XLOC_029993 (gene) - C. hemisphaerica

Overview
NameXLOC_029993
Unique NameXLOC_029993
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_120:382780..391389+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029993 ID=XLOC_029993|Name=XLOC_029993|organism=Clytia hemisphaerica|type=gene|length=8610bp|location=Sequence derived from alignment at scaffold_120:382780..391389+ (Clytia hemisphaerica)
GCTTGGTTGCATGACAGCGTCTATAAACAAGAtaaatctattttgatttt CTACCGTTTGTGCATATCAAAGACCATTTTCTAGTTATCATTTCTTTTTG ACGTGTCAGTTGTTGGCTGTGGTTTTATCGTCGTTTTCATGTTCTGATAA GGTGAGACCAAtcttattagtttttttacagGTCCGACCAACTCTAGAAt ctgaaaaatcgaaataaaatttgtaaatcCCTCTTTTAAGGGTTGGGAca agagaagtttttttcgcgttgtgtgtcggtgcaatgcaacatgctccatc ccaccaatgCGTGTCTCATGCCATggtttctttttggacctaccccggtg gggtggaggtcctataaattaacctttgtccgttcgttcgtccgttcgtt cgttcgttattagccttcctcgtgattggctcataagttttttctgattt tttgcacaaagatgtgaaactataaaccctcgaatgtgacggagcccgat tttcgaaaaataaaatttttgggcaaatttgggccaaaaaacggctaaaa aatgggttttttgaactttgtgaaaaattggatcattaactttttctgat tttttgcataaaagtaggtTACCATCATAGATAAAAGagggctcaagcag attttttcaaaaagattttgttggctcaaaaaacgcatgtttatctataa gaatcactattaataagcatacatcaatgttcttagtcaaattactcaat tttttgatgagatagatgtttttttgctcacgagggcttacttttgaaga atattNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttaggtatta gcttttctcgagattggctctttcattctttatgattttttgcacaaaaa tgcataactataaaccctcgaatgtgacggagcctgactttcaaaagaaa aattttggggcaaatttgggccgaaaaacggctaaaaaacgggttttttg gactttgtgaaaaattgggtcattaactttttctgattttttgcatgaaa gtagggtaccatcataggtaaaagatggctcaagtagattttttcaaaaa aattttggtggctaaaaaaacgcatgtttatctataagaatcactattaa taagcatacatcaatgttcttatacaaattactcaattttttgatgagat agatgtttttttgctcacaaagtcttgaacatgaaagaatatttcaagag catgaaattttggtttctaaacgtttttttataagaaacaaacgactaat agATTTAATAGATTGttactatttgtgttctgaatgattgtttaatggtc acgctcacgtagatatcaattatatatgtgttaaatgcataaccagatct aggtccataaaagtatcacttgttttgtttgtttcatgggacaaaaagtg agggaactacccaaaagacacgcctGATTTTTCTCGTGTCTACACCACAT tcttctttctaccaataaagaTTTTCCTATTTATAGCTTGATtgcttttt ttaattattttttgaaatttcgacatggaaaaataaataactttcgaact actttttcgaacctaatgtatgatagctcaaaattcaagcaTNCAtggaa aaataaataactttcgaactactttttcgaACCTAAtatatgatagctca aaattcaagcatggatttattatagagactctggataaacatcgaatgaa acggtgaagagcgaagtattgtctttctattgtttcaaaaaacaatcaat GTATAGGCCTTGTCCGCagaggacaactgtcatggcagCTCGAaagactc tgattttgaaaaatgattattaatcttatttctaaaaaagttctctaact tttATCTGATCGTACTTTTACtggctaaaagtttgaaaataaatgctaga ataccaagcaaATACAtatatgaaatctggtgtgagaaaaacatcatcat acgagtaaaatcaaacaatatgcttataatgacacgacATTTTTAATTGG GGATATCTTTCCAATACTTatccgagaagagctgagattgacatatatta aatgtgagtctcatagctccactttggtatgaaaatcttttggttgcacg tggtggcacggtggattttttgaggttgaagtttaagtatttctggtgtc aataatcaatttcttatacatacagtatgtggcccccaaaacggcgatca aatttgaaatttctctcaaatctagaggaaaagagattttacaaaNNNNN NNNNNNNNNNNNNNNNNNNNNtttttacagtatacccctggttgtcaaaa tgcaggtttggggcccccaaaacggaggtgtagttaaaatcaaattatta agcccagtggtaattgggggaaaaactatgaacatatttgtgttttccct taaatttacgacccgatgaatgtaaaatttatgatttttatgaaatattt caacattttcgatattgcaaagtccaaactgaaaatttagaaattttcaa aatgacaattttgatttaacagcgtcttaatcaaatttttgaaaaccaat ctcttttgaaaatagttccattcatgtatggaataagctgtgaaaatttt agaaaaaaagcctaactgaaactgaaaatattaagcNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNagagtgagttatatgcaatttttatctaattttggtgttaa aatatttcctttagacgcaaatatgttattttgaatctgtctcaaaccag aaaaaacatgttcatttttaagtataaccatcattctttcaaaataaaca aaaatcgtttaattctgataaatctacaagtcagaatcttcattttaatg aaaacctccgttttgggggccgtctccgttttgggggccatatactgtag catgtttttgcatctttctcgaaatttaaaacgtcataacgacgtataAT TAGTAATGAACTAGATGAGATTGAATCtcggaggagaacttaaagtctca tttgggaattggataaatgtattttgatgagaaattcaattaaaatgcta cgaaaaatcatttaatggtggaaggagggtgaacaataatgtcattactg aggacatgagaaattggcaaaaatcagctcgttgtttttccagtgtctat aataattccatgattcaagttagagcattttctatacgataaaaaaagaa tgaacaaaagatttaaatcctgaagcacACAATATCTCATCAaacctgta taatttttttggtgcacccggtataagaacataaggcttcgatggccaaa atgttacaCGAGTTagggttttaaggctttgcggactctaaaacacccgc tgggaccccagccccactggaaaatgtGTTCAAAATTTTGCCCCCGGTGG GAAAACTACCCTACAATTGCAGCCCAAGTTAGAAATCGACTTTGAtttat ccccattcgaaattcaatgtttaaaaattgtgctccaaaaccatccccaa tGGTTTTTtaaagcttggaacaatagaatttctatcccctgtgagacagg ggtgttttaaaacACCGAATTTcgtaggaaaatggacaaaaaatactcaa aaaatggcgataATAAGAACAAGAACAACCGTTTATCCTAAGTCTTATAT ATAGATTTTTCGACAGCTTTCTGGTGGTATAGCTGGTTTAGCTCTACACG AtttttttattggaaaattcaaaatctttggaGCATCctgatattcttaa atttttgagttttaagcctataaAAATGTgcttaatttgtttttaatatt ctgcccatcgaagacttatgttcttatatagtttgttcttataaaaaaac gtgtaaattgagtttgaaatttcggGACCTTTAGGGGTGACTGTGGCTAG CTTAGGCAAGGCAATCTTGTACCGGTATGTATACACGATATCAGGTGGCG AAAAATCGAGTCTattgtttaataaaaaaaacacaaaaatttggTCAAAG CTTTGCAAAACCTTGACACTGGCGTAAAGAAAATTGATATAATATCGAAA TCAAAATCTCTCATTATTCTAGCCTataagggggagggggtataaGCAGT GGGCGAATGATGGGGGTACCAAATTTAGTTTGGTACCAGTAAAACTCAGC CAGACCACTACTTACTGTAATGCAAATATAATAAAGTTTGATTTTCATAA TTCTAAACTAGACGTATAATTAAAGTAAACTATGGCACGCTAATTTACTC TCTCTTCTCATAAATTCGCATTTACTAGATTttaattacactttttttta ctttttaggaGAAAAAGCAACGCTAATTTTACGACCAAGCCAAGAATTGG CAAAGATCGACTGTATGGCTAAAGTCAAGGAGAAAGACATTGCTATTATT AAGCTGAAAATACATCAAACAATACTCGACGATATATTTAAGGATTCAAC tgatgattttgaaataatcaTTTATAATTACTTAAGAAAGAGATATGGGA GAGAACCAAAAGAAGACGATGATGTCCAAACTTGGGCGATATTTGACGAA ctacaaacaacaacaaaagggTCTACAACATTTTATCACGTCAAATGCGA TATAAAGAAGCGTAAATTCTTGGTTTCGAATCACGAAGACGAAACCAATG gtgaaatcatttttgtttaCTGGGGAACGAATTCGAAAGACataacaatt ttttgttttgttcgaTCAGCTTTGACCGGGGCGTGGTCTAtgctgaaaga aaaaaactacTCCTTTCCGTCATTATTTGCGAAACACTTTTTAGACCCTT CAAGAGTGTCTACTATCAAATTGTTCACTTTACTTGGAGCTGACACTGGC AGTCAAACCAAAATTTTTACTAAAGACGAAGAGGATATTTTCCAGCCTTC GATTGTAATGGAGCGGTGTGCTGTAGTAGAGGAGCTTAAGGCGTACTTTA CAGAAACCAAACATTCTACGGAATTAACCGATACCATCAAATTTATCAAT GCAAAAGAAAAAATCGTGTCCATGCAACGAGGGCAAATCAAACTTCCTTT AAAGCATACAGGTAAATCATTTGACCCATCACCCTATTTTAAAATGCTTA AGTTTATTGAGGACTCGATCAAGGAGAATTTACCAACAATCGAAGATGAC GAGAAATGGCGATTTATGGACGTTTGTCAACAAGTTGAAAGTGacaaaaa acaaactgacaAAAAACTTAAACAAGCTTTTGTCGAATTTTATGAAGATT CAGCAAAAGGCCATTCTATAATCGACCCTTCCTCGAGACTTTATCATAAA TACCAGGAATTCTTTAATGCTGCTTTTATCGGTCTATCTTATAAAGATAA CGAAATCGAATGGGGACCTGACGAAAAAGAGAGACAAGGCGAAAGTATCA CGATTCGATGTTTGCGCGCGGCACTAAAGAGAGCTGAAGTGTCGATATCT AACGATAAAGATGTTGATCAAATATGTTTAACTTTTCGTGACACGATATA CGAGAAAGATGAATCTTACAATTTGATAGAAATGATGAGGTGTGTGGACC GTGTTTTATCCGGCGATGAAAAGTTTACTGTCGTAAAATTCGGAAAAAGA AATTACCGACTTTGTGCTGAATCGTTTTATGAGGTTTTCTATCAATTCAT CAATGCTGTCCAACAAAGCTTGCCAAAGAAGTTCGAAAACCCACCAAAAA TCttaccttggaacaatagtaaAGAGAAAACGCCTTGCTTTTCCATTCAA GAACTTTATGACTTCTGTCGAGTAGATTCTAAACCAGATTTGACCAAGTT GAGTGAAATTCTGTGTAAGGACACTGTACTGTTTGATGCGAATGGGATTA ATAACATTCTCGATGGAGAAGGGGCAAATGATGAAGACTCGTCCTCCAGC TACGAAAGCTCCACTTCAACCGAGAATAAAGAGAGTCTCGACTCTTCCCA TAGCTATGAAAGTTCCACTGAAATCAAAACTGAAGAGAAACCAGACCCTT CCGACAGCTATCAGGGCAATCATTCGTTGGAACTCCTCGCATTAAACAAA TCACTGATTAATAAATCTGATCTTGCAGAGCTAAAACCGAAGTCAGACAA GACGCAGGCTGCCAACGAAAACGAGGAAACCGTTCGGCGTAAACATATTG AAGGAAGTGGATGTTCTGAAGAAACCAAATCACAGGAAACAAAGTATCCT ACAACCGAAGAGCATAAACCAGATCCGCTACTCTGGTTACCCACCTGCCA CCGACAGGATAAAACGATCCGAGATAGCTTAACCCAAACAAGAAAGATTG TACAAAAGATAGAAGGGAAGGATGGCATGTATAAGGTGGAAACACcacat ttgacaaaagatatttGGCGCAAGATCTCCACCATTTATCCAGAAATATG TCCGGTTCGTCTTGTCCAGTTCTTGAGAATGAATAGCGTCTTATTAGAAG AGGGAGACTATAATGAACTTTACCATCTATCAAATTGTTGTTGTCGTACA GAAGGTTGGAAATATCTTGTGGGAGATCGAATTACCCCTTCTTCAATTCA TGGAATAGAGTTTTGTGATGTCCTTGCTAGCAAGGGAAACACAttttatt accttcatgttAAACATAAGTTCGATGGAAATGCAGCGAGGGCTCTGTGC AGTCAAGTACGTGCCAGCATCAAATGTTTGTGGGAGTCGTTAGTAAGTCC ATCGAAAGAAAATATGGTCGAAAAATTCTACGATGCTGTTTCGGGCTACA GTAAGTTGGAGCTAGAAGATCATTCAAAAGATTCTTTACATAAAAAATTA ACTTTCTCGGAACTCAAAAACATCGGCTCAACAAAAGAGCATTTTTTGCA AACTCTACTGGGGAATGATACAAATCATTATGTTTGTTTGTCTCCAAGTA TAGGATCTGATTGCAGTTTTGAAGCCATGAGGGGATGTAATCTGAGTTAT CGCTTTACAAAGGATGATTTCAAAAGCAGGGAAAACCCGTTTAAATATCT AATCAAGGCTGGAATACTAAACGAAAACGGACGCGTCATGCCTCAGTTTT TCAACATCACTAATCCTCAAGACTTTACCGCTCGAGTCAAAAAGAATCTT AGCACCGAAGAGAAAGAGCAATTAAACCAAAGTCTTGGTAATATCCGTGA TACAATAAAAGGAAAGTTGCATATCAAAGGCTCTCTACTTTCAACGGGGT CGTTTGTAGCGAAAAATGAGTTTGTTCAGCTACATAgccattttgccaaa atttgtcGTGTTCATGGCAGCCAGGACCCTATTAAATTACGCATTCTTGA AGTTGAAGTGGGGAAGACCGTTGATACAAAGAAGGATGGTTCTGGGCAGA AAAAGGTTGCTACAAAGAAAAAAGACGCTTCTGCTAAGAAAAGGATCGGC AGACGCGATACAAAAGCAACAGATCCTAagagagcaaaaaaaacattaag ttgaaaaaattatagaaaaagttttttaggtCTTGGGGTCTTAAGTCTCT CATCATCAAATGATAGGTAATTCTCTCATTTATCCCTTGAAGTTTGAATA TACAGAATGTACATGCTTCTTCATATAGACCAAATAAGCTCTGAAAGGGT CCACAGTTGAATGATTTTCagattgaaatgtttttgagcCTGATCTTTCA ATAGAGTGCGCCTATCgttgaaaatacatttttgagCCTAgtattttcga taaaagccgatAAAAACGAATTATTTGCTTACTATCTTTTTGTGGGAGCA GGAAATTGTCAtacttcttcatcaaattctcCAAGATTTGGTCTTTCGGG ATGTTTTCACATTTACCGCTAAAACAGAAAGGAACACGTTAGTTGAATTT GGGAATTCTAGAAGGATTTTCtctaagaatttttgaaatccGAGAGTCAC CATAGGCTTGTTCTCAATTTGTTCTAGGTTTTAaccgaatttcaatcaac caaattATTCTTAAAATAAATACGTATTTCTAGTTTTATTTaggctttta aaattttactaacaagatttttcatttggaaacaaaatcttaaatttcaa CTAGGTTAGGTAGTAGATTTCTAGAGGCGTGTTGATTGTTTTCATTATCA TGATCTACGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00047009TCONS_00047009Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00047009-proteinTCONS_00047009-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_120supercontigscaffold_120:382780..391389 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.08 0.06 0.38 0.41 2.24 1.47 1.06 0.98 1.01 3.05 2.62 1.11 3.61 2.97 4.59 6.62 1.94 2.92 11.01 15.08 1.33 1.5 2.04 2.54 6.03 5.83 23.07 23.86 8.15 5.8