XLOC_030924 (gene) - C. hemisphaerica

Overview
NameXLOC_030924
Unique NameXLOC_030924
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_145:86797..95384-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030924 ID=XLOC_030924|Name=XLOC_030924|organism=Clytia hemisphaerica|type=gene|length=8588bp|location=Sequence derived from alignment at scaffold_145:86797..95384- (Clytia hemisphaerica)
AGAATTCAAAGGGAACAAAAGAAAAACTATAAAACAATTATGCAGCTACT GGAATTGATCGCGATTTTATGCATCTTAACATGTATATGGGGCCAACCTT GCGACGTCGTTCGCTGGACCGGCTGCAAAGGGCCAAAGCCGAAACCAAGT AAGACTCTTACATTCAAATACGTTAACGTAAATTCTTATCAACAAAATTT TATCTTCATAATCTTCAGTCGAAACAAAATGAAAACATTCTATTGGCCCT TTTTTGTGACCTATGTAATCTTGTACACAGGGGAACTTGTACTAACTACT ATTTGATTTTACTGATGGACGTGATACAATCTTTCCTGAGCGTTATCGGC AAAAGACAAAATAAGGGACGGTATGGAGTTTTTAAAAGCTCTTATTTGAT TTGGTTGGTCGTAAACAATTTTGTTACTTTTTCTAAAGAACACGTCATTT TTATTACTTCAAATGACCAATTATTAAAGTATCTCCATCTCATCTGCAAA ATGAGGGGCTAGCAACCTTTATCATTTTTTTCTGCTCTTCATTTACAGAC ACGAACACAGCTAATGTACTTCACAGCAAACTGAAAGGACTGGGGATGAT GCCTTCACAAGTTCGAGATCACGCACAAGACTACGACGATGAAGAAGAAG AGGACGAAGACGCGGAGAGAAAAACTAACCAAAAGAAGATTCTAAGGATT TTCAATGATATTATCTCTTCGAGGTTATCAAAGGAATTGAAAGAAAGGTC TGATGATCTAGAAGATTTAGATGTAGCAGCAAAAAGACAGGAAGAGGACG AAAAGAAGAACGAGGCTCATGAAGGTGACAATTTATTCAACAATGTGGAT TATGACAATGCAGTTCTCGAAGAAAACACAGGGACTAAAGAAACGAATTC AATACAAAATGATGACTCAGCAATCTCTATTGATTTCAATGAAGTTGAAC AGATCTTGAAGTCACTTGAAATTACGTTATTACGGAAGAGGAATGTATTA GAGGAAGAACGTAAATCTTTATTGGAAAAGNAAATTACGTTATTACAGAA GAGGAAAGTATTAGAGGAAGAACGTAGATCTTTATTGGAAAAAGAAAATG AAGAAAAACAATCTTATGATGACGTAATGAACATTATCAATACACCAATG GGTAACTTGAAACGCTTAAGGGATGATTTGATACAACTTCAAGAACTTTT AACAAGAAAACCCAAAAGAAATACGAAATGAAGAATTAATTTCAACCCCG TCCCCGTGTGTTCCAGGCTTTATTTACGTCACTGAAGGACGATACAAGTA AGCATCATACTACGCAGGGAGCGAGGTTGTGAAAAACTTCAACTTCCCAA AAAAGAATTCTACAAAGGGTATTAGTGATCAAACTTCAATAGCTGGACTA TTACGGTAATCTTTGTGATATTATGAAGCACGTACTTTATGTATATGTAT GTATTTCCAATATGCGCAGAAATACTGCTGGACGGAGTAAGTAAATTTGA AAGTGATAAAAATGTAAATTTTTAAGGGAGGGTTAAGTCGGTGTTTTTTA CACTTTTGGCGAAAACGTGAAGTTTTTTAAAACACGTTTTAAAAATAAAT ACAAAGTGCACCTTTTCTTAATATGATATCAGGGGATCGGCAAAGGATTG AAGATTCCATTCCTTTTTTCCCGAGCCTTCTAGAGAAACTAAGCTAGTAC TTATAACCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATGGAATCCTTCA TTGAAAGAAGCATACTTTGCCTTATCCAAAATGAGCGTATTAGTCTGGAA TGAAATATCCTACAAGGCTCTAAACTGATTTTTTACGTTATATGTGATAT GTCGTTACGTCTATGCCTTAAAATAAGCTCAGATAGAGCCTCAAAGGATT AATAATTCCATTTTCCGAAAAGTTGGGGCTGGGGTTGGGTGCACCACTTC AATCGCTTTAAATTGGAGTTTTTAATCCTAAAACGCTCGTGAAACCGCAC TTTTTGGTATCTGAGAGTGTTTTAGCGTAAAGTGCAATTGACTTTTGATT GATTTTAGATTGTAATCAGCCCATTTTAAAGATGAAATGTATCTTTTATA ATTGTCCAAGTTCAGAGATGTTTTCCGGATGGAATTTCGGATCCAAAAGT GCTCTTCATCATTGTTTCATAAAATATGGAGATCGTGTGACATGTTGAGA CCATCAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCACGTAACT CTCATAATTCCAAAGTTCATAAAATCTAATATTTTGGAATATTGAATCCT TCTTCGCTCCTGGGACCAAAACCAAAGCTCTAAGCTCGTATGCTCCACCT TTTTGGAAGATTTCACCCCAAAATCCTTGTTGAAACTTATATTATTCAAG AAAAACCGTTTTTTAGAAAATTTAATGTCACGTTTTCGCCAAAAGTGTAA AAAACACCGACTTAAGAATTTTACGAAAATGACGTTATTCTCTTTAGGAC AAAATTTATATAATTTGAAAATTTTGTATTTTTAATAACTATTTATGATG TAACAACACGGAAATAAAATTTCATTTTTTTTCATTTTTTCGTTTATATG AATAATACATAGTTTGTCGAAGGACTTTGTCGACGGTAGGGAGAACCCTG TCCCCTCAACTCTCTCTAATCCGAATCTCTATTATTCGAATCTTTCTGTA ATTCGAACTAAAATATCGATCCCCGCAGCTGGAAAGTGGTATGAATTACT ATCTGTAATTCAAATCTTTCTCTAATTCGAACAAAATTTTGGTCGCCCTT GAAGATCGAATTAGAGAGAGTCAACTGTATCTGACGATTGCAATTTCTTT TATTAATGCGGTCTACGCTAGAGATCCTTAATCTTCTGAAAATTGGAAGA CCGGAAACGAGTCCGTTCCTGTTGCTTTTAATTGTTTTCGATCTGTTGAA TAACTTTGTTCATTTCATCTATGTCTAAACCAATTTTTGCGTATTTCAGC CATTTCATCAGAAACTTATTTTGTGATCTTGCAATCATGAGAGAATTTGT GTCTTTGACTAATTAAAGTTTCTACTGAATCTTAGGGGTGAAAATTACAT TTTAAGAAGATTGAAGTTCATGCTTGACCATGGAAATTAGAAAACAACTA CAATGAAATCCCATCACTAAAAAATCATTTTTACTGTCTTCACCAATCAT GACAAAGGAAGGAGAAGAAGGGAGTTCATGTCATTCATGACGTAATGTTT TCTACGGAAAGACCCCAGTTTTTGTCAGTAGTGGCAAATTTTATACAAGT TTTGTCTACTTTAAATTTGCCACTACTGGCAAAAACCGGGGTCTTTCCGT AGAAAACATTACGTCATGAATAACATGAATACCTTTCGAGAGTTTGTATC TTAATATATAATGAATTTTAACGTCTTTCATTCGAGTAGTACCTCTGAAT ACAAATGGCATCATATAACGCAATTAAATCATAACAGATCATCCATTCTG CCATACCACGCTTATGCTCTAAAGGTATGTACAATCAGTGTCATAATATA TTGGCTCTTTTGGCTAATTTACAATTTTTTGAAAATTGAAGTTCGAGCGA GAATGTCAATTTTTAGGCCTTCAACTTGATTTCATTGAGTATTTCGATCT GAGAGGGATTTATTGGTTTCTAGACTATATTTCAAGCCCTACTGGACCAT TTTTGAACTTTTGGATCCTCAAATCCTAAGGTCCTACAGTTAAAACTCTA CCCTTCGAACCTACTTTAGAGCACTTACAAATCGATTGTGGTTTCAAAAC ACCCCGGTGAATTTCCCTTTTGTGCTAAGTATTTTGTCCCTGATTGTAGC AAATGTGAAAATCTGACCTGGTCTTTCAGCCAAAATAACGAAAACTGCGT TGCGTTTTGCTTTAAAACGAGAGCAAAAGCAATTTAACATTCAAAATCTG GATGAAAAAGATCAAATCAGATTCTGGGCAGATTCTCTTACAGAGTCATG GCTTCTACAGTGCGCAGAGTAATCAGAATCTGCTCGGAGATTATGTGAAA AGTAAAATTGATTTCTTAGTTCAAATTAGCTACTTTATACATATGACAAA GGTTTCGCCGATTTATTGCTGCTGTAAAGGGTGCGATTTTAAAAGCTAAT TTTGGTAAACCCACTACCCCCCGGGTCAAAGTTTCTGAACAGACCCTGAT ATAAGATTCTAGCTCACTTATATGCTTGTAACAGTACCTTGAAGTGTAAA TAGGGATCAAGGAGAGAGCCACTCTATTTGAACAACAAAAAAACACAACT GACCTTGTAATGACAATTTCAATCAATGGATGTGACATCCAAAAACCACA GAGTGATACCAGAACTTCATTTGTTTTTATCCCTTTTTTTTCGTGTGTTA TACTGGAAAATAAAAATGGATAAAGTACAGTGTGTCTCGAAAAAAGCGGA CACATTTTGGTATAAAGTAAAATCCTCATAATTTATGCGAAATTTCATGA CATGTATCAGTTTTTATACTTAATATTTTAATCTCAAAAACCTGTTCAAT CATGTTGGCTTGGGAATAGAATATTTATTGATTGAACAGAGAATTTTAAC CCTTTAAGTGCCGATGTCGTATATATACGACATGGGCTATATAGGAGGGC GAAGCCCTCCTGTAATGCCCAGTTTGAGTTAGAAATCGTTATTTTTGGTC GACCTCGTAGGAATTAGATTGTCCTTTATGGTCAAGCAAAAAAAAATTCA AAAGTGAGTCTTTCCAGCGAAATTTTAAGCAAAAAAGTCAAAAAAATGCA AAAAATTGACAAAAATTCACTTTTTTGAGATTCTGACCGTTTTTTGACTA TTTTTGGTCAACGAGTGATCCAAGAACCTCCAAATTTGGCCCTGTTTTAC TTTATTCTGTCTTCTAGTGAATTGATTTGAAATTTTACCACTGGGCACCT TTTCATCAGTTCAGTCAGGTCCGCGCAGCGGGCCTGACTGCTTTAATTCC CTAGAAGACAGAATAAAGTAAAACAGGGCCAAATTTGGAGGTTCTTGGAT CACTCGTTGACCAAAAATAGTCAAAAAACGGTCAGAATCTCAAAAAAGTG AATTTTTGTCAATTTTTTGCATTTTTTTGACTTTTTTGCTTAAAATTTCG CTGGAAAGACTCACTTTTGAATTTTTTTTTGCTTGACCATAAAGGACAAT CTAATTCCTACGAGTTCGCCCAAAAATAACGATTTCTAACTCAAACTGGG CATTACAGGAGAGCTTCGCCCTCCTATATAGCCCATGTCGTATATATACG ACATGGGCTATGTAGGAGGGCGAAGCCCTCCTGTAATGCCCAGTTTGAGT TAGAAATCGTTATTTTTGGTCGACCTCGTAGGAATTAGATTGTCCTTTAT GGTCAAGCAAAAAAAAATTCAAAAGTGAGTCTTTCCAGCGAAATTTTAAG CAAAAAAGTCAAAAAAATGCAAAAAATTGACAAAAATTCACTTTTTTGAG ATTCTGACCGTTTTTTGACTATTTTTGGTCAACGAGTGATCCAAGAACCT CCAAATTTGGCCCTGTTTTACTTTATTCTGTCTTCTAGTGAATTGATTTG AAATTTTACCACTGGGCACCTTTTCATCAGTTCAGTCAGGTCCGCGCAGC GGGCCTGACTGCTTTAATTCCCTAACCTACCCCCCCCCCTTGGCCGCCGC CCACCACGCCCTTCCTAAATCGGGCGGCGCCGAAGGCGCCCAAAAGAAAG TTGATATACGAAGTGGTTTAACGAGCTATATACGAGCTTCTAATTCCTTC TAGATCAGGAGATATAAGCCCTTAAAGTTTGAACTAGCGATTTTTTAAAA AAAACTTAGAAAAAAGGACCCTGGCACTCAAAGGGTTAATCTTATTTCAA TTATTCTTAGCTCAGTTAAGATGATGAGTTTTGAGGATTTTTTACTTTAC ATAAAAATTTGTCCGCTTTTTTTGGGACACACTGTATAATATTAAAGAAG AAGAACACAACATAGAAGGGGAAGGACAAAGTTCAGTTTCAACCCCTACA CGCTACTTAAATCGCTCCTATTCACAATACTTAAATTTTTTCACATTATT TTTGATTAGCCCCTATTTCGACTTGGCTTTTTCCCAGTGATAAAAAATGG TGTCCCTTTATGTTGGTCAAAGCCTTCCTTATATTATTTCACAAGAGTAC CAGGATTGAAATTTTATTCATTTCGAAGTTTTATGCCTAAAAAACGTTTA TTATAGGTATGATAATTTGTAATTATAAATAGTAAAAATATGTACATCGG AAAATATCTTAATATAAATTTCGTTTTTGGCTAAAATTGTATCTCAAAGA GAGGATAAGGATTTTCCCTTCTAAGATATGAGGCTTTTTTTAAAAGCTTA AAAAATAACTCAAAATGTTTATCGTAAGAAACGCAAATAAAAATCTGATA CTATATATAGGTAGTTGTATGAAATTCGGTCGTCGAATTTTTAATTCTTC GAAGCAGCCATTCGTCTTGCTTCCTCAAGCGTCAACTGCAAACTAAAAAA GTGAAACTTGTTTAAATTGATGAAAATATATTCATCATTATTGTACTAGC TAAATTTTTTAGTATGCCACTTGCCCATGACTTTGTTCACCAAATTCAGA TAAACAGCTCCGTCTGATGTCAGTATTTGTTGTGTCCGAGAATGGAAAGA TTTTACTGTTTTTTAAAAGGATAATCAGAAGGGTTGAGATATTTGGCATG TGGGTTCCTTCTATATTGCATTTAAAGTTTTTATAAGCAACTAAAGTTCA TTCGCTTCAGGGCTGGAGTTGCTAAGGATTTTCAGCCAAAAGGTTGCTTA TGGATTTTGAGCCAATAATTTCTAGCAATTTCAAAAAATTAATGTCCAAA ATACGTCAAATTAGGTATTTCGAATTTTCGGCCGAAAATGCTTCTTCTTT AGTAATTTTTGGTTGCGTTCCCCGCTCATGGCCAGTTTCAGGGCTAGGTT GCTAAGTCAAAGTTAATTTTATGGCCATTTTCAGGGCTGGACCCTTAGCA ACTCGGTTGCTTATATAAAAAGAATTGTGTAGTCCTGAACAAAATATTTT GTCTAACTATTTTCCGAGGTCGAGATATTTAAGTTACAAGTTTTCTTTTC TTTCTTACTTTTTTTAACGAAAGAACCGTGTGGACTTTGGAAAATAGTTA GACTTTAGAGAATATTCGGAGGTTTTACTCAGCATCGAATAAAGGTTACT GCAGGCCAAATACATCAAACCATCTGATTTGATTATCACTTTAAATTTAA AGTTGACACAAACTTACGTTCGAATTTCTGCTTGATATTTTGCTTCCTGT TGTTCGATGGTTCGTGCTCTGATTTCTTGAACGGTGTACTGAAATGAGTA AAAAAGAAAAGCATATCAAAATGAATTAAAGGTTAATTTTTCCCGACAAA ATAACAATGAGAATAAGAACATAGTTGAATCTCTCTCTAATTCGATCTTC AAGGGGCTGTGACTTTTCTTAGAGAGAGAAAATTCGAATTATAGGGAGCA TCTTAGAGTACTTTCTAGCTAAGTGTTTCCGTTCGAATAATAGAGAAGAC TGTATAAAAATTCTCCCTGGCAAAATTTTTAAACAAGATCGAGTTATAAG CAATCTCCTTTATTTCAAATCTCTATCTCATCTGCAAAATAAGGGGCTGG CGTTCTAGAAAGTGAACCTTTATCATTTTTTTCTGCTCTTTATTTACAGA CACGAACACAGCTAATGTACTTCACAGCAAACTGAAAGGACTGGGGATGA TGCCTTCACAAGTTCGAGATCACGCACAAGACTACGATGAAGAAGAAGAT AATCAAGACGCTGAGAGAAAAACTAACCAAAAGAAGATTCTAAGGATTTT CAATGATATTATCCCTTCGAGGTTATCAAAGGAATTGAAAGAAAGGTCTG ATGATCTAGAAGATTTAGATGTAGCAGCAAAAAGACAGGAAGAGGACGAA AAAAAGAACGAGGCTCATCATGATGGTGATGACAATTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048666TCONS_00048666Clytia hemisphaericatranscript
TCONS_00048665TCONS_00048665Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00048666-proteinTCONS_00048666-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_145supercontigscaffold_145:86797..95384 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.16 0 0.04 0 0.14 0 0.27 0.08 0.77 1.98 0.63 3.16 5.96 2.67 0.17 0.12 1.94 1.75 13.14 16.61 2.28 3.08 0.71 1.29 0.34 0.4 0.05 0.06 0 0