XLOC_030546 (gene) - C. hemisphaerica

Overview
NameXLOC_030546
Unique NameXLOC_030546
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_14:464191..467442+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030546 ID=XLOC_030546|Name=XLOC_030546|organism=Clytia hemisphaerica|type=gene|length=3252bp|location=Sequence derived from alignment at scaffold_14:464191..467442+ (Clytia hemisphaerica)
aNTTCACTCGGAATGAGCTTAAGGTATAATACTCTCTTGAATTTGGTGGA TTTTTCCGGCTTTTGGTTAAATCGGCCAAATTAAATAACCTACCAAAGTT CTGAAAGTTGACCATCCGCCAAATAAAAtacccgccaaatttaacaaaat ctttttaggATAGAAATGTTATCTAATATCAGCATTTCTAAATAAAAACT ATCAAGCTAccaagtaattttttatttatgtgTCAAAGATTTCcccacca aattaaatccaccgcCAAATTATACTAAAAACCCGCTAAAAATTGCATAT TGCGCAACCGCCTAATCAAGTACACGTGACttgctaaatcaggtcttcgg ccgttaaatcAGGTCTTCGACCGTTAATTCAGGGCGCTGGAGCGCCCTCA TTCACAAACGTCGGAGCGCCCTCACCCACAACCCTAACGTGATGAGCCAT AGATTTGTTAAGTAATGACACTACTCGTAATGGTTAGATCCCGTCTTTAG AATTTGGTTGTTACATATGTGTAAGAATGATAGAGATAATGTTTATGTAT GAAGGAGATAACGTGTCTATGTAAAAGATATAATGTGTCTATGTAAAAGA TATAATGTTTCTATATAAAAGAGATAATGTTTCTATATAAAAGAGATAAT GATTATGTAAAAAAGTAATGTTTCTATATAAAAGAGATAATGTTTCTATA TAAATGAGATAATGTTTAAGTATTAAAATGCTGTATACTCTTTTTTTCTT CTCAGAAAAAGttcaaacaagaagaaaaagtcAATTGTGATCTCATCGAT ATGGCTTTGTGTAAGTCCTGCTTTATCAAAccctcatttttcttcatttt acttcaattttttccatactgtcgttttgcataagattcccATTCTCGCA CTAAAATTCCCTTTGtcacttttctagcggaaaaagaccaggacttcggg tagctgaaaaataagcttcggaaagttcggcagtttcgtgagtaaacaca agatGTTCTGTACTATagtagaccagcggccgaggtagtgaattgtgtca cttcgtagggcaccccttagatcagggaaatttttttatatcaTGCTctt aatagggtgtagaattgacaaaaaaaaatttactgcatttttcgagtgaa tcgatagAATTATCAAGGGTTGACTCAgtaaaaaatatcgataattttca atgcttaaaccaaaatatctcgagatctagacatcgatagttaacaaacc ataccattttttgGATACTGCTAATTCATGGCTATCCAGCTGtgagaatg ttttttttctgacaaTGCTCCCAGAAAAATACTGGCATCATCGGAAAAAg cccaaaacgtcgatttttcgccttaaaaatgccatttctcggcaccaggt ggtcgaaacttaataaataaccccattttcttcaTCTACTTTTCACACTT AATCCATTGGTAGCATTGGATAATTGATTTTCAGATCTCGAAAAAACCGT Ttgtaagttctatcgattaactaaaaatcgattcactcgaaaaatgcagt aaaattttttttgttaattctacACCCCATTAGGAGCATGATATCAAAGA ATttccctgatctaaggggtgccctacgaaaaactgttttaaggcctttt ctgatTCTCAGACGCTGGTCTAaagaaacaaaccctttccaatctcataC CGGTTATCCCGGGgaaaatagcggaaagattccggaaaagtaacaaaaat tttaGTGTGGAAATGGGAATTTTATACTAAATGACGGAAATTaaaggaaa acaaaacaaaacatttctcggattgcaaaaaaaaatatcaaatttttaac TGCACTGATGTGCTATTTTGCAAAATCCCAGTAGAACTTGATTCAAATCT GCGAAATCCGCCAAAGTTTATCTAATCaaaatactcttaggtgccaaata aacggatGGTGGgttcaaataaacgggggggttggaaaattttcgaaatt tgaaaaaacggAGGGGTatctaattgccgggggggttggaaattgtactt ctgaaaacccaaaaataaggtaaatataggctaaaatcaggtttttggga gaaaaataaggggacttctttttgccaactgaaaatattcttaaaattta ataaacgggggGGGGGGGGTTCTAAAAAGGTCTGgggtttttcgaaaaat taacaagcgggagggggggcgtttatttggcagcaaaatttgatttcaat ataaaaaagtatCAAATCTGAATTTCACTTGACAAGACATTCCGTCAGTT TTTCTCTTCTCAACACACCTCTTATTACTTTGGTTGTATATGATAATAAA GGGTTTTTGTTTTCACAGCAAACCGTTTACCGTTGAACATGGAGATCTTT TTGCGAGGCAAAGAGGAGCGCGAAGAGGAGGAAAAGCTGAAAGAATTACT CGACCAAGAAATCGATTCTGAGGAGAACAAggcgaaaaaaagaaaaaatt cgaaaaacaaCGCCAAAGGCGGAACAGGAAAAGGGCGGAAGAAAAAGGGC GCCAAGGAGAATGACGGGGATGAAAGTAGCGAAACTGAAGAGGGACAAAG TTCTAAAAGTAAGACCAAAGGAGGAGAGAAAGGCCACAAGAAAAAGACCG CGAAGGAGAGCGAGGGGCTTGAGAGCGCTGATGAGGAGAGCTCAATCGTT GATCAAAAACAGAATAAGAAATCAATTAACAAAGGTcgtaaaaaaacaat taaaagcgATGACTCTCGAACGGAGGGCAGTTCTTCGAATAAAGGACCCT TGCTGGAGAGAGACATGCCCAAATGTATTGTTCGCATAGAGAAAACGAAA GttcttaaaaatgttaaaactaCGGACCAAAAACAGAATGAAGAAAATGC AGACCAGAACGAGTTAGATAATGATAATACTGATTTTCAAAGGACGCTCA AAGATGTCCCCGAAACGGACTTGACCGATTCCGGTTTTGAGAAatcggaa aaatcggggaaacagaAACATAAACGTTTGCGAGTGATTGATTCGGATAG TGAATAgttctttttaatttctttttttcacttttcggTTTTGCTTTTGA ACTTTACATACGTCTGGTATTCTTTGATTCCTATTTTAACCGAGTATCTC TTttgtgaagtatcttataaaaactccagctcatcccaaattatcttcga attaaaaaaaaaaatcgaattacaGGGATTATTTTATACCACTTTCCAGT TG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048001TCONS_00048001Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00048001-proteinTCONS_00048001-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_14supercontigscaffold_14:464191..467442 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.61 11.03 4.43 4.44 36.49 28.94 21.62 24.87 13.3 17.82 13.4 10.95 8.77 9.89 11.16 11.89 15.81 14.74 6.41 7.44 11.22 11.21 22.47 18.97 15.68 18.61 5.43 5.24 16.58 18.38