TCONS_00049123 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049123
Unique NameTCONS_00049123
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4890

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049123 ID=TCONS_00049123|Name=TCONS_00049123|organism=Clytia hemisphaerica|type=transcript|length=4890bp
CTTGATTTAAAATATCACAAAGTGAAATCTAAACGAAAAGCAGAAATTGT
TGGAAGCTGGCTAAAAGACCCCCAGCAATGAAGCCCGTAATTGCAAAAGG
TTCCATCCACACGAGCAGGAAAGAAATATCAAAGTTGGGACTAAAAGAAG
GCTGACTGGACTGCAAAACAGGTAATGTTGGTTACTGTTATTTTTTGAAT
CATTTGTGATtggatttatttttgtgttattttgtgTAAAGGTCTGAGCT
TTAGTTTTAAGCATAGACACATAAGTATGTGGCAACAGAATCCAGGTTGG
GGCTGGCCACCTAATCAATATAATCAGTATTCTCAACAACAAGGCAATTC
AGCTGAAAATTGGGCCGCTGCAGCAGCACTATGGGCTCAGCAACGACAAA
TGCAAGATCAGTATCCACAAAGTGGAGGAGAGAGACCACCAGAACCCCCA
GGTCCTCCCCCAGATGCTCCATCCCTACCTAATGATCAAAATGAGAACAA
AGTTGAGGTTCATGATTACAACCATGGAGCAGCAAATGAACAGACTCAAG
TGTTTGATTACCAACACCAAAATGCACCAGCCGAACCACAACCACCTCCA
GACTCTAATGTCATTGATTATAATCACGGAAAATCAGAGATGCCACCTGT
AGATCAATACCAGTATAATAATTGGGACTACAATCAGCAGAACTGGCAAG
ATCCAGCAGTTTATCAACAACAGCAACAGCAGTGGGCTGACTGGAATCAA
CAGCAACACAATCAACACAATGACAATCATCATAACCATGAACAAAATGG
TGGCAACTTTCATCACCAGCAGGATTATGATCAAAATGACGGACGTAGTA
GGGACCGTAATCACACTCATCATAATCATGGGTATAGCGACCAATCAGGA
AATAATACACCGGATCCTGTTGAGATGAAGAAGAAATCTTTGCCTCTGTG
GTTGAGGGATGGTCTTGAGAAATTggaaaagaacaaacaaaaacaagaga
agAAAGTCATTCCGAGTGCTAAGAGCATCTCAGGATATCAACATGGTTCA
CCAACATCTTCGCCGGAAAAAGAGGAGAGTGATGCAGAACTAAGCGACAA
AAGTGATAATGAAGGGACATCGTCCCCAGTGAAACATCCACTATCCCCTC
CAGCTCGTCGTCAAAAACATTCATCATCTGAAGACGAAGAAATTTCTGAA
GAGGAGAAACAGCGCAGAACTGTAAGTTTTCATTCTATATTCAGATGCAT
TATAATTTtgaatgtttgtttttaaaatgccATTTATCATTTATCAATTT
TACCTATgaatttgacatatttttcgGCAACTCTTATTACTTAGTTCACA
TCAATCTTTTCAGTTCTGTATTTTTggcatattttttgtttactgtaTGA
CCTTCATGATTGACTTTAATTGcagatgttgaaaataaaaacttggATGA
CAGAAACCCTCTTAAAGGTTACAAATTCTGAGTTAACGAATGTTTGTGAA
GAGGTTTTCTTTGAGATGAAACGATCAGCAAAGAACAAGGCAACCAATGT
TCGACGTTCTGGAGGTTTGGAGTCTCTCCGTTCGATAGGTGAAGATGACG
TCACGAGTAGTGAAGAGGAAGAAGAACCAATCAAACCTCCTCCACGAAAA
TCTCGTTTCGATGAAAAACCATCTTCGTTACCAAGGAAACCAAAAGCAAC
AACAGACGAGGAGGATACATCTCCCGCCCAAAAACCTACCAAAGCTGAAC
ACGACATTAGGAAAGATGTACCTGTTGTCATTTCAAAGGACTCTAAAATT
AAAGATAAGAGCGAGAAACGTAACAACGAGGAGAAAACGAGTAAACGCAA
AGACGTTGATAAGAAAAAGAGCCCGCAACATAAGagttccaaaaagaaaa
agaagaggaaATATTCGGACAGTGAGTCGGACAGATCGGACGATTCGTAT
TACAGTTCGGACGAAGAAAGTGATCATAAGAAAAGTCGTAGTAAGAAATC
TTCTAAACGCCACCGCTCGGACAGTCGTTCGCCCGTGCGTAAAAGTCGAA
AGAAATCGAAATACGACTCGGATGATAGCGATCATTACGAAGAGAAACGa
agcaagaaaaagaagaaaaaggaaCGCTATTCATCGGACGAGGAAAGTTA
TGATAGTGATTATTCTTCTCAACGtaagaaaaaatccaagggtAAGAAGC
ATAAACAAAGAGACCGATCTATATCCAGGTCACCGAAGCGCTCGAAGAAG
AAAAAGTGACCCATGTGATAGGTAAGTTAGGCTATTACTTGCAGAGTGCA
GTTTGGGTTGAACTGACTAGACTTTCTTTAAAAGGTGATCAGGAACCACT
GCTAGTGCTCAGGTTATCGGATCGTGGCAGCATGGAGGATATATATACAG
AGATAAAGATTTATCCCAAAAACGACATtctttgaaactttcaaacgGGA
CATTCAGTGATTATAGAATATTATGaacattttttagattttttctttaa
ttttgtaaaatttgtacaAAGAAGGTGAAAGGaaagaatatttttaccaa
tttatATCCATTTGTGTTTACGTTCTTCTTACaaatattgaaaaggaaaa
ttgaCAACTTCCAATTCTTCAGAATTCGAACAAGtttgaagaaattgatt
ttcgGATATTCTAGAATAAAACATCTCTACAAAAACTTTCGATTTTGGAT
TGTTTATTTCGACAACAATTTACAATAaattataaagcaatagattaGTA
TTTAAATATATTAGTATCTGTTCATTATAACATTATTTTTGCTTCTGCTG
CCTGCTACGGCACGGAACCAAATCTTGTAGTAGTAGCGATTATTGTGATA
CACTCTCAGTGTCTTTGTGTTCTCACTGTTCCCCAGCTCCATATGTTCTA
ATGACGTCACGGATAGGTGCTCGGCACATGGGGCAAGTCTGTCCGTTCAT
TTTCAAATGTAATGCACAAGAGTGACATGCGCACATGTGTCCACATTGAT
AGAAAACTGTATCAATTGATTGGTCGATGCAAATAGCACATTGTCCTCTC
TGGACAGGTGTTGTGTGGTTGTTTTGTTGAATGTTCAGGATGGCACTTGA
CGTTGGACGATCTTGTTGGTCTAAAACAGAATGCAAATTTGTATTAAGAG
TTATGTTACCGAATACTTCCAGTAACATCTGTGCAATTCAGCCCGACAGA
AAGAATTCAATAATATTGGGTTGGTACGATGATGATAATAGTAGTAAGAT
TAATTTACGTTGGAAAATTGTTGCGAATTCTGTGTTTAAGGTTCAAAAAC
CGTAGATAACTTCTTTCATTGAAGAAACTTACCTGGTTTACTAGCGAGAT
AGTCGCTCATGAAAGCCTGAAAGACAGCTGCAACTTCTTGTCTAACAGCG
CGTTGAGTATCAAGTTGTACTTCCATCGTCATTCGAAGAAGTTGTTTCAT
TTCGTTCAGTTCTTGTTTAAGCTCTTGAATCTCGTGTGGTGAGCTGGCTC
CTCTTTCGTTGATTGTTCTTAATGACGTTGGGCGTTGAATCGGAGGACGT
TGTCTTGGTTGTTGAGAGCGAACGAATGGGCGTGGCGTTGTGGTGTTTCC
ACCTAATGACTCCACACGTTGCTGAAATAGGCAAACTTAATTAATAActa
aattttcaaacttgattttTGTATGTCACGCTTTGATTAACTTGGTTGGT
TTTTTAAAAGCAGAAAAAATGTCTTAGATTAATGTAATTGTAATTTCGAA
AGGTTTGGATGTTAAGATTCTTACCTGAACCATATTCTCCAATTCATCAC
GGAAATCGTCTTGTAGCATATTACTGACAACTTGTAGACTTTGTAGACGA
GTGATGTCAGTAGCTATGCTTTCTGTTAAGATTTGTACACTTGCTTGCAC
TGTTGATTGAAGTAATGCTGGATCAACCAAAGGCGTTGTCGAAGGTGTGG
ATGTCCCAGGTAATGGTGGTGGCGGTGGCGGGTTCGATGTTCGGCTGGCG
GGAGTAGATTCTTGAGGTTGTACActgtaaaataaatattaataatGTCG
AATGACATTTAAGTATCTTAGcaacaaaactttgaaaacaagAACCAAGG
CGATTTTATGCATTTAGAGAAGTGTAtattaaaatatctttcttgGGAAA
TTTAACCCAGCGCATAGAGAAGTCATCTGTAAGTTAATTAGAGAGTTTTT
TTTACCTTGACTGTTGTCTTTGTTGTCGTTGAGCGATCTGTCTACTGAGT
TGGTCTCGGAAAGATCCTCGTGCTGGTTCCGTTCGATTATTGTCATACCT
TCTTGGGACGGGTCTTCTAGTCCCTCTTGTATTGCTGTTTGAGCTTCTTG
CTGTTGGTGCAGTAGACCGTCCACTTAATGTCGCTTCAAGCTGACGTCGA
AATCCATTTTGTATCGCGGAGCTTACTCTGCTAAGTTGTAGAAGGGATTG
GACGTCATTTGCGACTGTTTCAGGTCTGTTTTGAGCTTCTTCTTCGGCCC
TTTCTTGTTGCGTTGGCNTGTTTCAGGTCTGTTTTGAGCTTCTTCTTCCG
CCCTTTCTTGTTGTGTTGGACCATTGATTGCACGCTCAAAGAAGTTCTCG
ATACTAGCTCTCGCATTACCCCCTGTTACTGGTCGCTCTCCAAGTTGGAT
TCTTCTAAGTTCTAAAAATCTTTCACTGTaaagaaaaaatagattttatg
attgattcggaaattttcgaaatatttaTCACGCCTTTTTTCCTTTTCGT
TATGATCGAATAAGATAATATATAACTAGCGGTCCCAGACCTTTAACTGA
TTAAAATGATAAATCATATTTAGGACCTTCAAATCCGTTGGGAAAGTATC
ATTTACTCATACTTCTAATATCTTTCATCGTGGAATAACT
Run BLAST on NCBI

transcript from alignment at scaffold_152:97885..109409-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049123 ID=TCONS_00049123|Name=TCONS_00049123|organism=Clytia hemisphaerica|type=transcript|length=11525bp|location=Sequence derived from alignment at scaffold_152:97885..109409- (Clytia hemisphaerica)
CTTGATTTAAAATATCACAAAGTGAAATCTAAACGAAAAGCAGAAATTGT
TGGAAGCTGGCTAAAAGACCCCCAGCAATGAAGCCCGTAATTGCAAAAGG
TTCCATCCACACGAGCAGGAAAGAAATATCAAAGTTGGGACTAAAAGAAG
GCTGACTGGACTGCAAAACAGGTATACCTATGTCATATTTATTTGAATTG
ATTAGAAATATAATATCCCCTTAATGAATCCATAGGTATCTTGCCAACTG
TTTCCACGAATATTATTGCCAAAAAAAAAAAAAGAAACATATTAGTCATA
ACCATCTATAATCAATCAATATCATCCACCAGACGATATCACCTACCAGG
ATTTTCAATCTGCGGACCTAGGCTGGGGCTCGGTTATTATCAGTTAGGGT
TAGGGTTGGTGGCTGGAGCTTGAAAGTCATAATAGTCAGGCGTAGAAACT
TTCGCGAGCTGAAACTTTCGCGATTTTCGCGAATTTTGGCCCTTTTCGCG
AAAGTAAATACACGTCTTTAAAAATTCTAGGAAGGGCCATTCGCCAAAGT
TTATGCTCGCGAAAAATTCTTGACAAAATAGAAAATCTGTAAAACTTCAA
ACTTTGAATAAAATGTAACTTTTATGGCACTTTTTAGCCTGCTAAAAGAC
TAATAAGTCAAAGGACAAATGTTTCAAGCCAACCCAAGAAGTATATGTGT
ATATGTCTCTAAGCCATTTTTTCATGTGAAAATTCTCAATTTTATGTCTT
GATTCGTGAAAGTTTATGCTCGCAAAAAATATTTTTCGTTAAATTCGCGA
AAGTAAATGTCGTGAATTTCGCGATTTTTCGTCCTCGCAAAAGTTTCTCC
TCGAGAAAGTTTGTACGCTTAAAGTAGACCTTTTCGCCTTTCCATCCGCC
ATCTTGAATTGTATGCAAAAATTATGGTGGCTGAATTGCCGTGGTTAAAT
ACCCTTAGAAAGTATGCAAAACGTATGCAAAAAGAAGGTATTAATATAAA
AAAAACTTACATGCATAATTGGCATTATATTAAAGTGTAATCTTGTAGAA
GAAAGATTAAATTTGCTTCTTTTGAAAACTAGAAATTATCAAATTCGCTC
ATCTCTTAGAAGAAGCACTTCAAAAAAACATAACATTAGACATAAACTCA
AGCTGAAAAATCACCCGCAAAGGTACAAATATAATCCTTATTCAGCTGAC
GGTAAATTATTCTCCTGGGAATGGAACCGCCCAAATGGATCAAATCAAAA
CATTGTGACGTCATAATTACTGCTTTCAGATTGCAATTTAATCAGGATAG
AAGATAGGAAATAGAAAATACGGGGGAAATAAGAGAGGATGCATCCTGGT
GGATGATATTGTTTGCCAGCCGTGCTGGTGGGATTTTAGATTCAAGTGTC
CCGCATCTTTTTTTATGCCGTCAGTGATTTGTTATGCAGTTATGGTAAAT
TATGGCTGTTATTCATTAGATTGTCACCTTCCCCGCCTAAAGATGTATTC
ATGGTATTTTCAAAACAATAACTGTGAAAAAAACTATCAGTCAATATTTT
TAAGTTTTTGTAGCGCATTTTATAGCTCTTTTTGGCCTGATTCAAGGTAC
ACTTGAAATCAGTGCTTATAAATAGGAATAATCAGAAAACACCTACCGTC
AAAATAGGCCTCTTACTTATCAGGATGTCATGTTCAATAGTTGAACAATT
CAACCTTAAAGTAATGACACATCAATGCATAATTATCATAGTGTGCACCA
TTTTTTTTCTTATCATTGTTTTGATGCTGTAGTTTTTTGATTATTCAACA
TGACATATCATGATTTGCAAAATGTCTATTGGAGCAGGGGGGGCACCACA
GTGGGCCCAGAGGTGGAAATAGGGAAAAAACGAAAGTTAAAATTTTGCTT
TATTAATATAATTTATGGAATCTTGAATAAATTTCTGATCAGATNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNTTTGAAAACTACAGACACTAACCTTT
CTAAAAATGCTGGAGTTTTGATGTGACACTTAGCGGTTTAAAAGTTCAAA
TTTTGCCTGCATTTTCCAAGCTAAAAAACTCAATTTTCATGATAAATCTC
AAAAGAAAGTCAAAAGTTGAAGTCTACTATGTTCTATCTCATGTAATGTG
ACCCTAGAGCTCTATGAAAGCCTTTATAATACAAAAATTGTAAGAAATAG
TTTTTTGTTGCTCTCCCTCTCCCTATTTCCAAACTTTTGCCATCTGGGCC
CAGTGTGGGCACGCAGTTACTACAAGACAGTATGACACTTACTACCGTGG
TGGTACTGTATTCACAAAAAATTTGTTAAAAAAAATATTTTTGTTATAAA
TGGACGAAAATTTTTTTTTTTCTCAGACCCAACTTTGAAATTATGCTTTC
CCTAATTATCATTAAAATGTTCTCAACAGCTGTTAACCAAGTAAATTAAA
AGAAAATCTAGCACAAAAATGGCTTTAGGTTGAAAAATAATCGCAATTTA
GGGTAATTTCGAGCATGTTTTTGATGATATCACTCAAAAAAAGGGGTGGT
ACCTGGAAATCTTTTCTGAAAACAGTTACTACCAAGGTGTAATAACTGCA
AAGGGTGGTGGTCCTGAAAAAAAAGTGCTGAAAAAGCATTTACATCATGT
CTTGTAGTAACTGCGTGCCCCCCTGATTGGAGTTACTTTCATAAGCAAAC
GGTAACTTTCATAGCCTTCAATAGTTGGCACTAACTTTTGGTCTGTAATT
TAGAAATTACACAATTAGTTTGCTAGATTATGATATAAGTAAGTTATGTT
CTGGCTTTCTGACTTATAGATAAGTCAGGAACCAGAAATATTTGTGATTT
AGAGGCTTTAAAATTTGCTACACAGAGTAACCCCAAATCATGGTATACTA
TAAGTTAAAAAAAGAATAGAATGGTTTAAGAATAACTCAGCTGAATACTA
AAATAAAATTTATGTTTTTCTCTTTTTCTTTCTAGGTAATGTTGGTTACT
GTTATTTTTTGAATCATTTGTGATTGGATTTATTTTTGTGTTATTTTGTG
TAAAGGTCTGAGCTTTAGTTTTAAGCATAGACACATAAGTATGTGGCAAC
AGAATCCAGGTTGGGGCTGGCCACCTAATCAATATAATCAGTATTCTCAA
CAACAAGGTATGTATTTAAAGTTAAACATTGATGATATTGTTTTATTTCA
ATAAAGATCTTTGGATATCAAACTATAAATTGTTTTTCGTTTCTTTCAGG
CAATTCAGCTGAAAATTGGGCCGCTGCAGCAGCACTATGGGCTCAGCAAC
GACAAATGCAAGATCAGTATCCACAAAGTGGAGGAGAGAGACCACCAGAA
CCCCCAGGTCCTCCCCCAGATGCTCCATCCCTACCTAATGATCAAAATGA
GAACAAAGTTGAGGTTCATGATTACAACCATGGAGCAGCAAATGAACAGA
CTCAAGTGTTTGATTACCAACACCAAAATGCACCAGCCGAACCACAACCA
CCTCCAGACTCTAATGTCATTGATTATAATCACGGAAAATCAGAGATGCC
ACCTGTAGATCAATACCAGTATAATAATTGGGACTACAATCAGCAGAACT
GGCAAGATCCAGCAGTTTATCAACAACAGCAACAGCAGTGGGCTGACTGG
AATCAACAGCAACACAATCAACACAATGACAATCATCATAACCATGAACA
AAATGGTGGCAACTTTCATCACCAGCAGGATTATGATCAAAATGACGGAC
GTAGTAGGGACCGTAATCACACTCATCATAATCATGGGTATAGCGACCAA
TCAGGAAATAATACACCGGGTAAGTTGTCAGTTAAAGATAAAACAAAAAA
ATGCGTAGTAGCTTTTTTCTCTTCTAGACAAAAGATTAGCTGGGATTTCT
GTTTTGGTAACAATTCAAAAAATACAATCAAAATGTTAAAAAAATGCCCA
TCAATTTAATAATGAGTGAAAGTCAGGAAATTTTGTAAGGTTGTATTGTA
GTAATCCAAAGACATCTGTCCAGGTTAACCACTTTCAGCTCCATTCCATG
ACCAGGTTTGATATTTCTTTCCAGATCCTGTTGAGATGAAGAAGAAATCT
TTGCCTCTGTGGTTGAGGGATGGTCTTGAGAAATTGGAAAAGAACAAACA
AAAACAAGAGAAGAAAGTCATTCCGAGTGCTAAGAGCATCTCAGGATATC
AACATGGTTCACCAACATCTTCGCCGGAAAAAGAGGAGGTATCCATCAAT
TTGTATCAAACATAAAATTTAAAAAAAACTTTTTCTTTTTAGTCATAAGA
GGATTAATTGGAAATTTTGTCAATTCTCCCATCTTGCCCCGTCCCTAAAC
TTCAGTTCATCTGCAAATAGATAATAGTCGATANTTCTCCCATCTTGCCC
CGTCCCTATACTTCAGTTCATCTGCATGATAATAGTCGATATAAAACTTA
AAAGAGTTGTCTAATCGCCTGATCTCTACACTGAAAGAAGTTTACCATTT
CTAACCCAGAACCATAACATCGCATCAATAATATCTAAGAATCGATACAA
CGAGTTTAATTTTCCACTTGTAGAGTGATGCAGAACTAAGCGACAAAAGT
GATAATGAAGGGACATCGTCCCCAGTGAAACATCCACTATCCCCTCCAGC
TCGTCGTCAAAAACATTCATCATCTGAAGACGAAGAAATTTCTGAAGAGG
AGAAACAGCGCAGAACTGTAAGTTTTCATTCTATATTCAGATGCATTATA
ATTTTGAATGTTTGTTTTTAAAATGCCATTTATCATTTATCAATTTTACC
TATGAATTTGACATATTTTTCGGCAACTCTTATTACTTAGTTCACATCAA
TCTTTTCAGTTCTGTATTTTTGGCATATTTTTTGTTTACTGTATGACCTT
CATGATTGACTTTAATTGCAGATGTTGAAAATAAAAACTTGGATGACAGA
AACCCTCTTAAAGGTTACAAATTCTGAGTTAACGAATGTTTGTGAAGAGG
TTTTCTTTGAGATGAAACGATCAGGTGAGTTTATCAATCAAACCCTCTCT
CCCTCCCTCTCCCTCTCTACATCCCAGATGAGATTTTTTCGTGTGTTGGT
ATTTGTGTAAGTAAAAGGAGAGACGACACAAAGATTTCGAATCTATTTAA
AGTTGTAAATTAATATAAATCAAGAAAGTACATTTCCAAAACCATTTTCT
TATACATTGGTTGTCATTTGTATTTATTAGCAAAGACAGCGATTTACAGA
CCTATCTACTATTTTGATTTTAACTGGAAATTTATTTGCGATTCTCTAAC
AGATTTTTCACGTATTGCACTCCAAGCTACCCTCTGACATATTTTGCTTT
TATTGGACTTATATATTCTTATAGCAAAGAACAAGGCAACCAATGTTCGA
CGTTCTGGAGGTTTGGAGTCTCTCCGTTCGATAGGTAAGTTCCTGTAGTT
TTGTGAGGAAGCAAGAGGAAGGAGGCTTGGAGTAGATATCAGAATGAATA
AAGTGTTTGATTTTCAAACCCGAGTGACGTGCATATACGTTCGAAATCAG
CCAATATACCGACTCCCAGACTTAAAGCTAAAACTCCTGACCAGTTAATG
TTACCGAATCCGTTGTTCAAGTTTTAGAATTCAAAAAAAAAAAATTGATT
CAAAGTTTTTAACCTGGAAAGGTTAAGAATAGTAGCTCCTCAAAAGTGAA
AATCAACACGCATATTTTCTTCAGGTGAAGATGACGTCACGAGTAGTGAA
GAGGAAGAAGAACCAATCAAACCTCCTCCACGAAAATCTCGTTTCGATGA
AAAACCATCTTCGTTACCAAGGAAACCAAAAGCAACAACAGACGAGGAGG
ATACATCTCCCGCCCAAAAACCTACCAAAGCTGAACACGACATTAGGAAA
GATGTACCTGTTGTCATTTCAAAGGACTCTAAAATTAAAGATAAGAGCGA
GAAACGTAACAACGAGGAGAAAACGAGTAAACGCAAAGACGTTGATAAGA
AAAAGAGCCCGCAACATAAGAGTTCCAAAAAGAAAAAGAAGAGGAAATAT
TCGGACAGTGAGTCGGACAGATCGGACGATTCGTATTACAGTTCGGACGA
AGAAAGTGATCATAAGAAAAGTCGTAGTAAGAAATCTTCTAAACGCCACC
GCTCGGACAGTCGTTCGCCCGTGCGTAAAAGTCGAAAGAAATCGAAATAC
GACTCGGATGATAGCGATCATTACGAAGAGAAACGAAGCAAGAAAAAGAA
GAAAAAGGAACGCTATTCATCGGACGAGGAAAGTTATGATAGTGATTATT
CTTCTCAACGTAAGAAAAAATCCAAGGGTAAGAAGCATAAACAAAGAGAC
CGATCTATATCCAGGTAAGCTTGGTATATTTAATAATTACGCATTCATTC
TATTAATTCCCTTCCACAACGGTTTTATCTCAATCATTCAAAAAGTTAGC
TAGATGATACTGTCATACTGTGTTTTATTCACGAAATCTTGACCAAAGGG
ACCATTCACAAAGTACGTACGCTCGAAAATGGCAAATTTTTGACTCCCCC
TCCCCCTTGTAACGCTTTCGTACGCTTTATGTGTACCCCCCCCATTCAGC
GTACGTACGCTTTTTATTTTTAGTACACCCCCCCCCTAACCAAAGTCGAA
ACTTGAAACTCTAGTAACAGTAGAATACATATGTAGGTATCCAATCGTAT
TTATAACAAAGTCTCAAGAAATTAAAAGAATCTAAGGTGAAAAAAAATAC
CAAAGGAGAAATGAAAAATAACAATCGCAAAAACAATTTTTTGATGTGAA
AATATTGCGTTTTTCTCTCAAAAAAGACAGTTTAGGAAAAATTACGAGCG
TACCTACTTCTCCTCAAGGACCCCCCTCCCCCCACGTACGCTTTCGTACG
CTTTTGGGGGCACCCCCTCCCCCTCAAGAGCGTAGGTACTTTTTGAATGG
TCCCAAACCTCTAATTTTGTAAGACTACAATGAATAAGTCGCATAAATCG
TTTTGATTGTATTGAGTTAGATTTCATCTCATCAAGTCAAATTGGAACCC
ATGGCACCTTCTTACGCTTCTTTATGTTCATAAATATGTTAAATTCATTC
ACTTTAGCCTAAAGAGGTTCAGTTCGCGTCTTTGTTCAAGTTTTTTATCT
TTCAAATATGTAGGTCACCGAAGCGCTCGAAGAAGAAAAAGTGACCCATG
TGATAGGTAAGTTAGGCTATTACTTGCAGAGTGCAGTTTGGGTTGAACTG
ACTAGACTTTCTTTAAAAGGTGATCAGGAACCACTGCTAGTGCTCAGGTT
ATCGGATCGTGGCAGCATGGAGGATATATATACAGAGATAAAGATTTATC
CCAAAAACGACATTCTTTGAAACTTTCAAACGGGACATTCAGTGATTATA
GAATATTATGAACATTTTTTAGATTTTTTCTTTAATTTTGTAAAATTTGT
ACAAAGAAGGTGAAAGGAAAGAATATTTTTACCAATTTATATCCATTTGT
GTTTACGTTCTTCTTACAAATATTGAAAAGGAAAATTGACAACTTCCAAT
TCTTCAGAATTCGAACAAGTTTGAAGAAATTGATTTTCGGATATTCTAGA
ATAAAACATCTCTACAAAAACTTTCGATTTTGGATTGTTTATTTCGACAA
CAATTTACAATAAATTATAAAGCAATAGATTAGTATTTAAATATATTAGT
ATCTGTTCATTATAACATTATTTTTGCTTCTGCTGCCTGCTACGGCACGG
AACCAAATCTTGTAGTAGTAGCGATTATTGTGATACACTCTCAGTGTCTT
TGTGTTCTCACTGTTCCCCAGCTCCATATGTTCTAATGACGTCACGGATA
GGTGCTCGGCACATGGGGCAAGTCTGTCCGTTCATTTTCAAATGTAATGC
ACAAGAGTGACATGCGCACATGTGTCCACATTGATAGAAAACTGTATCAA
TTGATTGGTCGATGCAAATAGCACATTGTCCTCTCTGGACAGGTGTTGTG
TGGTTGTTTTGTTGAATGTTCAGGATGGCACTTGACGTTGGACGATCTTG
TTGGTCTAAAACAGAATGCAAATTTGTATTAAGAGTTATGTTACCGAATA
CTTCCAGTAACATCTGTGCAATTCAGCCCGACAGAAAGAATTCAATAATA
TTGGGTTGGTACGATGATGATAATAGTAGTAAGATTAATTTACGTTGGAA
AATTGTTGCGAATTCTGTGTTTAAGGTTCAAAAACCGTAGATAACTTCTT
TCATTGAAGAAACTTACCTGGTTTACTAGCGAGATAGTCGCTCATGAAAG
CCTGAAAGACAGCTGCAACTTCTTGTCTAACAGCGCGTTGAGTATCAAGT
TGTACTTCCATCGTCATTCGAAGAAGTTGTTTCATTTCGTTCAGTTCTTG
TTTAAGCTCTTGAATCTCGTGTGGTGAGCTGGCTCCTCTTTCGTTGATTG
TTCTTAATGACGTTGGGCGTTGAATCGGAGGACGTTGTCTTGGTTGTTGA
GAGCGAACGAATGGGCGTGGCGTTGTGGTGTTTCCACCTAATGACTCCAC
ACGTTGCTGAAATAGGCAAACTTAATTAATAACTAAATTTTCAAACTTGA
TTTTTGTATGTCACGCTTTGATTAACTTGGTTGGTTTTTTAAAAGCAGAA
AAAATGTCTTAGATTAATGTAATTGTAATTTCGAAAGGTTTGGATGTTAA
GATTCTTACCTGAACCATATTCTCCAATTCATCACGGAAATCGTCTTGTA
GCATATTACTGACAACTTGTAGACTTTGTAGACGAGTGATGTCAGTAGCT
ATGCTTTCTGTTAAGATTTGTACACTTGCTTGCACTGTTGATTGAAGTAA
TGCTGGATCAACCAAAGGCGTTGTCGAAGGTGTGGATGTCCCAGGTAATG
GTGGTGGCGGTGGCGGGTTCGATGTTCGGCTGGCGGGAGTAGATTCTTGA
GGTTGTACACTGTAAAATAAATATTAATAATGTCGAATGACATTTAAGTA
TCTTAGCAACAAAACTTTGAAAACAAGAACCAAGGCGATTTTATGCATTT
AGAGAAGTGTATATTAAAATATCTTTCTTGGGAAATTTAACCCAGCGCAT
AGAGAAGTCATCTGTAAGTTAATTAGAGAGTTTTTTTTACCTTGACTGTT
GTCTTTGTTGTCGTTGAGCGATCTGTCTACTGAGTTGGTCTCGGAAAGAT
CCTCGTGCTGGTTCCGTTCGATTATTGTCATACCTTCTTGGGACGGGTCT
TCTAGTCCCTCTTGTATTGCTGTTTGAGCTTCTTGCTGTTGGTGCAGTAG
ACCGTCCACTTAATGTCGCTTCAAGCTGACGTCGAAATCCATTTTGTATC
GCGGAGCTTACTCTGCTAAGTTGTAGAAGGGATTGGACGTCATTTGCGAC
TGTTTCAGGTCTGTTTTGAGCTTCTTCTTCGGCCCTTTCTTGTTGCGTTG
GCNTGTTTCAGGTCTGTTTTGAGCTTCTTCTTCCGCCCTTTCTTGTTGTG
TTGGACCATTGATTGCACGCTCAAAGAAGTTCTCGATACTAGCTCTCGCA
TTACCCCCTGTTACTGGTCGCTCTCCAAGTTGGATTCTTCTAAGTTCTAA
AAATCTTTCACTGTAAAGAAAAAATAGATTTTATGATTGATTCGGAAATT
TTCGAAATATTTATCACGCCTTTTTTCCTTTTCGTTATGATCGAATAAGA
TAATATATAACTAGCGGTCCCAGACCTTTAACTGATTAAAATGATAAATC
ATATTTAGGACCTTCAAATCCGTTGGGAAAGTATCATTTACTCATACTTC
TAATATCTTTCATCGTGGAATAACT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031217XLOC_031217Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049123-exon-scaffold_152-1575043694:109239..109409TCONS_00049123-exon-scaffold_152-1575043694:109239..109409Clytia hemisphaericaexon
TCONS_00049123-exon-scaffold_152-1575043694:104553..104724TCONS_00049123-exon-scaffold_152-1575043694:104553..104724Clytia hemisphaericaexon
TCONS_00049123-exon-scaffold_152-1575043694:103891..104460TCONS_00049123-exon-scaffold_152-1575043694:103891..104460Clytia hemisphaericaexon
TCONS_00049123-exon-scaffold_152-1575043694:103472..103635TCONS_00049123-exon-scaffold_152-1575043694:103472..103635Clytia hemisphaericaexon
TCONS_00049123-exon-scaffold_152-1575043694:102686..103136TCONS_00049123-exon-scaffold_152-1575043694:102686..103136Clytia hemisphaericaexon
TCONS_00049123-exon-scaffold_152-1575043694:102276..102335TCONS_00049123-exon-scaffold_152-1575043694:102276..102335Clytia hemisphaericaexon
TCONS_00049123-exon-scaffold_152-1575043694:101346..101985TCONS_00049123-exon-scaffold_152-1575043694:101346..101985Clytia hemisphaericaexon
TCONS_00049123-exon-scaffold_152-1575043694:97885..100546TCONS_00049123-exon-scaffold_152-1575043694:97885..100546Clytia hemisphaericaexon
TCONS_00049123-exon-scaffold_152-1510915933:109239..109409TCONS_00049123-exon-scaffold_152-1510915933:109239..109409Clytia hemisphaericaexon
TCONS_00049123-exon-scaffold_152-1510915933:104553..104724TCONS_00049123-exon-scaffold_152-1510915933:104553..104724Clytia hemisphaericaexon
TCONS_00049123-exon-scaffold_152-1510915933:103891..104460TCONS_00049123-exon-scaffold_152-1510915933:103891..104460Clytia hemisphaericaexon
TCONS_00049123-exon-scaffold_152-1510915933:103472..103635TCONS_00049123-exon-scaffold_152-1510915933:103472..103635Clytia hemisphaericaexon
TCONS_00049123-exon-scaffold_152-1510915933:102686..103136TCONS_00049123-exon-scaffold_152-1510915933:102686..103136Clytia hemisphaericaexon
TCONS_00049123-exon-scaffold_152-1510915933:102276..102335TCONS_00049123-exon-scaffold_152-1510915933:102276..102335Clytia hemisphaericaexon
TCONS_00049123-exon-scaffold_152-1510915933:101346..101985TCONS_00049123-exon-scaffold_152-1510915933:101346..101985Clytia hemisphaericaexon
TCONS_00049123-exon-scaffold_152-1510915933:97885..100546TCONS_00049123-exon-scaffold_152-1510915933:97885..100546Clytia hemisphaericaexon
TCONS_00049123-exon-scaffold_152-1491911889:109239..109409TCONS_00049123-exon-scaffold_152-1491911889:109239..109409Clytia hemisphaericaexon
TCONS_00049123-exon-scaffold_152-1491911889:104553..104724TCONS_00049123-exon-scaffold_152-1491911889:104553..104724Clytia hemisphaericaexon
TCONS_00049123-exon-scaffold_152-1491911889:103891..104460TCONS_00049123-exon-scaffold_152-1491911889:103891..104460Clytia hemisphaericaexon
TCONS_00049123-exon-scaffold_152-1491911889:103472..103635TCONS_00049123-exon-scaffold_152-1491911889:103472..103635Clytia hemisphaericaexon
TCONS_00049123-exon-scaffold_152-1491911889:102686..103136TCONS_00049123-exon-scaffold_152-1491911889:102686..103136Clytia hemisphaericaexon
TCONS_00049123-exon-scaffold_152-1491911889:102276..102335TCONS_00049123-exon-scaffold_152-1491911889:102276..102335Clytia hemisphaericaexon
TCONS_00049123-exon-scaffold_152-1491911889:101346..101985TCONS_00049123-exon-scaffold_152-1491911889:101346..101985Clytia hemisphaericaexon
TCONS_00049123-exon-scaffold_152-1491911889:97885..100546TCONS_00049123-exon-scaffold_152-1491911889:97885..100546Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_152supercontigscaffold_152:97885..109409 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.46958	7.31869	2.56637	0.834189	28.7589	23.1028	12.5744	13.5011	5.65374	7.92209	3.89118	2.85312	2.3388	1.99639	2.36106	3.36913	7.84029	3.69498	2.79009	3.76281	5.11488	5.65376	6.20594	6.9055	5.77608	6.83708	5.87695	2.5733	6.25423	10.579
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049123 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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