XLOC_030852 (gene) - C. hemisphaerica

Overview
NameXLOC_030852
Unique NameXLOC_030852
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_143:365078..371046+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030852 ID=XLOC_030852|Name=XLOC_030852|organism=Clytia hemisphaerica|type=gene|length=5969bp|location=Sequence derived from alignment at scaffold_143:365078..371046+ (Clytia hemisphaerica)
TATGGTAATGCAAGCTCACATTGAGAATGAATTGCAGTTATTTTCTGTAT TATATTTACGATATTACATATTGCTTGAAATATTATAGCTCGTTTCAAAT TAGATTTCCTCTGAATATTCTAGCATTTAAGATAATTAAGGTTCGTAAGA CTTTTTGAGAATAAACTGGATCAGTGATCAGGGTAATAATGATTATGCTT AAAgaaaaacacaccaaaatttaaagttgaaatgtgtGTGTTTTACTTAA TGGTTGTGCTTATTGCGAATGTCGATGCTCAGAGACCGGCGAAGATATTT CAACATGGCGCCGTCGCTGCTGATGTAACTACTTGCTCTACAATTGGTTC AAAAATCCTTCAAGAAAACGGAAGTGCTGTAGACAGCTATATTGCAACAG TGTTCTGTTTAGGTGTATATCATCCTATGTATTCTGGCTTGGGCGGTGGT GGCGTTGCTCTTGTTTACTCCCGCCAGAAGAGGGCGTATTATTCATATGA TTATACGGGCAGTGCACCTGCTGGAGTGTTTGATGCTAAACTACCAGAGA TTTTTAAAGAGAATATCAATAAGTCTTCAAGATACGGTAAGACATTGGAT TGGATTTTTGGCAATCCGATTttctattagcagattcatgtaaaaaagtc gcGAAAAAACGCCATGTGAAGTTCTGATTGGCTGAACATTGCACACATCA GCAAATTTTGTATGAGGTAACCTAAACTTGTACGATTAATTTGTGGGTTT TCGCCTCTGATTTTTGTTCATTAGGACCTTTGGTAATACTTGTACCAAGC CAACTCAAAGGATTGTGGGAAATGTGGAAGGATCATGGTCGGTTACCATG GCAACGACTAATTCAACCAATCATAGACTTTGCAGAGCGAAACGAAATAC AGATCGATGAGCAAATGATAAATTCTGTAAAAGTGGTTAAGTATCAATCA AGAACGTCTTATAACGATGATAATTTAGTGTAAGTAAAACTCTTACAAAA GCCTCTTAAATGGGGCTTCCGCAATTCCAACAATTTTTCCCCAATTTACG TCGAACCGTCCAAAAAAGAACCGAAATTCCGCCAACGAAAatgcctttgt tttgaaattaaagatTTCAGTCGAAAATTCCgagaattttgaatattttt tgccaattccGAAATTTCGTCTAAATTTCCTCAAATTCCGCCACTTCAtt cgaaaaaagggccgattccgcttcTCCAATAACAATGAACCCCTCTTAAA TGGCTTTACAATATTTCATTCAGTCAATCTAGTCAAAATGGACATATTTT CATTGTGCTAAAAATTCACCATTAGAAGTTATTTTGTCAGATTCGCCAGG CTTAACTACTTACTATTGATAGATCTCGGTAGATATaaataacttttatt gataCCAAATACCGTTTTTCTCTGCCGACACCCTCTAATATCAACTTTGA TTTTCACACGCAGGTCTTTCTTACAAGATGAGAATCACAGGTGGTTAGAC AAAGGGTCGATTATAAATACAACCTTGANACACACTCTAATATCAACTTT GATTTTCACACGCAGGTCTTTCTTACAAGATGAGAATCACAGGTGGTTAG ACAAAGGGTCGATTATAAATACAACCTTGATTGTCCAAACATTGAAAGAA ATACAAAGAACAAACATTAGTCTTTTGTATGGCGAAGAAGGTgctcaaaa aattgcaaaagagATCCAAGAAAAAGGAGGTAAAGtttgtgaaaatgaaa ttatattGGTGAAAGTTTTCAGAATCTATTCATAGGATCATTATATAGAA GATTCCTGTAACTAATATCAGATGGGGCCAAAATGAACGATGGGGGTTTG GAGAAGACCCGAAACCCCCATCGTTCATTTTGGCCCCATCTGATATTAGT TACAGGAATCTTCTATATAATGATCCTATGAATAGATTCTGAAAACTTTC ACCAATATTGCTTTTAAAGAACTTGATAAGGCTTTACAAAATCCATCAGG AGTCccagctggcacgcaacgttgttctaacgttcatataacgttatatg gacgttatgaactttatatggacgttgaaacaatgttgtgtgccagctag gaTAGGACACCCTCTCCGACTCAACCCTTAGATTCATATGACATAATTAA AAAACAGTCAGCTTTTCGAAGCCATTTCAATCGATTTACAATTCATTTTT GCGCACAGGAATCATAACAAAAAAAGACCTGACGAATTATACAGTCAAGA AAAGGAAGATTTTGCAGACTGAGATAACAAGTGATTTGACATTGTCCACC ATCGGTCCACCCTTTGAGGGCGGATTTTTATCACATGTTGCAAATATTTT ATCAGGTTATTAACATTCAATTTATATTGgattcttttgaaaaactttta ctGATGGTATAGAAATTCGATGGAGGAAGGTTTCTACACTTCTAATTAGT ACTTCCATTCCAATGTTAATGAGTTTCGTGGAAAAACTTTTAATAACGGG GACGGATTTAATGCTGGGTAGAACTTTACTTAACCTTATACTTTTAACAC GTTTGCATATTTTGACTTCAGGATATAACTTCACTGGAATGAGTCTGAGT AACACCCAAAATGCAACACAATTTTATCACATCTTACTGGAAGCATTCAA ATTTGCACTTGGGAATCGCGCTTACAATTTTGACGCCGATTTCTCGAGTG ATCCATCCTGGcttgaaaaggtaaaaaagaaGTTCTTAATTCTTCAAGTT TTTACAACGACAATACTGACCAAAAACAAGAATAAATCgtcaagaacttt tcatcaGCCTAACGAGATGAATCTGCTCCAAAAAAGTGAGGACAAGAAAA AGTTTAATTCCTACTCAACTGAAATAGTTTAATTCCTACTCAACTGTCCA TTTTTCTCCAGTTTTCAGACTACGTGACCAACAAAACTATAAGTGAAGAG TTCAGAGCCAGGTGGATCAGTATGCAACAAACACACCCTCCGGAATATTA TGGAGATGATTCATATAAAGATAAAGAGGGAAGTACATCACATACGTGCG TTATGGCAGAGGATGGCGAAGCAGTGTCTGGAACGAACTCCATCAACTTC TAGTAAGACAAACTCCAGTTTTGAAGAGATTCTGCTACAGAGGCAGAAAA TGTATTTCTTGATGGAGGGGGgacagaaaattttcaaattatggaGACGT AACAAGTATGTTAGAGTTACAGGGGACAAGTTTCTTAAGGTTACTTCAAG GGAACCACAAAAACTTTTCCAGATTACAGAGGCAGCCAAATTATGCATAT TAGAGTTACATAGAGTTTTTGTTTCCTCGATTCATAGGAAGAGTTTTCAC TCGACACCAAAtatactttttgtttttaagcTTCGGATCACTCATACGAT CAAAATCAACCGGAATCATTTGGAACAACGGGATGAACGATTTTTCCGAT GCTTCAAATATTTACAGGAAACCGCCTTCAAAATGGAACAAAATGGCGCC CCATAAAAGACCAGCGTCCTCTATGTCACCAGTGATAATAACGCGCAAAA ATGGTGATATTGCCTTGGTGATCGGAGCATCAGGAGGACCTAGGATACCA ATGGCTATAGCTCAGGTACGATGCCATAATTCTGACCAAGTTGGTATTCA AGAGTCAGACTAGAACTacgcgttttttttattagaaacttgttaaacca agcagcctcaatgtttcttaataaACCGCTcaggtgaaacaaggcatgtc ccaaatatattttgcatgACGCACACAGCTTCCCATTATTCATTAacttt catatatagctcaaaagaatcgtatcaacgagaggatttcgaaaagtgct gggtcaaaatttacatttacatcaagccaatctcaagatatcggccaaaa ctgattttgacgttataaaatacatcgaaaaaaacacgtcaaaaatacaa tttaaatgacgtcattattgaaaaaaggcgataattccgattaacttact acaatcaaagcaaaattttgactggagatgtaaattaacgattctaaaat atttcatgaaaaaaaatttgaaaatttatgatgacgtcagcattttttgc cgtgtttttatttttcccgacaccaaatgacgtcattcaaattttctgaa aatttttgaacaaatatttcagaatcattaatttacaactcaagtcaaaa tttggtgttgattgcaataataaaattgaagttatcgctgtttttcaata atgacgtgtttttcgatgtattttataacgtcaaaatcaatttttgaccg atatcttgagattggctcaatgcaaatttttgaccaagcacttttcgaaa tccgctcgttgatatgattcttttgagctatatatgataaaaaaacaaat tgaaaaatgttgtttgctcattctcagcctcagcatgtttctcagatgtt tcttagtttttaggcattctgagcctcatgtttcttaaaagtgtgtttct taaaaaaaacgtgtagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTAATCTGATATTC CTacggcgtattggcggccgcccacgctaaagctctagaGGAGCGGATTA AGGATTTAACTTAAAATTTGTCTgaccttcagagcaaagcgtgttGTAGC aaatttccacatctggtactAGATAAGAAAAAGCCGTGATAAAAAATCAC TATGCTAGGAAAACATAGAAAGCGTAAGGCGAGAGATAGCTGCAGCATCA TAGGCGGCTATATTTCAATAGTCTAGAATCAAACTGTCTTTTTAGTTAAG TCATcactagacgatcctatcgtctactcaagatcactaaaaaagggaat agtttaggagaggcgtgataaattcgggtggagtaagcagtggcggagat gtttacagtgttttgtgttttggtccaaaactctaccgccacttttttcc cgtaaaccgccctgacgcccgaACTCATTCCCATGTTTACTgacctttaa acggacgatagcgtCGTCTAAGTCATCACTTGCATTATTTTCGGGCTTGA GGCGAAAAGTAACTAGTGTGACATAGATATATTTTCTTATACTATCTATG TTTCAGGTGATATGGAAAAGCATCTTCTTCGGTGTTGAACTTGGTGAAGC TGTGGATGGCTACCGTCTCTTCCATAAGGATTTAAATGTCAATAGATTCT ATCAATACAAAAAAAGACCAGTGCCTCTAGACCTCATAGAAGCACTTCAA AGTATGGGACATTTATATGAAAAAGCTGTTGGGAGAAGTGTTGTGCAGGC TATATATCGTGGGTCTGACGGTATATTGAATGCAGCCTCTGATACAAGGA AAGAATCCGAAGCAGCTGGATATTAAAGGTGTGAATATGATAGTAGTGGC AAATGAGGAAAAGAGGAGAACAATAATGACATGGAGGCAAAGAGTGAAAC TTTGCTTTCGCCATATTTCACTAAATTCCCCGCGTTCCCCGACCATGATA ACAATGGCacatcaaaactttttgaatgcACTTAAAAAGAATTTAAGAAG GACTATACAATCTATTAAAACTAGCATCGAACTTAACATTGACAAATATG GATTTTTCTATTCATGGGCCTAATCTATTGACTTTACGTGTTTACACTAC GAGACACAAGATTCTACCAGTGACGTCAAACACGAGTTGATTAGTGACTC AAAATCCATCGTACTTTACTTTAAATAGCAAATTGGATCATCTAAAAACA AGTCGTCGGTTCTAGTAACAAAAGGTGAGAGAGGAAAATCAAATCCAAAA GTAAACTTTTCGCACAAGTGCTGTAACGGATACAAGGGATTCCACTAGTA TTTTATACTgtatatacacgctttttttataagaatacacttaaTAATAA GAATCTATCATAAAAATag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048508TCONS_00048508Clytia hemisphaericatranscript
TCONS_00048509TCONS_00048509Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00048509-proteinTCONS_00048509-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_143supercontigscaffold_143:365078..371046 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.02 0.03 0.29 0.12 2.4 2.83 2.31 1.93 1.59 1.05 1.9 2.15 1.5 3.69 5.68 4.36 0.18 0.14 2.18 2.51 0.8 1.01 1.7 2.71 0.31 0.25 0.1 0.05