XLOC_031182 (gene) - C. hemisphaerica

Overview
NameXLOC_031182
Unique NameXLOC_031182
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_150:66600..76151-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031182 ID=XLOC_031182|Name=XLOC_031182|organism=Clytia hemisphaerica|type=gene|length=9552bp|location=Sequence derived from alignment at scaffold_150:66600..76151- (Clytia hemisphaerica)
CGCACGTTGAGGAGGATGAACTGCCCAATCCGATGTCTGACGCCACCAAA AATGTCCAAAATGATGAATGAGTTATTTCGGGTTATTTCGTAAAAGAAAG ATTTATTGGCAAGCATTGATTTATAAAAGTGATAATGTACAAACCGATTC CAGACCCACCAGATTTTGATCAGATCAGCCAAGATTTTGCTACTCAAAAT TGGTATAATTTTTTTTGTTTCTGATATTCTTGAGTTTCTCTGTCTGCTGA AGAAGGGTCAAGGGTCATAAAATTTTTAAGTTCAGTCTCTTTACTACAGG TCAATTTTCAAGGGTGTAAAGAATACCAAATAAAAGAGCCCCCCCCCCAG AAGCGGTCTTTGTGATGGCGTGATAGAGACCTTTTTCTTGCATGATTATA CGTGATTTGCCAATCTGGAAAGGAGGAGAAATGTTACGCTGGAGCTGCGG CAACTTAACTGGGAAAAGTTGAAGGCAGCAGATCTCAAACCTCAAATCTA CGCCAGAGTCGCAATTTCCAAACTGGGTGATTTGGAAATTTTTTTTTTTT GATTGCGTGATTTAGAACAGGAGGTCGTGTAGTAGTCGGACACTTTCTAG TCCGATAACGATTTCGTCTGACAACGAGTCAAAAAAACACATATAAAACG AAATATGAGGAGGCACATCTTTTATAAGCAACAGGTGCTTATAAAAATCC AAAGTTCCGACTTTGAGGTTGGGCCCCTCAACTCAACTTCTCTTAAATTT TGGGAAGTTTATTAGGATCAGGCTTTCAAGAGTCAAGAAATTGAATTTAG CTGTTTTTACGATCCTTCTTTTTTCTTGGGGGGGAGGGGGGTGGTCACAA AAGTGACGTTGGAAAAAAAGACTTATAAATTGTAAATTTATTTTATAGAT TCTGACTATTTTACTGTCAGACTAGAAAGTGTCAGACTAGTGACATGCAC CCATCTGAACAGAGGTCAAATCAAAGAGCGTGATCTTGATTTGTAAAGAT TTTCGAGCCGTGATGCGTGATTTGGACTTTTTCAAAGGGATTCCTGATAT CCAAATTTTTTGCTGATTTATGTGATCATGATTGAACTGAAGACAAAAAA ATTGTGTGATATCGTGATCTGACTTAACGCTGAGGGGTGTACCTCATAAA AGAGACCTTCATGTCTGCCCCAATTTTGCCAACGTACACCAACGCAGCTG TAAAACTCGTTACAGTATGCCTAAATTTAGTTTTCATTATGATTGTAAAA GATAGCCAAAACCATGCCATGCAATCACACACCCCGGAATTTGCCCCCCT CTCGGAATAAACCTGCAGAATTGAAAAAGTCCATTCACTTTAAGTGATTT AGGTGGATAATAATATCTTTACTACATCAAACTTTTATTATTAATTTCGC CTAGCGAAAGTATTGTTTCAGCGTGTTTCTGCGGCGGCGGCGGTTAGGAA TTTTTTTCGGGCGTAACGGGAGGAATGAGGGCGTCACATATAGGGCGTCC CAGGATACTTTGCTAAGACAAGGCCCTATCTATACTTTAATCTGGAAATA AGTAATGCTAATTACCTTGGGATTTATGATGAAATGTAACAAGGGTCCAA ATCTATCGCTATTCCCCAAGCTTCTGACCGCTGAAGTACAAATAGATTAT GTGTATGGCCATAGTCATGGCTGAAAATGATCCTGTTTTGTATTCATCAT TGTCAGATTTTTTACAAACATATCACTATGAGAATTCAGTAAAAGATACT AAAACACAATTCATGTGTAAAATTGAACAAGATTGGAGAAATTTTCACAG TGTTATGGCTGAAAATTATCGTTTTTGGACTTTGTCGTAATTTCATCGCG ACTGGCGACCGTTCCTTTTGATTTNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAACCCG ACACAGATATTTTACAAACATATCACTATGAGAATTCAATAAAGGATACT AAAACACAATTTCTGTGTAAATTTGAACAAGATTGGAGAAATCTTCACAG TGTTATGGCTGAAAATAGACCTTTTTTTAAAGAGGCCACCCTGTTGAATA ATTATGTAGTCTATTTCTATTTCTATATATTTATTTGCATAAATTCATTA GAATTACTTTCGCAAATATAGTCCAGCAGAAAAACAATGATAAAACCATG CATAATTATTACAATATGCATGATACAGTAATTATGCATGGCTCTATCAT TGTTTTTTATGGCTGGGCTACATAATTATTCAACAGGACGTCCTCTTTGA AAAAAGGTCTATTATCGTTTTTGGACTTTGTCGTAATTTCATCGCGGCTG GGGACCGTTCCTTTTGATTTTTCAAACCTGACACAGATTTTTTACAAACG TATCACTATGAGAATTCAGTAAAGGATACTAAAACACAATTCATGTGTAA ATTTGAACAAGATTGGAGAAATTTTCACAGTGTTATGGCTGAAAATTATC GTTTTTGACTTTGTCGTAATTTTATCGCGGCTGGCGACCGTTACTTTTGA TTTTTCAAACCCGACACAGATTTTTTACAAACATATCANNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCACTTCATCTA TATATTAATAGCCATAGTCTGTATGTCATTTTGTCTGTTTTTTGTGTCTA ACTTTCGTTTTCGCAAGCAATATGTTTTCGTTCTTTTAAAAGATTACTTA GAGTTATTCTTNTGTCTAACTTTCGTTTTCGCAAGCAATATGTTTTCATT CTTTTAAAAGATTACTTAGAGTTATTCTCTTGAGGTAAGTTTTTTTGATT GATAGATTATAATTTCTGCCTTGTCTGCCTATATGTTTTTCTTTTTTTCT CTCTTTTCTTTTGTTTTATGCTTTCAAATGTAATTAACAACCTTATAGAC CTTTTTCAAAGAGGACGTCCTGTTGAATAATTATGTAGTCCAGCCATAAA ATTACTGTATCATAGCATATTGTAATAATTATGCATGGTTTTATCATTGT TTTTCTGCTGGACTACATAATTATTCCACAGGGTGGCCTCTTTGAAAAAA GGTCTATTTGACTTACATTTGATTTCTTTTCAGCTCTTAACAAACTAACT TCAGGAGGCCTGTTCGAGGTATGGCATGAAAATGTAATGCAAGGCTATAA CACCCAGTATGGATTTCGTGTAACTAACGCCGAAGTTCTTCGGCGTACAA CTGAAACGTTTTTGGCGCATTGGCGTAAGGGTACTTACAAAGACTGTTTG ATTTTCAGTTGGCGTAAAGTAATAATTCCAGCTCGGCGTGAATGACTCCA TAATCCATCGATTTTTAGCTTCCGTTTGGCTAAATTTGCTTTCGCTCGCT TGCGCTCGCGTCAATTTATTAATTATGTTGGTGCATGCGCCTCTTTTCCC ATCTTGCACCCTTATTGAAAAATTGAATGCTGGTACAAAAGAAATTTTGC TTGGCGTGAGGCTTGCTGCACGGAAAAATATCTTTGGCGCGAGATTTCGT GGAATCCATACTGGTATAACACCCAGAGCCCAAATCCCATTTCAATTGAT AATAATAATCTTGATACTGTTCAAGATTTCTTCCTGGGCTCAAATGTCCC AGGCAAATCAGCTTGAATATAAAAAGAATATCACTGGTAAATATTGCCTT TGAGAGACTAAAGCAGAATATCAGCTTATTATCAGACGTGCCGTCCAATA TTTCTGTTTCTGAACATGTAGCTGAATAACTGTCTGGCTGGCTGGTCATT AAAATACAAAATTAAACAAAACAAAAATGGTTGAGTAGAGCTGCGAGCAG AGCTGTATCTTAATGACCAGACAGGTCATTCATTTGAGGGCTATGCCATG TTAGCCTCCACTGTGCACTGATGCAAGTTATACCCGATCTCACGGTACGT GTTGAGCCTGAGGTGTTCAAAGTCAAGTAATCAAAACAGAAGAAATTAAT AAATCAACTTACATTTGCTCTATACATTACTCAAGAAGGCTAGGAGTCAA AAGTTGAAAATTCTTCCTCTGAACTATCATAAAAGTAAAGAAATTTGACC GAGAAAAACGACTTTCGTTTTCTCGCTTCGCTCAGCACTTCTGCTTGAAA CACGTCGTTTAGAAATTTTGTTTACATTTTCTTCCGAGAATTTAAGTTTT ATAGTGTGTGTAAATTACAGACTGAGAAAGTTTTTCAACTGTGTTNCTGC TTGAAACACGTCGTTTAGAAATTTTGTTTACATTTTCTTCCGAGAATTTA AGTTTTATAGTGTGTGTAAATTACAGACTGAGAAAGTTTTTTAATTGTGT TAATAAACTACATAAATAATCAAATTGAATACACTATTTTTTTTATTCTC AAAATATATAATTTAAATTAATTGATAAATATAAAGCAAAACACATTTAA TTTGAGATAAATTAAAAAATTATTCTGAAATTTTGGTCAGTGAAACCTGG ACATCAATTATTTGGCGGGAAAAAGTAGATCTCAAAAAAATTTTTTTTCG CACGTTGAGGAGGATGAACTGCCCAATCCGATGTCTGACGCCACCAAAAA TGTCCAAAATGATGAATGAGTTATTTCGGGTTATTTCGTAAAAGAAAGAT TTATTGGCAAGCATTGATTTATAAAAGTGATAATGTACAAACCGATTCCA GACCCACCAGATTTTGATCAGATCAGCCAAGATTTTGCTACTCAAAATTG GTATAATTTTTTTTGTTTCTTATTCTTGAGTTTCTCTCTGTCTGCTGAAG AAGGGTCAAGGGTCATAAAAATTTTTAAGTTCAGCTCTTTACTAAAGGTC AATTTTCAAGGGTGTAAAGAATAAAAGAGGCCCCCCAGAAGCGGTCTTTG TGATGGCGTGATAGAGACCTTATTTCTTGCATGATTAAACGTGATTTGCC AATCTGCAAAGGAGGGAAATGTTACGCTGGAGCTGCGGCAACTTAACTGG GGAAAGTTGAAGGCAGCAGATCTCAAACCTCAAATCTAAGCCAGAGTCGC AATTTCCAAACTGGGGTGATTTGGAAATTTTTTTTTTGATTGCGTGATTT ATAGAACAGGAGGTCGTGCAGTAGTCCGACNCAGGGATGTAAGACTAACT AGCACTTCCATTTACAACTTGATATTTAGCAAAATTCCGTCTTATATCAA TAAACTTGAAGTCATTTTACTTCTTCATATAAGGAAACAGATATAAAAGC TAAGGCCAAGTAACCTTCGTTTAGAACTTGATATTTAGAACACCCCTGTC TCGCAGCCCCGGTCGAACTTTCTTCCTTAGTGAGGATAAAAATTCCTATT GAAACCCCAATGGGGATAGAAAATGTATTGTTCCAAGGTTAAAAAATCCA CTGGGGATGGGTTTGGAGTGCAATTTTTAAACATGAATTTCGAATGGGTA TGAAATCAAAGTCAATTTCACAGTGGNAATTTCGAATGGGTATGAAATCA AAGTCAATTTCACAGTGGGGCTAAAGTTTCAGGGTATTTTCCCACTGGAG ACGAAATTTTTGCCAAATTTTCCAGTGGGGCTGGGTTTAAAGTTTTTTGA TACAAGACGGAATTTCGCTAAATATCAAGTTGTAAATGAAGGTTCATCAG TCTTACATCCCTGTCTTATGCAATCAAATAGTAAAATGGCTTCAGAATTT ATTGATATAAGACGGAATTTCGCTAAATATCAAGTTGTAAACAGTCTTAC ATCCCTGTCTCTTGCAATCAAATAGTAAAATGGCTTCAGAGTTTATTGAT ATACGACGGAATTTCGCTAAATATCAAGTTGTAAACAGTCTTACATCCCT GTCTCTTGCAATCAAATAGTAAAATGGCTTCAGAGTTTATTGATATACGA CGGAATTTCGCTAAATATCAAGTTGTAAACGAAGGTCTAACTTCTTTGTC TCATTCTATGAAATAGCGCAAAGCTTGGCTGTAACTTGAAAATTTATAGT TTTTTTCAATAAAATATTTTTTGATTCTTTGATAAATCAGAAATCTTACA GGAGAAGTCTTGAATCTTAATCCATTGATTTTCTTATAAGAAAAATCTTT TTAAAATTGTTTAACAATTTTTGATAAACAAATCAATTTTTGCAGATATA CATTACCCCCTGATTTAAGAAAAAGAGAAAAGAGAAAAAGACGGAACGAA ATTCCGTTACTTTGCGCAAAGTATCATAAGCCTGGTGGGATAGGAAGGCT TCAAATCCCACTGCACTAAGGAGATCCAATTCTAGCCCTTCGGGCTTACT TCATTGATCAGTCCCAACTTAGGGCTGTTTTTAAGAGTGAAATGCATGCA GGGATTGGATTTGTTTCAAAATAATCACACAGGTGTGTTTGAAAGTCTTT TGTTTAAGCACTTTTATTAGCGCATGTACCTCATATTTATCGATACCCAG TATTTATAATATCGATACATATTTTCAAGGCGAAATTTTCGACTTTTCAG TCGTCTTGTTATGATTCATTTAGGCAAAGTCAAGCAGACACAAACCAAGA TACTTGCGCAAAACCTAAATCAAGAGGATTTCTAGCACCTTTTAAAAAGC AAAGACAGAGTGAGCAATTTCAACGCCTTCAAAACTACTCAACAGATTTC CAGCAAAGTCAAGATGGTATACCAGGGAGTCAATTTTTCCTAAATTCTAA ACAACCTCAAGAGCAAATTATATCAAAACAAAAACCATTATAATACTGCT GCCACATTTGAAACACCAACCTCCTACCAAGCACCAATGACAAGCTTTGC CAACAATGATGGTGGTTTCAGCGCTCAAAATGCTTGGGATGATTTGCCTC CTGAATCCTTGAGAACTGGATTTGGAAATACTCAAAATAACAAACGAAGA AAATTAGATTTCAATGTCTCAGCTAATCAAAGTTATGGCAATAATAGTAA GTAAGAGATTCAGTCATAGTATTAAATTCCTTTTGGACCCTCTAGTATGG ACAAATTATTGTAGTTTNGATGTCTCCAGCTAATCAAAGTTATGGCAATA ATAGTAAGTAAGAGATACACAGTCATAGTATTAAATTCCTTTTGGACCCT CAAGTATGGACAAATTATTGTAGTTTGTTAGTTTAAATTGCCTTCTTTGG TTTGTACAGCTGTGGGTGTAAAAAGCAGAAAAAGGTTACAATGTAAATCT TACTAGTATTCTGATAGGTAAGAATAGCTTTTAATTTTCAGCTTTTTTTA TTTAGCTTTTCTCAACAAGACTGTACCTCCTGAGACACCTGCTAACCTTC AACTGCAAGGTAATCCTTTTTTATTAATTATCTTTACCAAATGCGACTTT CAGTCTGAGATAATTCATTTTGTTTTGTGAGAACTTACTATAACAACTTT TGTCACTTCTATTTGTAAAAAGCATAGAAGAAATTGCAAGCATGAGCTCT GTGTCTAACTGTATGAATTAGATTGTTTTGGTAGANGTGTGAATGATATT TAGATGATATCATCTATCCCTCATCCACCTTTGTAGGGGAAAGCATAGAA GAAATTGCAAACATGAGCTCTGTGTCTAACTGTATGAATTAGATTGTTTT GGTAGAGGTCAATAGACCTACACATCTATAAATTATTATTATTATAATTA TAATAAATATGATAACAACACATTTCCCATAAAAAAGGAAAATGGAATTT GATTAAAAACTCAAGTACCCTAAGACATGAAAATCACCAAACCACATCTG ACTGTCAAATTACTTGTGGGAACTGAAACAGGTCTTGCGCAATCAATCGT CTCATAGGAAATTATTGACCATGTTAAATCACATTAAAATGAGATGGCGT GAAACAGTGTGTTCATGATATGCACCACTGCAATGACTTCACAAAATTAT GCAATTTTTTTGTTTTTGTACGATACGTCATTTTTTCTATTGTTTAAGTG ACGTATTGGGTGGAAAATGTTAAAAGTTCTCAGAAGACTCTCCAGTGGTT CATATCATGAATAGTAATGTTTTTAAATTTTGAAGAAAATAAGTGAAACA TTCTTTTTTTAGTCGGCAATGATGATGATGGATCTCATAATCTGAAATCA ATACATGAAATCCGTATCTTTTCAACCTTCAATTGAATTTTATATTTCTT AAGAAGTCCCCTTGTTTGATTTTGAATGTGCAAGGTGTTGACAATAGTAA AAAGAAAAATTCAAAATGCAAAAACTAATAATTCTACCTTTTTTAGAGCG CGTAAGGCGCGTCATTTAACAGACTCCCTGGTAATTTGGTTTGTTGTAAC CTTAAAGATTTCTGAAATATCTTGTCCTTTAAGTTATCCCTAGGAGTAAA AGGATTTCTATATTCCTGTATGGTATGGCAATGTAGGGTCCGGCTTAATG GTTGAAATCCTGTATACTCAGATATATCTACTATTTTATTACATTGTTAA ACCATATCTCAAAAGCTTCAGCAGTTTTCATTTTTTCCTTAATTTCTTTA TGTTTAAAGCTGAAAAATACAGGCCAATTTTTCCATTTGCATACTTCAAT GCATTGCAGTCTAAAGTTTTTGATGAGGTAATCAAACATTTATTTTAAAG TGCATGGAGATTTCTCAATGTGTTCTCAAACGTCAGAAGTGCTTTCAGAA CATTATGTTACATTACTCTATTACCAGAAAAAGTAGAGGCTGCTCTATAT GGCTGACTTGGACGTAATTTAAAATATCAGACTAATTTGAAAATCATTCT TAAAGGTTTTTCTCATTTACCTCATTTTCGTTCCATTTTCACTAATTTTA AAGATTATGTTTTATCAACAAATTGTTCTTTAAGGTGATGTATTCAGATA ATCCAATGGTTATTTGTGCACCTACTGGTTCAGGCAAAACTGCCATATTT GAGATGAGCATTATACGATTGCTTCTCAGTACTACAAATTTCACCTACAA AATAGTATACTGTAAGTTGGTTTTTCTTGTATTGGTAAGAGTCTTATTAA TATAACATATAAGTTTACTTTGTTCGGAGTTGTTGAATTCACTTTTTTTA TGTAATAAAACTATATACGATGATAAAAACATTTTTAGGGTTAAAAACCC AAATAATTGAGAATATCTAAAGACATCGTATATAGTTTGTTTTTTTAAAT GAATTTTTGATGTTCTTATTAAAAACACAACGGGTATGCTACCTAGACAT CTAGTAATTAATCAATATTTTTTAGTGGCACCAATCAAAGCATTATGTAG TG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049074TCONS_00049074Clytia hemisphaericatranscript
TCONS_00049073TCONS_00049073Clytia hemisphaericatranscript
TCONS_00049072TCONS_00049072Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00049072-proteinTCONS_00049072-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_150supercontigscaffold_150:66600..76151 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.39 2.42 2.07 1.93 1.32 0.71 5.52 6.77 3.87 4.12 7.99 4.81 0.14 0.2 0.18 0.4 0.04 0.26 0.59 0 0.18 0.37 0.11 0.94 2.97 2.59 0.21 0.22 0.16 0.32