XLOC_031063 (gene) - C. hemisphaerica

Overview
NameXLOC_031063
Unique NameXLOC_031063
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_148:20080..24463+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031063 ID=XLOC_031063|Name=XLOC_031063|organism=Clytia hemisphaerica|type=gene|length=4384bp|location=Sequence derived from alignment at scaffold_148:20080..24463+ (Clytia hemisphaerica)
AATAGCGCTACATCACTAGTATTGTGTAAGCGAAAGTAAGCGCTCTCGAT
TCAgttaccactttcaaaaaaactcagatcaaaatattttgcttggctgg
gatcgAGCTGTCTTAAGGGTCTATATATATATAAAGCTCAGCGAATACAG
ACCATAAATTTATAACGCTTTGGCGTTGAAAGTCTTGAAGGAAAATTAAA
GCGAATAGTTACCATTTTTGATGGTCCAATCAAATTATTTGAGTTGTTTC
TGCAAGATCAACAAGCAGCCTCATATATGTATATAGATTAGCCTTTAGAA
AAGCGAGACATTTGGCGTTGCGGTGCTCCTATTCTAGGTCAGGACCTACC
GGTACAGGACCGAAAAATATCGAGCTACCTCGTATATGCCAGTAGCACTT
AATTGGTTTTTACCAACTTTTACACGAAATTATTTATCCTGTTTTTAGTG
AGCAAAATACCCAGATTCCAAGCAGAAGGTACCATAGCAAGCACAGCATC
TCCTTGTAAGTTTTCATCTTCCATTTTTCTAAATGAATTTAAACTGATGA
ACTAAAAGTCTAAACTACTTGTATTTGGGCACTACTAACCAAAAAGAATA
GTTATTGTCAAGAATTACAATTACCATTTCTACTTCTCCCAACCAAAACT
AGGAATCAGAAAACGAATGGATAGGAGTGAAAGTTCGAGTTGGTTGTAAA
GCCGATACATACCTTAATCACAATTTCTAGTGGATTGAGTTTGTTAATCT
GTCCAACGACCAAACCTTAGTTTGGGCCCTTTAGACACAGAATTTCAAGC
CTTGTTGTGGACCTAATTGCTTTACGCCGTTTCGACACTAGTTCAACCCC
ATGCTGAGTCTCAAATTCCCGTTTTTATGGCGAATTTTTCGTCCAATTTT
GGCATAGaccttttgtaaaaaaaaatgtaaacgtTTGCATTTTTATACCT
TTAAAAAGTCACATGCTCGACCATCCCCGTTTGTTACTTTTTGATGCTAA
TAAGAGTTTGACCATATGAAAAATGGCTTTGTCAGCAATCAAAATTGTTA
ATTTAAGAATTACGctaagggaattaattttcgcgtgaagtaattttcct
aattttgtagatttttggcaaaaccgcgaaaatttgaacccgcgaaatac
aaatattttgccaattttatcgaaaaatcccaaggaaaatgaaagaaatt
tgtccaaaaaaggccAAAACGGCGAACATTTATTCCcgtgaaatgcaatt
tttcaatttttatattcAGCTTCCCGGAAATTACAAATCAGTCAACAAAA
GCAGTTCAAAAAGTAAGTTGATACCGTTTACTCTCCACTAAAGATATTTA
TcagttgaaatttgagaatatttttaaactCGTTGTTATTGTTAGAGTTT
CAAATGTGGGACACACAATTCTTTATCAATCCCTGCGGGTGCGCCACAAG
AAAGAAGTTCATTATATActattttaaaactttaagtTACTTTCGAATTA
ATTGCGCTATCTTGGTTCTCTATTCTATAGAATGGACTCTATTGACGTgt
acttaaaaaagaaaaaaaatcgtatGAAATATCAAATGAATTATCATACA
AAACTCAAGGTGATTGTTCTTTTTAaactgaaattattttgattgtaTCA
ATTTGTATACCATACAAATGCTCGCTTATTTTTGAGTGCGGATTAACTGT
CATTTGAACAAAATCTGAGGTCTGTTCTAAGAGTACCCAAAGCATGAGAG
GCAGTCATCGTTAGGTAAGACGGCCTCTCGCAAATCAGAAAAGTAGGACG
AAAACTACCCAAGCATTTTTAAAGGGTATTCAACTATTTCCCTTTTGCTG
TTATTTGATTAAATTGTTAATTGATCGTTAAAAGATTCAGTGGTAATAAT
TTTGCCCTTTAATCTCAAATTTACGCTATTTTTATATTGTGTTTTTCATA
ATCatatgattttattttcaaaaaagcctCCAAAAGTTATCATTAATTCA
GCCTGGTCAGAACCCCTTGTACAAAGATTGAACCTTAGGGATTTCTAATA
ATTTACGTTATAATAACCTTTCGAGTCAATACAAATATTCAAAGTTGTTT
CTGTACTGCATTTTGaggtataagaaaaaattatttttatacctTATTTA
TGCTcattgggtcaagggctatcgtttgtCATTAGATTACTTGGATTACT
TTACGTATATGAATGAGATAGTGGAAAAATTGGCTAATGTAAGTCCTCGA
GCCTTTAGCAGCCTTATGCTTTTAAATAATTTGACCTATTAAAAAAGGTA
TAGGTTTTACCTAAAAGGCCAGTACGCTAAACATTAGAACCTGAGGTCAA
AAATGAAACGAATAGAGTTTTTGCCTCTGAAGCcgttttttgacaaatat
tgtcaTGAATCAATTTCTAGAGAGTATTTAAACCAGGGAAGGAATTAAAT
CAAAgctgaaaatgtttttcctttttgttacaCAGAAACAAGCTGAAGAT
AATCTGAAGCGAATGAAGTTGTCACACAACACACCAAAGGCGGATACAGC
TAATATTACTGCACGGGTATAAATGCACCTTCATCATCATTTTAGTCCAA
GCGCTTCTCTTCGGTCAAAGGAGAGAAATTGGATGTAATAGAAAACCAAC
TGAGCTCTGGTTACGGAAAGTGTTTTAGCCTTGATTAGTTCGTTGAAAAG
TTCAAGAAAAGACGACTCGTCCTAAAAATTGACTGGCTCCTATATGTATA
TGCTATGATCATAAAAGTAGATTTACGTTTTTCGTTTTTGGCAAATTGCT
CTCTAAACTTTCGGTGTGAAGTGACTTTATATCAATAATGTTAAGttgtt
tcaataaaatttgGTAGAGCTTTGAGAAAAGcagattaaatttcttattt
tcttgcATTCAGGGTTTCATCTAATGATCGGTTATATCATTAGAATTGCT
AGGAAATTCTTAGCAAAAAAATATAGGTATCTTTTTGTCTGAGCTAGGTG
TTCTCAGAATATAAGCCCCTAAAATTTAGGTATAGATaattaaactgaaa
ataaaagaatttcgtCATATCACGCTAGCtatgcagatttttttgaagaa
atccattaaccaaaacattaattttaaattctgtttcttttccaaagaaa
tcaaaaggCAGCACACCAGTGGCAACCAAAACTACCAAACGTGCATCGAC
AGCTTCTTTCAAAGTAGACAAAGAAGTGACCTTCAATTTCACATCAAAGC
TGAAATCACCCAAACCTGTACTTAAAGAGTCTAATCTTAACAAGAGTGCA
ATCTCCTCCTCCTACATCAAACCCACAAGAAAATCCTTCAAAAATGTCTC
CATTCTCGACACCAAGTAAgactttttgttaattgtgaATTGTTTGCGAN
CTCCTACATCAAACCCACAAGAAAATCCTTCAAAAATGTCTCCATTCTCG
ACACCAAGTAAgactttttgttaattgtgaATTGTTTGCGAAGGTATTTG
CGAGGTATTCTATAACTTGTCTTCCTTGTATGTTAAAGTTTTGTTGGCCC
ATTTACGCCTTCTCACTTTCATCTCTTAGATCACCTAATGTAAAAACAAC
TTGCTCGTCGTCTGCAACGAAGAAAACACCTGCGAAGTTTGATCTTCAAG
CTTCTTTGAAGAAGAGGCTGTCTTACAAGCCGCACTCTGGAAAACTGAAG
GGTTCTTACTTTGCTGATAAGTCGTCAGCAGGAGCTAACACCACTTTCAA
CGCCAATTCTACTTTTACGCTTTCCCCAAGGAAAGATGTCAAGCAATTGA
GTAAACCAAAAGCCAAAGCCAAGaggtaatattttttttttctcttttac
agTGTCCAAAGATCTATACCGATATTGAGGTACCTTCCCCTCGTGTACAT
TATtgtatatttaaattttaaattattcattttttgttCTCTTTGCAGGG
AGAATCGACGTAACGAAGCTNGTACCTTCCCCTCGTGTACATTATtgtat
atttaaattttaaattattcattttttgttCTCTTTGCAGGGAGAATCGA
CGTAACGAAGCTACTAAACGACGTGACAACAAGAGAGCAGATGCACTTTC
AAAACGTCGTGGAATTCAAACttaagaaaatcattttatCCGTTTTTGAC
CCAGTGTACATACACCCATATGTTTTAAGTAGTAGCATGTTTTATCATTT
AACTGTATATAGTATCTTTATCTAACAACACTACCTCTTTGGAAAATGGG
TATTACTGCAAAttcttttgtaaattatttagTCACCATTATTTTTGACC
AAAGAAATAATCAATATAGACTTTATACGTTTCAATGAATCTATCGAGTC
CTGCTTTCTTTTATAAACGTTTCTTTCAAGCGTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048876TCONS_00048876Clytia hemisphaericatranscript
TCONS_00048877TCONS_00048877Clytia hemisphaericatranscript
TCONS_00048878TCONS_00048878Clytia hemisphaericatranscript
TCONS_00048879TCONS_00048879Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00048877-proteinTCONS_00048877-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_148supercontigscaffold_148:20080..24463 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
39.57	37.17	14.46	9.96	331.07	245.54	137.33	133.86	88.72	91.73	87.5	74.95	53.26	51.74	68.35	77.47	123.5	113.67	31.95	34.79	63.25	56.96	66.71	56.92	186.47	174.13	30.45	22.88	40.01	44.03