XLOC_030854 (gene) - C. hemisphaerica

Overview
NameXLOC_030854
Unique NameXLOC_030854
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_143:403428..414780+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030854 ID=XLOC_030854|Name=XLOC_030854|organism=Clytia hemisphaerica|type=gene|length=11353bp|location=Sequence derived from alignment at scaffold_143:403428..414780+ (Clytia hemisphaerica)
acaaccccgaccgaaagtgactgttcCACCCCTagagattcattcctctt
tgattgtcacgggaattaactgctTGTGGTTGAAAAGAAcggcaaattac
gcatgcgtattagtgtctatttgggtgagctggaaacattacatGAACTA
ACTCTAAGTAGTGATTGTTGGCAATTTTCCCTTTTGTGACCAATGACTGA
ATGACGAACTGACGAATGTCTGTTAATGACTGTTGAAACCTCTGCTGAAT
GTTGACTGTCGTCAATTATATTTCCAAAGAATCCGATTAACCTTCACCTC
CAGCTCAAGCTTGCTACGTAAGTGTGAGATTTATTccattttatcaaaac
aaacactGAAACAGTATAGGGCGGGTAagtaacttttttggggggtatct
tcagatcttcttcgcctggtgttttttctgttccatatagtgatagaaga
catttaaaaacttttttttcaattttatgcatttttgacgaattccagcc
caaaaaactgcccgggggagcttttttgaggtttattcttcatatctctt
ccaaaacttgctcaaactcaagatttagtgtttttttatgaaaatttaac
ctactGTAATGTgatgcattctgcgcaatttttaaggtcataagtccaaa
attggccgaatcCCCCTGGgggtaccgtgagaggtcctaaagccgacagc
ccagcctaattccgaccccccNtgggcctatttgtggtcaaaaaggtgtt
taattttgcataaattaatgcagattgtggggaaattccctgttttccat
cagttttttaccacaaataggcccataaattttgatctagagaagttggg
actttggtgtaatacacttttttgctcagtttgaagagctctatcatgtg
gtatagatttttttttaatttgaagaacccccaaaaatcatgaatttcca
ggccttgcaattttgcctgaaaacgcaaaaaatcgccaattactcgttac
ttgcacgataatatcgtggaaactttttgattttgtaatctacacatact
aattcgcgagtttccgttgttNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNt
gtggcgtttttttgcaaacttcaaaaaactgatttttgtcccgcctttgc
gggactttggcttaagtgcttgagtgcagcatagggtataaagtccaaat
atgtgtttcccgtaatttttgtatgaagagttaggtctatactgtccctc
tccaagttgaacaataaactaattgctagaactctcgaaacaaaacatct
aacaagatagctgtaatgtcaagatgtcaattaatgtaattaaaaaaagt
gcgagttgtaaaaataattaccttttattctggatcagttgctcatgttt
aaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNCCGATCTTATCCATTGATGAtctgcggcactatcgtaaag
ctagaatcgcttcgcgtacttttcgcttgagaaaatgattgacagattga
agtttttcatacCCGCGGTGCGCGCTGCGCGGGAGCNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNattgatgtttgtaagtg
cactttatagttttgattcccattgaagaatcatattctggttttcatgt
tattagatgctgttttagagctttaggtctacactgtttgggtagcaaaa
aatgctgtttaaggccaattttgcaagttcataaactttaaactaattga
ttcacacgtctgaaattttcagagatggaagtcttcagtaaagtctttaa
gcaaaatgaatttcaagattttcactttcgAGTCACTTTTTGAGTCACGT
GAGTCAAATCGcgtgtcttattggactagagaaagttAAAGTGAAATCGC
ACCATCtaattggatgaaaaaattattgtgtGAACTGGGGCTGAATATAa
ttctcattttaaattcaagatggcggcaagAAAAGTACGCTTTTTTGCTT
TGGAAAAAATGTTGtaaatcttttactttttatcgccttaggcaaagttt
caaacactacaaaTGACTTCTTCTCGGGTTACCAACTCTTAAAAAACTAT
GATCAAAGATGGTAGATATAGCTTGGTctagggatatataaaggtcagtg
atatTGACAAGTTTCTTCAGATCAgaatatattttactttttatcattCA
ATATCAGTACCGtgaatggtcctaaatccgacaaccctgcctaattccga
cacccACCCCAAATAACTGTACTGTGATGAAAAAAAACTATGTCTACAAA
CATTCCCTttcaagttgaacaataaactattggtaatgcaagaactctcg
aaacaaaacgtCTAacatgactataatgtcaagatgtcaattagaTCAAA
AACGAGATTCGGCTAATGCTTCGGAGCGCGTAGCGCATAGCATAGGGTTA
ACCCCTCACCCGGCCGGCAGTGCACACGTGTGGTGGCTTCTTTGGATTAA
TGGTgatcataacagttagcctaactcgtcagtcaGACTTATTTATATAT
AGTACTAAGACCTTTGTATAAGTAACCCCCAATAACGATTTTTCGGCAGC
CGGCTGGCCTAGTGGATAGGGTGCGCAATCGTCAGGATTTTTTgagcgga
acgaggaagaatttacaaaaatgaacttcaatgcattagtacttatatac
ctttaaatcatccaaatctgttcattctttttttttaatcaattaggaat
tatcagggaaacaagtaaaaaaaactgcatccaggtatctattttctttc
caaagatattcatgtttttcgacgtcaaggtgaaaacgcgatttagcgct
gaccacgacaccggaaaattctccacccacattgaaacaaatggctgtcg
ctattgagctcgttcatcttttcaatcgcggtttttttagtaaacccagg
gtaagattaggctacaatctatcacaaagtgctttatttgaaaatctatt
acaggccgtctggaatttcgaaaaataagaagaaattgcaatttttaaca
agattgcggattttttcatttaagcaccatacaccatctgaaacctgagg
atttcagctttctagtgatgaaatttgtttttagctatcatttccagctc
attagcgataagctaaagtttaacagtcatcgggccgattttcagaccgc
accagcaaaactccccacaccccgccacaTGGAAGACTAGATTCCATCTG
CCATTTTTGGCGTGATTTTGGTACTTCCGAAAAATTATTTcctgctggcg
tggtgtaaggaggcgattctttgaaaaggtgattttttttgtgtttcgaa
aatggaataactttgggaatacttaaccaattctaataaatgacccctca
tttttctcacaaaggtaaggactttcaaataaaattagtctggtttctaa
aaattgagggggaaattttggcctgtccaccctagcATTGGTTTCGAAAC
CTATAGGTTCCCAGTTCGAGACCCCCTTTGGTCACtattcaacttgaaaa
aaattctaagtccagccggatgcatctgaagcttTAGCCGAATGTCAAAA
GCGTGTATATACGCGTGAGTTGTAataataattacctctattctTTATTC
TGAATCCGAAAACAAATTCCTGCCCTAACTTTAGAATGGAAATACGAAGA
ATAGACATTGTTTTTCGTTTAGCGAATCAAAGATTGTATACAACCGGCTT
TCGTAGAACACAATGCCAAAGGAATTTTCAATCACGCAtttcattatttc
ttattcggcatttcaaaaatcgaaaatcagaaggttttcttcttcaattt
ccgaAGAACATGTTCCAAATCTTCAAACCATATTTTTCCGATAGCTTGAT
CAATCGGTGAACGGGATCTGAAAACAGAATGGAAAAAGACATCGTCAGTG
AAGAATGAGAGGTGATTAAACAAATTATCTGATTCACCCCGGGTATATAT
CCCATTCACCCCGTCTTACTAATATAGTCGAatgtgcgcaacgcactggg
ctcaacttcagtggcttcaaattattcataggcccaattgaagaacccca
gatatttacccaatgaacaagtgtgccaaatttcaaccaaatcgaacaat
ttttgaagtctccaggctgccccaaaggtttagcctcgttttggcgaaaa
actcgtccccaggccccaaaaatctaaattttcaaaaaatgaaaaaaaac
accaccagatattcacccaaggaacaagtgcgcaaaatttcagccagatc
gaacaatttttgaagtctccaggctgccccaaaggtttagcctcgttttg
gcgaaaaactcgtccctaggccccaaaaatctaaattttcaaaaaatgaa
aaaaaacaccaccagatattcgcccaaggaacaagtgcgcaaaatttcag
ccagatcgaacaatttttgaagtctccaggctgccccaaaggtttagcct
cgttttggcgaaaaactcgtccctaggccccaaaaatctaaattttcaaa
aaatgaaaaaaaacaccaccagatattcgcccaaggaacaagtgcgcaaa
atttcagccagatcgaacaatttttgaagtctccaggctgccccaaaatt
ttaggctcgttttggcgaaaaactcgtccccaggccccaaaaatcaaaat
ttttgaaaaatgaaaaaatcacccccagatattcacccaaggaacaagtg
tgcaaaatttcagccaaatcgaacaatttttgaagtctccaggctgcccc
aaagttttgggacatacacacacacagacagacacacacacattctcaga
ttctagctcaactgaagttgagaaaaactGCATTTTATTTAGGTAAAATT
CAACATGTTTTTAGTAATTTCAATGTGTAGttaattaaatttattttagg
tAAATGATTGATAAGGATGGTAATCTTTAAATACTTTCATGGTCTTGTAA
ATACACTTGAATATCGGTTAAGTTCTTTCCATTAAGGGTCCAGGTGCAGC
CAGGTGGGGGTTCTGTAAAGTGTTGGCACCTGTGAGGTATAAAGAAatag
gagaagtatgctattgtaaccaagaaaatatttggactaaaaaaggcctg
taaacttggcaatccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNgtgtgtgcttataaagaacatttcattttctggcttgaggaaatat
cttttcaaaacaaaattgaacggataacgaaatggaacataaacttattt
cgtggacgaagttttaaAAGGCTAGAAACTTCAATACTGgttattagaat
gttcagagcaaacttgagttctactaaaaagtcttatttcatcgggcgag
cttagaatttcttttgatacattttatacctccatgctgtGACCAAACCT
CAACTTTCACATTTTAAATCAAACTCAAGTCAAAAAACAGCCAATGACTA
CAGTGTTTGGAATTCTGACTTAGACTAACTGTATCAAGTAGGACAGATTG
CACCCAGGGTTTTCAATAAAGACGCTCTGCAATTATAAGATTTTTCCTGA
ATTTTGCTCAAAAAACTTtgttattttactttttcatccTTACCGTGGAA
AATCTCTCTTATCAACCCTTGTGTACTTTGGAAGGAATGAAAAACTGATC
CTTAAAGTAAGGGCAGCATAAACTATAGGTTAACCTTGAATCCCTTTCCT
TGGAtaaaaggattagacccattgaaatccagccaAAGGGGTAGAAACTC
AGGTTTTCTGAAAAGATTTAtttaactgttttttttttctagaacCTTGA
ATTTCTTGGTGGCAGTCATAATCAAAAGCAATGTTGATGGATTGGTTTGT
TTCATTTCTCAACCTATTCACAAAGTTTGGACCAGCCACTCGAAGTTTAT
CTAAATTCCTACTACATAGTATCACTGGCAAATGTGAACTAGAGAGAATC
TGTGACAGTGGAAAGTATGATTTTAGACAATGTCAGGAGATTGAGTATGc
tttataccattcaaagaaTGAAAATATCCGTAAAATCTTAGTTTCTGATG
CAATGAAAGTTAAGGAGGCAATGCAGACTATTTTACGTTTCAAGCGAATC
ATTCCCGAAGAAGGTATTGCTTTCTTGAACACTATGCccaaatttttgcg
aaaaatagTTAGCTACAATAAATTATTTGGTGATGTTGAGGAGTTAAAAT
TAACGAAATATGATGAAGAAAATACATCACACGAAGAGATGTTGTATCGT
TTGTGGACCCTCTTAAAGGAGGGTGACGACCTCAAGGAGCGCCATACTAA
ACGTTGGACTGAGATTGGATTCCAGGGCAAAAATCCTGCGACTGATTTTC
GTGGTATGGGTATATtatctttgaaaaatatgttgtacttgttggaaaat
aaaaaagacgtTGGCATGAAGATTTATGGACTTTCTAATCACCCTAATTA
TGGATTCTTCTTTGCCATTGTTGCTATCAATTTTACTGGTACCGCGTATG
ATTTCATGAAGAATGGAAAGCTTAAGGGTTATGCTTACAATTTAGCTGCC
GAGGAATACACACTGGAGgactttcaagagtttttctGTGAAATGTTTTT
GGAGTTTGCTGAATACTGGGTGATGAGAGAACCACCGAATATTATGTCTT
TTAATGCTATACGTGATGACTATTTGAAGGAAGTTCATAAGAGACTGGAT
ACTGGGAACTGGTCTATTGATTAGTTTTtatgttttagtttttatggttt
gtTAGAATGTTTGCAATGTAAAGCATACTGCAGCGTCTCTATTTTCAATA
ATTGATTTAATTAACTTAGtaaggttttttttaaataaagcaaTAAGATG
TTTTTGACATATTTTACAAAGTACCCTTTTGtcagaattttgaaatataa
aaatgaATTGCACTGCATCCTTAAAGCTTTTTCTGAtagttttttttagg
ttttctGTTACTTTTTTCGGTTAAATTTGCCCATATATGCGTCAATGAGG
GATCTATCATATTGTCGTGTTTGTCAATTTattcaataacttttttttaa
attcaacagTATAATATTTATTTTGGGAGCACTAATATTTTAGGTATTAT
AAGAATAATTAATTTTGATAAAGTAGATGCGATTTTTCCTTTGTAATGTT
CACTAAATATCAAATTATCGAAACTGTTTAGAAAGTTTAGGTACAAAATT
CTGAGAAAGATTTTTGGAACAACAAATTTTATTAACGTGGCTGTTTGTTC
CAAAGTGATGTTAGCAAAGTAATTTGACTTTCGCATTATTAAAAACTCTC
AACCCATTTACACCTAATGTCGTTGTAATGAAATCCTTATTAAACACTTC
TACCAAACCCATTAAAAGTCAGCCGCGCCGCCAAGGGTTGATAGACGTAT
GGAATTCCTTTTTTTTGTGATTGCTATTAAGAGGTATATATTTTAAGAag
ctttttttatgaaaaactttATTTCAGAACAAGGCAGATTTCCTATATTT
TAATTTCTGATATGGCTGAGGGAATGGTAATGTTTACCCTATTATTTTGG
TCAATAAGTCCGAAAATTACATAAATTAGCTAGCAAGTGTGAGTAGTTAA
GAATGTTGATTTGTATGTAATACCATGCTTCCCTAATGTCTCATAAAATT
AAGCTCTTGTTTAAAATATCGCTTTTGTTATCACTGTTTTCTCATTGACG
TATTAGATTTTGGAAAGTTAAAAAgacaaagtttttatttttttgaaatt
taatttccTAAACAGATAATAAATAAGATTTACAAGATAATTATAATTTA
TATAACTAGCTTAGCCACAAATTGTTGCATATAATATTTGTTGAAATAGT
ATTAGCTACAGCTCACTGGGGACAACAAAGACTTAATTATTGTCTATCAA
TATACAACTCTTTCCATAATATTTAAAAGATTAAAggattttccttttat
tttcaaaagagaaagAGCATTTGCAAATTTGTTTAAATGTTTGTGATAAA
TGGGAAAAAACGAAATCTTGACTAACGTATATCATAAAAATAGCATACGA
TTTACAATGAAACCTATTTGCATTTTTCTAATTCTTCCTTGATTTTGGCT
TCTGAAGCTCCAATAACTTCGCCACTTCTTTCTCCAttggtgaaaaattt
gaatgttgGCATAGCGCTGATTCCTTCCTTTTCTGCAATGTCAGTTGCTT
GGTCTACATCAACTTTAATGAATTTCACGTTGCCATACTTTCCCTCGAAT
TCCtataaaaatggaaatttatTCTCAGTTTTGTTATTTGTGtacttttt
gaaattcataGCCCCCTAAATGTTCTTCAATGGACAAATTGGAGTCTGGA
TGAGTAATCATATTTTTGATTAATCTCGATTATACATCGATATTGAAAAA
TCAGAGTTAAATAAAAACAGATTAGAGTTTTGTGAATTTTCAATCAAAGA
CTAGCCTCAAAATCCCACGGTCGGGTCTGATTAAAAGCTCGTTGAAGTGA
AATGTTGCTTCGATTGataaaagaaaactttcgtCAATACGCCACAATCT
ACtgcacacccccttctcacagacccactggaaaaattggccgtCTCTGG
TGTAAAATtgtactccaatttttgtccgcAATGAAAGTATGACTCCCTGC
AAAATGTTGTGCAAtctttcccatccccactggattttcttgaaaacaaa
agaactaaatccccaaccataaaaaatatcaatccccactgagtttcagt
ctgttatttttacccccactgcaCTGGcagaaaaaaatcctaccgggtct
atgAGAAAGGGGGTGTTACTGTGTTGTGCATATTGAAAGTTAACAAACAC
CGATAGGGTATACTCACTAACTTGGATCTTAGGGGCGATCATACGACATG
GTCCGCACCAAGTTGCAAAGTAATCCACACAAACATATTTGTTGTCAGCA
AGGATTTGCTGGTATTCAGCCATTGTTTTGACTTCTTGAACCATTTNCAC
AAACATATTTGTTGTCAGCAAGGATTTGCTGGTATTCAGCCATTGTCTTG
ACTTCTTGAACCATTTTGATGAAGTTTGTTTTCTAGTTTACTGAAATTCT
AAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048512TCONS_00048512Clytia hemisphaericatranscript
TCONS_00048513TCONS_00048513Clytia hemisphaericatranscript
TCONS_00048514TCONS_00048514Clytia hemisphaericatranscript
TCONS_00048515TCONS_00048515Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00048513-proteinTCONS_00048513-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_143supercontigscaffold_143:403428..414780 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ELMOD2PREDICTED: ELMO domain-containing protein 2 isoform X2 Homo Sapiens
ELMOD1ELMO domain-containing protein 1 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
20.07	17.83	9.21	9.64	27.23	20.82	22.71	24.83	15.98	19.73	13.41	14.17	10	8.31	7.98	10.23	10.22	11.64	9.15	11.79	9.03	8.24	26.71	22.06	20.54	21.5	18.66	16.65	22.15	24.23