATAC ATCTCCCGCCCAAAAACCTACCAAAGCTGAACACGACATTAGGAAAGATG TACCTGTTGTCATTTCAAAGGACTCTAAAATTAAAGATAAGAGCGAGAAA CGTAACAACGAGGAGAAAACGAGTAAACGCAAAGACGTTGATAAGAAAAA GAGCCCGCAACATAAGAGTTCCAAAAAGAAAAAGAAGAGGAAATATTCGG ACAGTGAGTCGGACAGATCGGACGATTCGTATTACAGTTCGGACGAAGAA AGTGATCATAAGAAAAGTCGTAGTAAGAAATCTTCTAAACGCCACCGCTC GGACAGTCGTTCGCCCGTGCGTAAAAGTCGAAAGAAATCGAAATACGACT CGGATGATAGCGATCATTACGAAGAGAAACGAAGCAAGAAAAAGAAGAAA AAGGAACGCTATTCATCGGACGAGGAAAGTTATGATAGTGATTATTCTTC TCAACGTAAGAAAAAATCCAAGGGTAAGAAGCATAAACAAAGAGACCGAT CTATATCCAGGTAAGCTTGGTATATTTAATAATTACGCATTCATTCTATT AATTCCCTTCCACAACGGTTTTATCTCAATCATTCAAAAAGTTAGCTAGA TGATACTGTCATACTGTGTTTTATTCACGAAATCTTGACCAAAGGGACCA TTCACAAAGTACGTACGCTCGAAAATGGCAAATTTTTGACTCCCCCTCCC CCTTGTAACGCTTTCGTACGCTTTATGTGTACCCCCCCCATTCAGCGTAC GTACGCTTTTTATTTTTAGTACACCCCCCCCCTAACCAAAGTCGAAACTT GAAACTCTAGTAACAGTAGAATACATATGTAGGTATCCAATCGTATTTAT AACAAAGTCTCAAGAAATTAAAAGAATCTAAGGTGAAAAAAAATACCAAA GGAGAAATGAAAAATAACAATCGCAAAAACAATTTTTTGATGTGAAAATA TTGCGTTTTTCTCTCAAAAAAGACAGTTTAGGAAAAATTACGAGCGTACC TACTTCTCCTCAAGGACCCCCCTCCCCCCACGTACGCTTTCGTACGCTTT TGGGGGCACCCCCTCCCCCTCAAGAGCGTAGGTACTTTTTGAATGGTCCC AAACCTCTAATTTTGTAAGACTACAATGAATAAGTCGCATAAATCGTTTT GATTGTATTGAGTTAGATTTCATCTCATCAAGTCAAATTGGAACCCATGG CACCTTCTTACGCTTCTTTATGTTCATAAATATGTTAAATTCATTCACTT TAGCCTAAAGAGGTTCAGTTCGCGTCTTTGTTCAAGTTTTTTATCTTTCA AATATGTAGGTCACCGAAGCGCTCGAAGAAGAAAAAGTGACCCATGTGAT AGGTAAGTTAGGCTATTACTTGCAGAGTGCAGTTTGGGTTGAACTGACTA GACTTTCTTTAAAAGGTGATCAGGAACCACTGCTAGTGCTCAGGTTATCG GATCGTGGCAGCATGGAGGATATATATACAGAGATAAAGATTTATCCCAA AAACGACATTCTTTGAAACTTTCAAACGGGACATTCAGTGATTATAGAAT ATTATGAACATTTTTTAGATTTTTTCTTTAATTTTGTAAAATTTGTACAA AGAAGGTGAAAGGAAAGAATATTTTTACCAATTTATATCCATTTGTGTTT ACGTTCTTCTTACAAATATTGAAAAGGAAAATTGACAACTTCCAATTCTT CAGAATTCGAACAAGTTTGAAGAAATTGATTTTCGGATATTCTAGAATAA AACATCTCTACAAAAACTTTCGATTTTGGATTGTTTATTTCGACAACAAT TTACAATAAATTATAAAGCAATAGATTAGTATTTAAATATATTAGTATCT GTTCATTATAACATTATTTTTGCTTCTGCTGCCTGCTACGGCACGGAACC AAATCTTGTAGTAGTAGCGATTATTGTGATACACTCTCAGTGTCTTTGTG TTCTCACTGTTCCCCAGCTCCATATGTTCTAATGACGTCACGGATAGGTG CTCGGCACATGGGGCAAGTCTGTCCGTTCATTTTCAAATGTAATGCACAA GAGTGACATGCGCACATGTGTCCACATTGATAGAAAACTGTATCAATTGA TTGGTCGATGCAAATAGCACATTGTCCTCTCTGGACAGGTGTTGTGTGGT TGTTTTGTTGAATGTTCAGGATGGCACTTGACGTTGGACGATCTTGTTGG TCTAAAACAGAATGCAAATTTGTATTAAGAGTTATGTTACCGAATACTTC CAGTAACATCTGTGCAATTCAGCCCGACAGAAAGAATTCAATAATATTGG GTTGGTACGATGATGATAATAGTAGTAAGATTAATTTACGTTGGAAAATT GTTGCGAATTCTGTGTTTAAGGTTCAAAAACCGTAGATAACTTCTTTCAT TGAAGAAACTTACCTGGTTTACTAGCGAGATAGTCGCTCATGAAAGCCTG AAAGACAGCTGCAACTTCTTGTCTAACAGCGCGTTGAGTATCAAGTTGTA CTTCCATCGTCATTCGAAGAAGTTGTTTCATTTCGTTCAGTTCTTGTTTA AGCTCTTGAATCTCGTGTGGTGAGCTGGCTCCTCTTTCGTTGATTGTTCT TAATGACGTTGGGCGTTGAATCGGAGGACGTTGTCTTGGTTGTTGAGAGC GAACGAATGGGCGTGGCGTTGTGGTGTTTCCACCTAATGACTCCACACGT TGCTGAAATAGGCAAACTTAATTAATAACTAAATTTTCAAACTTGATTTT TGTATGTCACGCTTTGATTAACTTGGTTGGTTTTTTAAAAGCAGAAAAAA TGTCTTAGATTAATGTAATTGTAATTTCGAAAGGTTTGGATGTTAAGATT CTTACCTGAACCATATTCTCCAATTCATCACGGAAATCGTCTTGTAGCAT ATTACTGACAACTTGTAGACTTTGTAGACGAGTGATGTCAGTAGCTATGC TTTCTGTTAAGATTTGTACACTTGCTTGCACTGTTGATTGAAGTAATGCT GGATCAACCAAAGGCGTTGTCGAAGGTGTGGATGTCCCAGGTAATGGTGG TGGCGGTGGCGGGTTCGATGTTCGGCTGGCGGGAGTAGATTCTTGAGGTT GTACACTGTAAAATAAATATTAATAATGTCGAATGACATTTAAGTATCTT AGCAACAAAACTTTGAAAACAAGAACCAAGGCGATTTTATGCATTTAGAG AAGTGTATATTAAAATATCTTTCTTGGGAAATTTAACCCAGCGCATAGAG AAGTCATCTGTAAGTTAATTAGAGAGTTTTTTTTACCTTGACTGTTGTCT TTGTTGTCGTTGAGCGATCTGTCTACTGAGTTGGTCTCGGAAAGATCCTC GTGCTGGTTCCGTTCGATTATTGTCATACCTTCTTGGGACGGGTCTTCTA GTCCCTCTTGTATTGCTGTTTGAGCTTCTTGCTGTTGGTGCAGTAGACCG TCCACTTAATGTCGCTTCAAGCTGACGTCGAAATCCATTTTGTATCGCGG AGCTTACTCTGCTAAGTTGTAGAAGGGATTGGACGTCATTTGCGACTGTT TCAGGTCTGTTTTGAGCTTCTTCTTCGGCCCTTTCTTGTTGCGTTGGCNT GTTTCAGGTCTGTTTTGAGCTTCTTCTTCCGCCCTTTCTTGTTGTGTTGG ACCATTGATTGCACGCTCAAAGAAGTTCTCGATACTAGCTCTCGCATTAC CCCCTGTTACTGGTCGCTCTCCAAGTTGGATTCTTCTAAGTTCTAAAAAT CTTTCACTGTAAAGAAAAAATAGATTTTATGATTGATTCGGAAATTTTCG AAATATTTATCACGCCTTTTTTCCTTTTCGTTATGATCGAATAAGATAAT ATATAACTAGCGGTCCCAGACCTTTAACTGATTAAAATGATAAATCATAT TTAGGACCTTCAAATCCGTTGGGAAAGTATCATTTACTCATACTTCTAAT ATCTTTCATCGTGGAATAACT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049127TCONS_00049127Clytia hemisphaericatranscript
TCONS_00049126TCONS_00049126Clytia hemisphaericatranscript
TCONS_00049125TCONS_00049125Clytia hemisphaericatranscript
TCONS_00049124TCONS_00049124Clytia hemisphaericatranscript
TCONS_00049123TCONS_00049123Clytia hemisphaericatranscript
TCONS_00049122TCONS_00049122Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00049127-proteinTCONS_00049127-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_152supercontigscaffold_152:97885..110105 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PNISRPREDICTED: arginine/serine-rich protein PNISR isoform X2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
15.13 14.03 9.08 6.74 52.55 40.03 23.58 25.78 18.34 23.34 24.1 16.63 21.44 21.38 16.1 20.4 21 21.98 15.82 16.93 16.79 16.94 15.98 18.7 20.56 20.75 13.27 8.97 20.75 19.1