XLOC_030780 (gene) - C. hemisphaerica

Overview
NameXLOC_030780
Unique NameXLOC_030780
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_142:552586..559643-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030780 ID=XLOC_030780|Name=XLOC_030780|organism=Clytia hemisphaerica|type=gene|length=7058bp|location=Sequence derived from alignment at scaffold_142:552586..559643- (Clytia hemisphaerica)
AAGACGAGCAGCAATATAAAGGAGGACATGAATAGAATGTCACTTTACCA GAGCTGTTAGCTAATCCCCAGTAATTTCCTTTGCTTCGAATATTGCCGTC TTTGCAAGAGGCTTGGTAGGGGCAAATGTAACAAATAATGTTATGTCCAT CCAGTGATTGCTCTTCGGTATCATTGACTCTGATGAAGGACACGTCATTC GCGTTGTAGGATGAACTATTACACTTAAGACAATCAATTCTGAAGTAAGT ACATAGTACGTAAGTACAAGTATAGTGATGATTCATATATTTCGCGATTG GGCATGACATTTTGGATGAATTATCAATGGAAACCCAGGAAAACTGACGG CGGTAATCATCAGATTCAAAAACAACACTTGTGTCTCCTGTCGACATGTG ATATTTTCCCGACTCGATTGTTGTATTTAGAATTTGAAGACTGGACTTGG AATCTTGTGTATAATGTATATTGGTTTTGAGGGCGCCAATACGGCCCAGT GGAGCTGAATTATTTTTGAACGTACAGTTTACAATTTTGTATGTAATATA GTGTGAATTGTACGCCATTAAAGCGGCCGCGCGGTATGCTTGCGTGTATT GTTCTTCGATGTAACAGTCCCTGAACTCGGAATTTCGGATCGTCAACGAC ATTGCCTTGATGAGTGCTGCTCCAAACAAGGCACTTTTAAATATACAATT GTCTATGGTGACACTTTTAGCTTCGGTTATGTCTAGCATAAAATGACTCA TATCGATATCAACTTGCTTTGAGTAAGATCCTTGGAAGTGACAATTCTCC AAGTGAATATTCGAATCTGTCAAGTGCCATTCGGGTACTCCTTGGATAAT TAAAGCTGAATGTTGAAATCGATTTCGAATGAATTTGAACTTGCCTTTAG AGAAGTACATTGTAAAAACTGTATCCTTGAAGTTTGTGTCAATGATTCTC ATCGTGGCGAGTTGGTAAAAGTTTAAAGTGTAATTGATAAAAAGACAACT TTCAATATGGATCTTTTGTTATCTTATCCAGTTTTGACGATTGTCTGTAT TGTGAGATCTTATGATTGGTGGTAGCTCTTTGACTATTGGATTAATAAAC TCTCTGAAGCTTTTTCGACCAGGACCTCGAAAAGTTGTGTTGTAAAAGAA TACGTCGATATCTTGGACATGATCGAAAAGTTGTATCATTTGGTATTTTG TGTTCAATTGTAAAATACATGTATTGTATCTGATTGAGATTCCATCTTTC AAAACTTTGAATACTGGGAGGAGGAAGATTGTCGAATTGTAAACGATTTT GAGACCATTTAATGTGATATTGTTATGCAACTCTATGAGATTATTTTCTT TAAGTGAATCTGAAAAATGAATGATTGTATTTTTTCGGCTTTTGTTCGTG CTGTGTGTCGTTAATGTAAGCTACACCTATATTCTAAACAAATCATTGAC CGTTGACACCTTCACTTGCTTCGTTCTGTGAAACGTAAATCTCTCGCGAT GATAATCCTACGAAAATTGGAAAATGAAGTTAACAACTCGCGTTGTAAAG ACCTCGTATTATACAGTGTGTCCCAAAAGAAGCGGACAAATTTCTATGTA AAGTAAAATCCTCAAAACTCATCATCTTTAAACTGAGCTTAAAATAATTG AAATAAAATTAAAATTTCTCTGAATAGTTTGGAAAAATGTATATTGGAAA AAACTATTTACCTTTGTATATCGCGCATAATAACAATAAAATGAAAGCGA AATTGAATCTCATTGTTTTAGTTTGTTTACACGCTTTTTTTTTTATAAGA ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATACCGTAAGAAT ATTTTTGGATGATTTTCGCCAAAAAGTTAAGAATATCCATGATGGAATGA AAATACACCATTCTTATAAAAAAAAAAAGCGTGTATACTGTAATCTGTTT TCTCCCGACAAATTATAATGATTTTACGTCAATCTACTTTATAACATTGG TGAACCAGTAATGAAAGGTTTTTGATTGAAAAGCTGAAATAATCATTTCT AAATCATTTCTTTCCAATTAAAGGCAACTAAAAGCAATAGTCGTTAGCCC TATACTTACCTTCGAATGTACTCGTCAAAATTAACATCTCATTATTTACA ATAGAAAAAAGCTGTAAAGAGTTAATATCAGAATTCCCTCCTTTTGGATT TCTTTATCATAAGAAGCATCACTGTAAAGCTCTTTTCAAATTATTTGTTG AATTAAAGTTGATAAAATGTCAAAGTTTAAATACACGTTTTCTTAAAAAC CTTTGAAGTCTTTGGATGCTCTTTAACTTTTTGAGTTTAAATCCTAAAAT ATTCTTGAATTGTTTTTATTTTCACCATTTTGTGTTTTTGTGCAGTTCCA AAGAAATCGGGAGCCCGAGAAGGCTTAAAATGTTCTTAACTTGTTCTTGA TATTTTGGCTATCGAAACATTATGTTTTTGTGGTATATTTTGTTCTTATA CAAAGAACATACGAAGAGCATTTCAATTCTGTGCTCGTCGAAAATAATGA CCGCAAATGCAAGTGGAATATTACACTGTTTTTTATAATAACAAACCATG TAAGAACATAAGGCTTCGATTGCGAAGACTGTATTGAGAGCAAAATAAAG ATATATTTTCATGATATAGAAAACAGACGCGCTTCTATGCTGACAAAGTA GAACAAACAAAAATTCTAAAAAATTTTCTCGCTCGCGTGCCTCCGAAAGG AGAGAAAGTTTTTTCTTTTGATTTAGAATGTTGTGTAAGTGTAAATGATA GGAGATACTGCCTATGGTATCCTTTGAGAACATTTTGATGCTTTGCGGAC TCTAAAACACGCAATTTTTGAATAAAAATACTCACAAAATGGTCAAGATG AGAAAAAGTTAAATAATAACATCCGAAGGCTTCCAAAATTCTAGATGCTC TTATAAAGTCAAATTTAAAAGTCAATAATATCTTAAGATCTAGCAATGGA AACCCTATAAACTATACCTCTAATCGAGAGAATACTCTTTGAGATGCTTT TTTTTTTCGTTAAAAGTTCTCTCAAAAATGTTGACGGTAGTATATTAAAA TATTTACAGTTTTGAAGGCGTATCTGTCATTTTCGAGGAATTAAGTCCAC CAAATTAGACAAATTTTCCAATTTTCCAAACTTTTTACAAATAAATTTTA CAGGATTATAATATCGATTCGTTGTTATAAGAAAAACTAGACTAGCTCAA ATAAAAATCCTAAATCATACTATTATTGTACTATATTTAATTCTGAATAA AGTGAACAATTATTATAAAGATTAAATTAATCAATCCTTCCATACATCAT TCTTGAGCAACAGATTTGATAGCAAAATTTTGTTGTAATGAAAATTAGCT ATCTGCAAAATGTACACGTTTAAAAGAAATTTGAAATAAAAGAGGCTACA CGTTTTTTTTTTATAAGAACGTCAAAAATTTTCGAAGCCTTCGGATGTTC TTATTTTTTTGGATTTGAAGCCTAAAAATGTTCTTAAAATGTTCTTATTT TCAGCATTTTTTGAGCATTTTGATGTAATTTCTTTTAAGAAATTGCATGT TTTTAAGTCTCCAAAGCCTTAGTATGTTCTTAGAATGTTCTTAAATTTCT GGGCCTCGAAGCCTCATGTTCTTATATAGTTTGTTCTTATAAAAAAAAAC GTGTAATTACCTATCAAAAAATTCTCTGAAAATAATTTCAAAATTACTTA AAAATCCCTAAAATTTCCTTCAGATTCCCTTTATCCCGTAAAGATGTCTA AAATCTCAAAAGTTTCAAGATAATACTAGAGACAGATCTCCAGAAGGATT TCAAAAATCACGAAAAGCTTACGTGTTTTATTCTTCCATCCTGATTCCAC AAAATCTGGTCATGATATTTTCCTGAAGTCAGTATACAATTATAATTTTC ACACAATCATATAGATTCGAATAATTCTAAATGCTAAATCACATTTTATA TTGGATTATGTAATGGTTTTTTCAAACCCCCTTCTTCAAGATTTATTAGA TAACAACAATCACTCTTTGTACTTCATATAATATACTTTTTTATAAGAGG ATAAATTTTCGCGTGGGCATTTTTTTTTAGCGAAGTGAGAATCTAAAAAT TTCGCATTAATGAAATTTCACAAATCAGCCTCTTTTCATTTAATTTCTGT CATTTGCCTACGCTTTTTTTGCGAAAATCCTTATTCTAGATTTTTTTCGT GAGGAGTAAATTTCATGAAAACGGCAAAAATTCGTGAAAATTGCAAAAGT CTCTCTTTTTTTAATTTAACCGCGCCTATTAAAGAAACGATCAAAGATAA AGACTGAGCCTTTATAAAGGACTAAAACGATCATACAAAGAATGGGTAAA CATATAATAACCGCTTCACAAACAAGCAATATTTCACCAAGGTTGTAATA AAGTTTGTCTTGAAGCAAATCCGCATTGTTAGTCACTGCCCAAAACATGT TGAAAAATGTCAATAATAGCAAAACTAAAATTGACACGATTTGAATAAAA TTCAAATTCTCCTCCCTAAACGGCTTTTGCACAAAATCATGAACAGCAAA AATAAAGAAAAGCAAACCCACTGGATACAATTTAACGATCGGTGACGAAA TAAATGTTGTCATGACGATCAATAAAAAACGGCGTAAAATCAAAACAGGT TCCCAGATGAGATGAGATTCTTGGTTTTTCAAATTCAATTTGAAAGGTCC GTTTAACACACCCAATATTTGATCTTTTTCATCGAGAGTGGCTTGGTCGA AAACGAAATGGTACTGGGTGAACGCCAGAGGGCGGATGACCATGAAATAA AGTGATAGGGGCGGTAAAGTAAGGATGAGAAGAAACTCGTTGGGCGAGAT ACGATATGATCGAAGGGCGCGGCAGCCAGTGTACAAGACTAACGGGAAAG GGACCACCCATAAACCAATCGCAACCATGATAAGATATTGCCAATCAGTA TAACATTTGATTGAGGCTTGAACGCGAAGATACGATTCGCCAGCAACCTC TACACAATGAATATTTCGTAAACAAAAAACTGAGATATTGGAATAACTGA GTAGCAAAACATTGACATATGCTCCTTTCAAACGACGTAAGAATGACTGC GGACGGACTTGAGCGGTAGTTCCATCCTTGAACCTCTTCTTTATAATGAA ATTGAGTGCAACACAGATAATCATTGCCAGTAAAAGAATTGCCAAACATG CTAACGATAAACTAGATTTCAATGCATCCATAACAACCATACTATTTGTA CACAGAGGACAAATTTTGATGAAACTGGAAGTGAAATCCAATTTGATATT GAAGAATGTAAACAAAAAGCTGACAAAGTTTGGCATGTGGTAATAAGTCT TTGCTGAAGCAACAACTCGAATGATGGAAGCGGTTTGGTAAAAAAAGAAT GTGATTTTAATTATGCCAGGTAGTTGGTAGGATGGTGAGAGGTTTTTTCT AAACGGAGAACTCGTAATCAATAGTTTGTTATTATCGTCGTTGTCCAGAA GTGATTCCTCGGTCTCAACATTTTTATTTTTATTTCTTATGTAGTTCCAA ACGTCTTTGTTGAACAAGAAAAACAAACAAATCAAAGCAGCCATCAATAT ATATCCCAACCACACGGTCCACGAATACTCACAACACGATTTATCCATAC ATTCGTTGTGACTGAATAAAGATAAAACATGTCCTTTTTGGCAATCGCCG CAAAGTCTCCCTTCCCGATTCCCAGCACAAGTGTTGTATGACTTGCATGT TTCAAAAGACGAGCAACAATATAAAGGAGGACATGAATAGAATGTCACTT TGCCAGAGCTGTCAGCTAATCCCCAGAAATTGCCTTTACTTCGAATAATG CCGTCTTTGCAAGAGGCTTGGTAGGGGCATAAATGGCAGTTAATGTTATG GACTGTTATGTTATCAGCTCTTTCATTGCCTGTTATAAAAGCATGACCGT TTGCGTTATAAGATGAACTATTACAGGTGATGCAGTGTAGTCTCAAATAT TGGTAGCTCTCAAACTCTTCGTAGATGTAACTTCCTTCAAAGCAATTCAA TTTTGAGGTCTTTGTGATTTCAAGCCATCCTGTTGGATAGCTATAAATAC TTGGCTCAATCCAAATGCTCCTGATATCATTAAACAAGGGGCTCCTAATA GAATTAACAACGGTGTTAACGATTGAAACTGAAGTATATGGTCTTTCACC GGTCCCTAGCTTGGTAAAAATAGATCCAGCTTGATTAGAACGGGCTGAAT TATTGTTGAAGGTACAATTGACTAAATCCATGTCAGTTGAGCGTGTTGTC AAGGCTGCAGCTCTGTCAGTTGGTATCATTGGTTGATCACTTATGTAGTT ATCTGCGAATGTCAGATTGATCAATTCTACACTCCCACGTTCTAATTTGA CTGCACCGTAAGATGCTCTCTTGAAAGTGCAATCTCGGATTGTTCCTTCC CAATAATTAGTATCACCAGGGTGAACTTGTAGCATGAATGCATAATCTCC TTCTTGATCCCCATACTCTGACGAACCTTGAAATGTACAATTGGTTACAC TGAGTCTGCCATATTCAATTGTAGTCTCTACCGATGATCGAAAAAACTGA CTCTGGTGTAATTGAAGATCTTTTATTGGATTAGATGAAAGTAAGGAATC AATGAGTATTGATCTATTAACTGTTATTCTTTGGAAGGTGATGGCCATTA TCTGATTAACAAAATGACAATCATCAAAAGTTATGCTTGCATGGTAGTCA ATACTAGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048382TCONS_00048382Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_142supercontigscaffold_142:552586..559643 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.1 0 0.34 0 0.03 0 0 0.11 0.12 0.23 0.41 0.05 1.82 2.22 3.41 2.89 1.25 1.57 4.02 3.95 0.75 0.28 1.24 0.8 0 0.13 0.08 0 1.19 1.42