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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048513 ID=TCONS_00048513|Name=TCONS_00048513|organism=Clytia hemisphaerica|type=transcript|length=3558bp
acaaccccgaccgaaagtgactgttcCACCCCTagagattcattcctctt
tgattgtcacgggaattaactgctTGTGGTTGAAAAGAAcggcaaattac
gcatgcgtattagtgtctatttgggtgagctggaaacattacatGAACTA
ACTCTAAGTAGTGATTGTTGGCAATTTTCCCTTTTGTGACCAATGACTGA
ATGACGAACTGACGAATGTCTGTTAATGACTGTTGAAACCTCTGCTGAAT
GTTGACTGTCGTCAATTATATTTCCAAAGAATCCGATTAACCTTCACCTC
CAGCTCAAGCTTGCTACaacCTTGAATTTCTTGGTGGCAGTCATAATCAA
AAGCAATGTTGATGGATTGGTTTGTTTCATTTCTCAACCTATTCACAAAG
TTTGGACCAGCCACTCGAAGTTTATCTAAATTCCTACTACATAGTATCAC
TGGCAAATGTGAACTAGAGAGAATCTGTGACAGTGGAAAGTATGATTTTA
GACAATGTCAGGAGATTGAGTATGctttataccattcaaagaaTGAAAAT
ATCCGTAAAATCTTAGTTTCTGATGCAATGAAAGTTAAGGAGGCAATGCA
GACTATTTTACGTTTCAAGCGAATCATTCCCGAAGAAGGTATTGCTTTCT
TGAACACTATGCccaaatttttgcgaaaaatagTTAGCTACAATAAATTA
TTTGGTGATGTTGAGGAGTTAAAATTAACGAAATATGATGAAGAAAATAC
ATCACACGAAGAGATGTTGTATCGTTTGTGGACCCTCTTAAAGGAGGGTG
ACGACCTCAAGGAGCGCCATACTAAACGTTGGACTGAGATTGGATTCCAG
GGCAAAAATCCTGCGACTGATTTTCGTGGTATGGGTATATtatctttgaa
aaatatgttgtacttgttggaaaataaaaaagacgtTGGCATGAAGATTT
ATGGACTTTCTAATCACCCTAATTATGGATTCTTCTTTGCCATTGTTGCT
ATCAATTTTACTGGTACCGCGTATGATTTCATGAAGAATGGAAAGCTTAA
GGGTTATGCTTACAATTTAGCTGCCGAGGAATACACACTGGAGgactttc
aagagtttttctGTGAAATGTTTTTGGAGTTTGCTGAATACTGGGTGATG
AGAGAACCACCGAATATTATGTCTTTTAATGCTATACGTGATGACTATTT
GAAGGAAGTTCATAAGAGACTGGATACTGGGAACTGGTCTATTGATTAGT
TTTtatgttttagtttttatggtttgtTAGAATGTTTGCAATGTAAAGCA
TACTGCAGCGTCTCTATTTTCAATAATTGATTTAATTAACTTAGtaaggt
tttttttaaataaagcaaTAAGATGTTTTTGACATATTTTACAAAGTACC
CTTTTGtcagaattttgaaatataaaaatgaATTGCACTGCATCCTTAAA
GCTTTTTCTGAtagttttttttaggttttctGTTACTTTTTTCGGTTAAA
TTTGCCCATATATGCGTCAATGAGGGATCTATCATATTGTCGTGTTTGTC
AATTTattcaataacttttttttaaattcaacagTATAATATTTATTTTG
GGAGCACTAATATTTTAGGTATTATAAGAATAATTAATTTTGATAAAGTA
GATGCGATTTTTCCTTTGTAATGTTCACTAAATATCAAATTATCGAAACT
GTTTAGAAAGTTTAGGTACAAAATTCTGAGAAAGATTTTTGGAACAACAA
ATTTTATTAACGTGGCTGTTTGTTCCAAAGTGATGTTAGCAAAGTAATTT
GACTTTCGCATTATTAAAAACTCTCAACCCATTTACACCTAATGTCGTTG
TAATGAAATCCTTATTAAACACTTCTACCAAACCCATTAAAAGTCAGCCG
CGCCGCCAAGGGTTGATAGACGTATGGAATTCCTTTTTTTTGTGATTGCT
ATTAAGAGGTATATATTTTAAGAagctttttttatgaaaaactttATTTC
AGAACAAGGCAGATTTCCTATATTTTAATTTCTGATATGGCTGAGGGAAT
GGTAATGTTTACCCTATTATTTTGGTCAATAAGTCCGAAAATTACATAAA
TTAGCTAGCAAGTGTGAGTAGTTAAGAATGTTGATTTGTATGTAATACCA
TGCTTCCCTAATGTCTCATAAAATTAAGCTCTTGTTTAAAATATCGCTTT
TGTTATCACTGTTTTCTCATTGACGTATTAGATTTTGGAAAGTTAAAAAg
acaaagtttttatttttttgaaatttaatttccTAAACAGATAATAAATA
AGATTTACAAGATAATTATAATTTATATAACTAGCTTAGCCACAAATTGT
TGCATATAATATTTGTTGAAATAGTATTAGCTACAGCTCACTGGGGACAA
CAAAGACTTAATTATTGTCTATCAATATACAACTCTTTCCATAATATTTA
AAAGATTAAAggattttccttttattttcaaaagagaaagAGCATTTGCA
AATTTGTTTAAATGTTTGTGATAAATGGGAAAAAACGAAATCTTGACTAA
CGTATATCATAAAAATAGCATACGATTTACAATGAAACCTATTTGCATTT
TTCTAATTCTTCCTTGATTTTGGCTTCTGAAGCTCCAATAACTTCGCCAC
TTCTTTCTCCAttggtgaaaaatttgaatgttgGCATAGCGCTGATTCCT
TCCTTTTCTGCAATGTCAGTTGCTTGGTCTACATCAACTTTAATGAATTT
CACGTTGCCATACTTTCCCTCGAATTCCtataaaaatggaaatttatTCT
CAGTTTTGTTATTTGTGtactttttgaaattcataGCCCCCTAAATGTTC
TTCAATGGACAAATTGGAGTCTGGATGAGTAATCATATTTTTGATTAATC
TCGATTATACATCGATATTGAAAAATCAGAGTTAAATAAAAACAGATTAG
AGTTTTGTGAATTTTCAATCAAAGACTAGCCTCAAAATCCCACGGTCGGG
TCTGATTAAAAGCTCGTTGAAGTGAAATGTTGCTTCGATTGataaaagaa
aactttcgtCAATACGCCACAATCTACtgcacacccccttctcacagacc
cactggaaaaattggccgtCTCTGGTGTAAAATtgtactccaatttttgt
ccgcAATGAAAGTATGACTCCCTGCAAAATGTTGTGCAAtctttcccatc
cccactggattttcttgaaaacaaaagaactaaatccccaaccataaaaa
atatcaatccccactgagtttcagtctgttatttttacccccactgcaCT
GGcagaaaaaaatcctaccgggtctatgAGAAAGGGGGTGTTACTGTGTT
GTGCATATTGAAAGTTAACAAACACCGATAGGGTATACTCACTAACTTGG
ATCTTAGGGGCGATCATACGACATGGTCCGCACCAAGTTGCAAAGTAATC
CACACAAACATATTTGTTGTCAGCAAGGATTTGCTGGTATTCAGCCATTG
TCTTGACTTCTTGAACCATTTTGATGAAGTTTGTTTTCTAGTTTACTGAA
ATTCTAAA Run BLAST on NCBI protein sequence of TCONS_00048513-protein >TCONS_00048513-protein ID=TCONS_00048513-protein|Name=TCONS_00048513-protein|organism=Clytia hemisphaerica|type=polypeptide|length=297bp
MLMDWFVSFLNLFTKFGPATRSLSKFLLHSITGKCELERICDSGKYDFRQ
CQEIEYALYHSKNENIRKILVSDAMKVKEAMQTILRFKRIIPEEGIAFLN
TMPKFLRKIVSYNKLFGDVEELKLTKYDEENTSHEEMLYRLWTLLKEGDD
LKERHTKRWTEIGFQGKNPATDFRGMGILSLKNMLYLLENKKDVGMKIYG
LSNHPNYGFFFAIVAINFTGTAYDFMKNGKLKGYAYNLAAEEYTLEDFQE
FFCEMFLEFAEYWVMREPPNIMSFNAIRDDYLKEVHKRLDTGNWSID Run BLAST on NCBI transcript from alignment at scaffold_143:403428..414780+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048513 ID=TCONS_00048513|Name=TCONS_00048513|organism=Clytia hemisphaerica|type=transcript|length=11353bp|location=Sequence derived from alignment at scaffold_143:403428..414780+ (Clytia hemisphaerica)
acaaccccgaccgaaagtgactgttcCACCCCTagagattcattcctctt
tgattgtcacgggaattaactgctTGTGGTTGAAAAGAAcggcaaattac
gcatgcgtattagtgtctatttgggtgagctggaaacattacatGAACTA
ACTCTAAGTAGTGATTGTTGGCAATTTTCCCTTTTGTGACCAATGACTGA
ATGACGAACTGACGAATGTCTGTTAATGACTGTTGAAACCTCTGCTGAAT
GTTGACTGTCGTCAATTATATTTCCAAAGAATCCGATTAACCTTCACCTC
CAGCTCAAGCTTGCTACGTAAGTGTGAGATTTATTccattttatcaaaac
aaacactGAAACAGTATAGGGCGGGTAagtaacttttttggggggtatct
tcagatcttcttcgcctggtgttttttctgttccatatagtgatagaaga
catttaaaaacttttttttcaattttatgcatttttgacgaattccagcc
caaaaaactgcccgggggagcttttttgaggtttattcttcatatctctt
ccaaaacttgctcaaactcaagatttagtgtttttttatgaaaatttaac
ctactGTAATGTgatgcattctgcgcaatttttaaggtcataagtccaaa
attggccgaatcCCCCTGGgggtaccgtgagaggtcctaaagccgacagc
ccagcctaattccgaccccccNtgggcctatttgtggtcaaaaaggtgtt
taattttgcataaattaatgcagattgtggggaaattccctgttttccat
cagttttttaccacaaataggcccataaattttgatctagagaagttggg
actttggtgtaatacacttttttgctcagtttgaagagctctatcatgtg
gtatagatttttttttaatttgaagaacccccaaaaatcatgaatttcca
ggccttgcaattttgcctgaaaacgcaaaaaatcgccaattactcgttac
ttgcacgataatatcgtggaaactttttgattttgtaatctacacatact
aattcgcgagtttccgttgttNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNt
gtggcgtttttttgcaaacttcaaaaaactgatttttgtcccgcctttgc
gggactttggcttaagtgcttgagtgcagcatagggtataaagtccaaat
atgtgtttcccgtaatttttgtatgaagagttaggtctatactgtccctc
tccaagttgaacaataaactaattgctagaactctcgaaacaaaacatct
aacaagatagctgtaatgtcaagatgtcaattaatgtaattaaaaaaagt
gcgagttgtaaaaataattaccttttattctggatcagttgctcatgttt
aaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNCCGATCTTATCCATTGATGAtctgcggcactatcgtaaag
ctagaatcgcttcgcgtacttttcgcttgagaaaatgattgacagattga
agtttttcatacCCGCGGTGCGCGCTGCGCGGGAGCNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNattgatgtttgtaagtg
cactttatagttttgattcccattgaagaatcatattctggttttcatgt
tattagatgctgttttagagctttaggtctacactgtttgggtagcaaaa
aatgctgtttaaggccaattttgcaagttcataaactttaaactaattga
ttcacacgtctgaaattttcagagatggaagtcttcagtaaagtctttaa
gcaaaatgaatttcaagattttcactttcgAGTCACTTTTTGAGTCACGT
GAGTCAAATCGcgtgtcttattggactagagaaagttAAAGTGAAATCGC
ACCATCtaattggatgaaaaaattattgtgtGAACTGGGGCTGAATATAa
ttctcattttaaattcaagatggcggcaagAAAAGTACGCTTTTTTGCTT
TGGAAAAAATGTTGtaaatcttttactttttatcgccttaggcaaagttt
caaacactacaaaTGACTTCTTCTCGGGTTACCAACTCTTAAAAAACTAT
GATCAAAGATGGTAGATATAGCTTGGTctagggatatataaaggtcagtg
atatTGACAAGTTTCTTCAGATCAgaatatattttactttttatcattCA
ATATCAGTACCGtgaatggtcctaaatccgacaaccctgcctaattccga
cacccACCCCAAATAACTGTACTGTGATGAAAAAAAACTATGTCTACAAA
CATTCCCTttcaagttgaacaataaactattggtaatgcaagaactctcg
aaacaaaacgtCTAacatgactataatgtcaagatgtcaattagaTCAAA
AACGAGATTCGGCTAATGCTTCGGAGCGCGTAGCGCATAGCATAGGGTTA
ACCCCTCACCCGGCCGGCAGTGCACACGTGTGGTGGCTTCTTTGGATTAA
TGGTgatcataacagttagcctaactcgtcagtcaGACTTATTTATATAT
AGTACTAAGACCTTTGTATAAGTAACCCCCAATAACGATTTTTCGGCAGC
CGGCTGGCCTAGTGGATAGGGTGCGCAATCGTCAGGATTTTTTgagcgga
acgaggaagaatttacaaaaatgaacttcaatgcattagtacttatatac
ctttaaatcatccaaatctgttcattctttttttttaatcaattaggaat
tatcagggaaacaagtaaaaaaaactgcatccaggtatctattttctttc
caaagatattcatgtttttcgacgtcaaggtgaaaacgcgatttagcgct
gaccacgacaccggaaaattctccacccacattgaaacaaatggctgtcg
ctattgagctcgttcatcttttcaatcgcggtttttttagtaaacccagg
gtaagattaggctacaatctatcacaaagtgctttatttgaaaatctatt
acaggccgtctggaatttcgaaaaataagaagaaattgcaatttttaaca
agattgcggattttttcatttaagcaccatacaccatctgaaacctgagg
atttcagctttctagtgatgaaatttgtttttagctatcatttccagctc
attagcgataagctaaagtttaacagtcatcgggccgattttcagaccgc
accagcaaaactccccacaccccgccacaTGGAAGACTAGATTCCATCTG
CCATTTTTGGCGTGATTTTGGTACTTCCGAAAAATTATTTcctgctggcg
tggtgtaaggaggcgattctttgaaaaggtgattttttttgtgtttcgaa
aatggaataactttgggaatacttaaccaattctaataaatgacccctca
tttttctcacaaaggtaaggactttcaaataaaattagtctggtttctaa
aaattgagggggaaattttggcctgtccaccctagcATTGGTTTCGAAAC
CTATAGGTTCCCAGTTCGAGACCCCCTTTGGTCACtattcaacttgaaaa
aaattctaagtccagccggatgcatctgaagcttTAGCCGAATGTCAAAA
GCGTGTATATACGCGTGAGTTGTAataataattacctctattctTTATTC
TGAATCCGAAAACAAATTCCTGCCCTAACTTTAGAATGGAAATACGAAGA
ATAGACATTGTTTTTCGTTTAGCGAATCAAAGATTGTATACAACCGGCTT
TCGTAGAACACAATGCCAAAGGAATTTTCAATCACGCAtttcattatttc
ttattcggcatttcaaaaatcgaaaatcagaaggttttcttcttcaattt
ccgaAGAACATGTTCCAAATCTTCAAACCATATTTTTCCGATAGCTTGAT
CAATCGGTGAACGGGATCTGAAAACAGAATGGAAAAAGACATCGTCAGTG
AAGAATGAGAGGTGATTAAACAAATTATCTGATTCACCCCGGGTATATAT
CCCATTCACCCCGTCTTACTAATATAGTCGAatgtgcgcaacgcactggg
ctcaacttcagtggcttcaaattattcataggcccaattgaagaacccca
gatatttacccaatgaacaagtgtgccaaatttcaaccaaatcgaacaat
ttttgaagtctccaggctgccccaaaggtttagcctcgttttggcgaaaa
actcgtccccaggccccaaaaatctaaattttcaaaaaatgaaaaaaaac
accaccagatattcacccaaggaacaagtgcgcaaaatttcagccagatc
gaacaatttttgaagtctccaggctgccccaaaggtttagcctcgttttg
gcgaaaaactcgtccctaggccccaaaaatctaaattttcaaaaaatgaa
aaaaaacaccaccagatattcgcccaaggaacaagtgcgcaaaatttcag
ccagatcgaacaatttttgaagtctccaggctgccccaaaggtttagcct
cgttttggcgaaaaactcgtccctaggccccaaaaatctaaattttcaaa
aaatgaaaaaaaacaccaccagatattcgcccaaggaacaagtgcgcaaa
atttcagccagatcgaacaatttttgaagtctccaggctgccccaaaatt
ttaggctcgttttggcgaaaaactcgtccccaggccccaaaaatcaaaat
ttttgaaaaatgaaaaaatcacccccagatattcacccaaggaacaagtg
tgcaaaatttcagccaaatcgaacaatttttgaagtctccaggctgcccc
aaagttttgggacatacacacacacagacagacacacacacattctcaga
ttctagctcaactgaagttgagaaaaactGCATTTTATTTAGGTAAAATT
CAACATGTTTTTAGTAATTTCAATGTGTAGttaattaaatttattttagg
tAAATGATTGATAAGGATGGTAATCTTTAAATACTTTCATGGTCTTGTAA
ATACACTTGAATATCGGTTAAGTTCTTTCCATTAAGGGTCCAGGTGCAGC
CAGGTGGGGGTTCTGTAAAGTGTTGGCACCTGTGAGGTATAAAGAAatag
gagaagtatgctattgtaaccaagaaaatatttggactaaaaaaggcctg
taaacttggcaatccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNgtgtgtgcttataaagaacatttcattttctggcttgaggaaatat
cttttcaaaacaaaattgaacggataacgaaatggaacataaacttattt
cgtggacgaagttttaaAAGGCTAGAAACTTCAATACTGgttattagaat
gttcagagcaaacttgagttctactaaaaagtcttatttcatcgggcgag
cttagaatttcttttgatacattttatacctccatgctgtGACCAAACCT
CAACTTTCACATTTTAAATCAAACTCAAGTCAAAAAACAGCCAATGACTA
CAGTGTTTGGAATTCTGACTTAGACTAACTGTATCAAGTAGGACAGATTG
CACCCAGGGTTTTCAATAAAGACGCTCTGCAATTATAAGATTTTTCCTGA
ATTTTGCTCAAAAAACTTtgttattttactttttcatccTTACCGTGGAA
AATCTCTCTTATCAACCCTTGTGTACTTTGGAAGGAATGAAAAACTGATC
CTTAAAGTAAGGGCAGCATAAACTATAGGTTAACCTTGAATCCCTTTCCT
TGGAtaaaaggattagacccattgaaatccagccaAAGGGGTAGAAACTC
AGGTTTTCTGAAAAGATTTAtttaactgttttttttttctagaacCTTGA
ATTTCTTGGTGGCAGTCATAATCAAAAGCAATGTTGATGGATTGGTTTGT
TTCATTTCTCAACCTATTCACAAAGTTTGGACCAGCCACTCGAAGTTTAT
CTAAATTCCTACTACATAGTATCACTGGCAAATGTGAACTAGAGAGAATC
TGTGACAGTGGAAAGTATGATTTTAGACAATGTCAGGAGATTGAGTATGc
tttataccattcaaagaaTGAAAATATCCGTAAAATCTTAGTTTCTGATG
CAATGAAAGTTAAGGAGGCAATGCAGACTATTTTACGTTTCAAGCGAATC
ATTCCCGAAGAAGGTATTGCTTTCTTGAACACTATGCccaaatttttgcg
aaaaatagTTAGCTACAATAAATTATTTGGTGATGTTGAGGAGTTAAAAT
TAACGAAATATGATGAAGAAAATACATCACACGAAGAGATGTTGTATCGT
TTGTGGACCCTCTTAAAGGAGGGTGACGACCTCAAGGAGCGCCATACTAA
ACGTTGGACTGAGATTGGATTCCAGGGCAAAAATCCTGCGACTGATTTTC
GTGGTATGGGTATATtatctttgaaaaatatgttgtacttgttggaaaat
aaaaaagacgtTGGCATGAAGATTTATGGACTTTCTAATCACCCTAATTA
TGGATTCTTCTTTGCCATTGTTGCTATCAATTTTACTGGTACCGCGTATG
ATTTCATGAAGAATGGAAAGCTTAAGGGTTATGCTTACAATTTAGCTGCC
GAGGAATACACACTGGAGgactttcaagagtttttctGTGAAATGTTTTT
GGAGTTTGCTGAATACTGGGTGATGAGAGAACCACCGAATATTATGTCTT
TTAATGCTATACGTGATGACTATTTGAAGGAAGTTCATAAGAGACTGGAT
ACTGGGAACTGGTCTATTGATTAGTTTTtatgttttagtttttatggttt
gtTAGAATGTTTGCAATGTAAAGCATACTGCAGCGTCTCTATTTTCAATA
ATTGATTTAATTAACTTAGtaaggttttttttaaataaagcaaTAAGATG
TTTTTGACATATTTTACAAAGTACCCTTTTGtcagaattttgaaatataa
aaatgaATTGCACTGCATCCTTAAAGCTTTTTCTGAtagttttttttagg
ttttctGTTACTTTTTTCGGTTAAATTTGCCCATATATGCGTCAATGAGG
GATCTATCATATTGTCGTGTTTGTCAATTTattcaataacttttttttaa
attcaacagTATAATATTTATTTTGGGAGCACTAATATTTTAGGTATTAT
AAGAATAATTAATTTTGATAAAGTAGATGCGATTTTTCCTTTGTAATGTT
CACTAAATATCAAATTATCGAAACTGTTTAGAAAGTTTAGGTACAAAATT
CTGAGAAAGATTTTTGGAACAACAAATTTTATTAACGTGGCTGTTTGTTC
CAAAGTGATGTTAGCAAAGTAATTTGACTTTCGCATTATTAAAAACTCTC
AACCCATTTACACCTAATGTCGTTGTAATGAAATCCTTATTAAACACTTC
TACCAAACCCATTAAAAGTCAGCCGCGCCGCCAAGGGTTGATAGACGTAT
GGAATTCCTTTTTTTTGTGATTGCTATTAAGAGGTATATATTTTAAGAag
ctttttttatgaaaaactttATTTCAGAACAAGGCAGATTTCCTATATTT
TAATTTCTGATATGGCTGAGGGAATGGTAATGTTTACCCTATTATTTTGG
TCAATAAGTCCGAAAATTACATAAATTAGCTAGCAAGTGTGAGTAGTTAA
GAATGTTGATTTGTATGTAATACCATGCTTCCCTAATGTCTCATAAAATT
AAGCTCTTGTTTAAAATATCGCTTTTGTTATCACTGTTTTCTCATTGACG
TATTAGATTTTGGAAAGTTAAAAAgacaaagtttttatttttttgaaatt
taatttccTAAACAGATAATAAATAAGATTTACAAGATAATTATAATTTA
TATAACTAGCTTAGCCACAAATTGTTGCATATAATATTTGTTGAAATAGT
ATTAGCTACAGCTCACTGGGGACAACAAAGACTTAATTATTGTCTATCAA
TATACAACTCTTTCCATAATATTTAAAAGATTAAAggattttccttttat
tttcaaaagagaaagAGCATTTGCAAATTTGTTTAAATGTTTGTGATAAA
TGGGAAAAAACGAAATCTTGACTAACGTATATCATAAAAATAGCATACGA
TTTACAATGAAACCTATTTGCATTTTTCTAATTCTTCCTTGATTTTGGCT
TCTGAAGCTCCAATAACTTCGCCACTTCTTTCTCCAttggtgaaaaattt
gaatgttgGCATAGCGCTGATTCCTTCCTTTTCTGCAATGTCAGTTGCTT
GGTCTACATCAACTTTAATGAATTTCACGTTGCCATACTTTCCCTCGAAT
TCCtataaaaatggaaatttatTCTCAGTTTTGTTATTTGTGtacttttt
gaaattcataGCCCCCTAAATGTTCTTCAATGGACAAATTGGAGTCTGGA
TGAGTAATCATATTTTTGATTAATCTCGATTATACATCGATATTGAAAAA
TCAGAGTTAAATAAAAACAGATTAGAGTTTTGTGAATTTTCAATCAAAGA
CTAGCCTCAAAATCCCACGGTCGGGTCTGATTAAAAGCTCGTTGAAGTGA
AATGTTGCTTCGATTGataaaagaaaactttcgtCAATACGCCACAATCT
ACtgcacacccccttctcacagacccactggaaaaattggccgtCTCTGG
TGTAAAATtgtactccaatttttgtccgcAATGAAAGTATGACTCCCTGC
AAAATGTTGTGCAAtctttcccatccccactggattttcttgaaaacaaa
agaactaaatccccaaccataaaaaatatcaatccccactgagtttcagt
ctgttatttttacccccactgcaCTGGcagaaaaaaatcctaccgggtct
atgAGAAAGGGGGTGTTACTGTGTTGTGCATATTGAAAGTTAACAAACAC
CGATAGGGTATACTCACTAACTTGGATCTTAGGGGCGATCATACGACATG
GTCCGCACCAAGTTGCAAAGTAATCCACACAAACATATTTGTTGTCAGCA
AGGATTTGCTGGTATTCAGCCATTGTTTTGACTTCTTGAACCATTTNCAC
AAACATATTTGTTGTCAGCAAGGATTTGCTGGTATTCAGCCATTGTCTTG
ACTTCTTGAACCATTTTGATGAAGTTTGTTTTCTAGTTTACTGAAATTCT
AAA Coding sequence (CDS) from alignment at scaffold_143:403428..414780+ >TCONS_00048513 ID=TCONS_00048513|Name=TCONS_00048513|organism=Clytia hemisphaerica|type=CDS|length=894bp|location=Sequence derived from alignment at scaffold_143:403428..414780+ (Clytia hemisphaerica)
ATGTTGATGGATTGGTTTGTTTCATTTCTCAACCTATTCACAAAGTTTGG
ACCAGCCACTCGAAGTTTATCTAAATTCCTACTACATAGTATCACTGGCA
AATGTGAACTAGAGAGAATCTGTGACAGTGGAAAGTATGATTTTAGACAA
TGTCAGGAGATTGAGTATGctttataccattcaaagaaTGAAAATATCCG
TAAAATCTTAGTTTCTGATGCAATGAAAGTTAAGGAGGCAATGCAGACTA
TTTTACGTTTCAAGCGAATCATTCCCGAAGAAGGTATTGCTTTCTTGAAC
ACTATGCccaaatttttgcgaaaaatagTTAGCTACAATAAATTATTTGG
TGATGTTGAGGAGTTAAAATTAACGAAATATGATGAAGAAAATACATCAC
ACGAAGAGATGTTGTATCGTTTGTGGACCCTCTTAAAGGAGGGTGACGAC
CTCAAGGAGCGCCATACTAAACGTTGGACTGAGATTGGATTCCAGGGCAA
AAATCCTGCGACTGATTTTCGTGGTATGGGTATATtatctttgaaaaata
tgttgtacttgttggaaaataaaaaagacgtTGGCATGAAGATTTATGGA
CTTTCTAATCACCCTAATTATGGATTCTTCTTTGCCATTGTTGCTATCAA
TTTTACTGGTACCGCGTATGATTTCATGAAGAATGGAAAGCTTAAGGGTT
ATGCTTACAATTTAGCTGCCGAGGAATACACACTGGAGgactttcaagag
tttttctGTGAAATGTTTTTGGAGTTTGCTGAATACTGGGTGATGAGAGA
ACCACCGAATATTATGTCTTTTAATGCTATACGTGATGACTATTTGAAGG
AAGTTCATAAGAGACTGGATACTGGGAACTGGTCTATTGATTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048513-exon-scaffold_143-1491911889:403428..403744 | TCONS_00048513-exon-scaffold_143-1491911889:403428..403744 | Clytia hemisphaerica | exon |
| TCONS_00048513-exon-scaffold_143-1510915933:403428..403744 | TCONS_00048513-exon-scaffold_143-1510915933:403428..403744 | Clytia hemisphaerica | exon |
| TCONS_00048513-exon-scaffold_143-1575043694:403428..403744 | TCONS_00048513-exon-scaffold_143-1575043694:403428..403744 | Clytia hemisphaerica | exon |
| TCONS_00048513-exon-scaffold_143-1491911889:411470..414611 | TCONS_00048513-exon-scaffold_143-1491911889:411470..414611 | Clytia hemisphaerica | exon |
| TCONS_00048513-exon-scaffold_143-1510915933:411470..414611 | TCONS_00048513-exon-scaffold_143-1510915933:411470..414611 | Clytia hemisphaerica | exon |
| TCONS_00048513-exon-scaffold_143-1575043694:411470..414611 | TCONS_00048513-exon-scaffold_143-1575043694:411470..414611 | Clytia hemisphaerica | exon |
| TCONS_00048513-exon-scaffold_143-1491911889:414682..414780 | TCONS_00048513-exon-scaffold_143-1491911889:414682..414780 | Clytia hemisphaerica | exon |
| TCONS_00048513-exon-scaffold_143-1510915933:414682..414780 | TCONS_00048513-exon-scaffold_143-1510915933:414682..414780 | Clytia hemisphaerica | exon |
| TCONS_00048513-exon-scaffold_143-1575043694:414682..414780 | TCONS_00048513-exon-scaffold_143-1575043694:414682..414780 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_143 | supercontig | scaffold_143:403428..414780 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR006816 | ELMO_dom |
Blast
BLAST of TCONS_00048513 vs. Swiss-Prot (Human)
Match: ELMD2 (ELMO domain-containing protein 2 OS=Homo sapiens GN=ELMOD2 PE=1 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 4.628e-56 Identity = 110/280 (39.29%), Postives = 161/280 (57.50%), Query Frame = 2
Query: 371 FVSFLNLFTKFGPATRSLSKFLLHSITGKCELERICDSGKYDFRQCQEIEYALYHSKNENIRKILVSDAMKVKEAMQTILRFKRIIPEEGIAFLNTMPKFLRKIVSYNKLFGDVEELKLTKYDEENTSHEEMLYRLWTLLKEGDDLKERHTKRWTEIGFQGKNPATDFRGMGILSLKNMLYLLENKKDVGMKIYGLSNHPNYGFFFAIVAINFTGTAYDFMKNGKLKGYAYNLAAEEYTLEDFQEFFCEMFLEFAEYWVMREPPNIMSFNAIRDDYLKEV 1210
F+S F +G R K+LL +TGKCEL+RI D+ ++ IE +L +SKN+ ++K +V + + I++ K I PE+ +F M L +I Y +L+ DVE ++ YD +N HEE+L +LW LL L R +K+W EIGFQG +P TDFRGMGIL L N++Y EN +I SNHP G+ +AIV IN T AY +K+ LK + YNL T+E F +F+C + EF ++W EP +IM FN R+ + +++
Sbjct: 2 FISLWEFF--YGHFFRFWMKWLLRQMTGKCELQRIFDT-YVGAQRTHRIENSLTYSKNKVLQKATHVVQSEVDKYVDDIMKEKNINPEKDASFKICMKMCLLQITGYKQLYLDVESVRKRPYDSDNLQHEELLMKLWNLLMPTKKLNARISKQWAEIGFQGDDPKTDFRGMGILGLINLVYFSENYTSEAHQILSRSNHPKLGYSYAIVGINLTEMAYSLLKSEALKFHLYNLVPGIPTMEHFHQFYCYLVYEFDKFWFEEEPESIMYFNLYREKFHEKI 278
The following BLAST results are available for this feature:
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