TCONS_00047009 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047009
Unique NameTCONS_00047009
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3953

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047009 ID=TCONS_00047009|Name=TCONS_00047009|organism=Clytia hemisphaerica|type=transcript|length=3953bp
GCTTGGTTGCATGACAGCGTCTATAAACAAGAtaaatctattttgatttt
CTACCGTTTGTGCATATCAAAGACCATTTTCTAGTTATCATTTCTTTTTG
ACGTGTCAGTTGTTGGCTGTGGTTTTATCGTCGTTTTCATGTTCTGATAA
GgaGAAAAAGCAACGCTAATTTTACGACCAAGCCAAGAATTGGCAAAGAT
CGACTGTATGGCTAAAGTCAAGGAGAAAGACATTGCTATTATTAAGCTGA
AAATACATCAAACAATACTCGACGATATATTTAAGGATTCAACtgatgat
tttgaaataatcaTTTATAATTACTTAAGAAAGAGATATGGGAGAGAACC
AAAAGAAGACGATGATGTCCAAACTTGGGCGATATTTGACGAActacaaa
caacaacaaaagggTCTACAACATTTTATCACGTCAAATGCGATATAAAG
AAGCGTAAATTCTTGGTTTCGAATCACGAAGACGAAACCAATGgtgaaat
catttttgtttaCTGGGGAACGAATTCGAAAGACataacaattttttgtt
ttgttcgaTCAGCTTTGACCGGGGCGTGGTCTAtgctgaaagaaaaaaac
tacTCCTTTCCGTCATTATTTGCGAAACACTTTTTAGACCCTTCAAGAGT
GTCTACTATCAAATTGTTCACTTTACTTGGAGCTGACACTGGCAGTCAAA
CCAAAATTTTTACTAAAGACGAAGAGGATATTTTCCAGCCTTCGATTGTA
ATGGAGCGGTGTGCTGTAGTAGAGGAGCTTAAGGCGTACTTTACAGAAAC
CAAACATTCTACGGAATTAACCGATACCATCAAATTTATCAATGCAAAAG
AAAAAATCGTGTCCATGCAACGAGGGCAAATCAAACTTCCTTTAAAGCAT
ACAGGTAAATCATTTGACCCATCACCCTATTTTAAAATGCTTAAGTTTAT
TGAGGACTCGATCAAGGAGAATTTACCAACAATCGAAGATGACGAGAAAT
GGCGATTTATGGACGTTTGTCAACAAGTTGAAAGTGacaaaaaacaaact
gacaAAAAACTTAAACAAGCTTTTGTCGAATTTTATGAAGATTCAGCAAA
AGGCCATTCTATAATCGACCCTTCCTCGAGACTTTATCATAAATACCAGG
AATTCTTTAATGCTGCTTTTATCGGTCTATCTTATAAAGATAACGAAATC
GAATGGGGACCTGACGAAAAAGAGAGACAAGGCGAAAGTATCACGATTCG
ATGTTTGCGCGCGGCACTAAAGAGAGCTGAAGTGTCGATATCTAACGATA
AAGATGTTGATCAAATATGTTTAACTTTTCGTGACACGATATACGAGAAA
GATGAATCTTACAATTTGATAGAAATGATGAGGTGTGTGGACCGTGTTTT
ATCCGGCGATGAAAAGTTTACTGTCGTAAAATTCGGAAAAAGAAATTACC
GACTTTGTGCTGAATCGTTTTATGAGGTTTTCTATCAATTCATCAATGCT
GTCCAACAAAGCTTGCCAAAGAAGTTCGAAAACCCACCAAAAATCttacc
ttggaacaatagtaaAGAGAAAACGCCTTGCTTTTCCATTCAAGAACTTT
ATGACTTCTGTCGAGTAGATTCTAAACCAGATTTGACCAAGTTGAGTGAA
ATTCTGTGTAAGGACACTGTACTGTTTGATGCGAATGGGATTAATAACAT
TCTCGATGGAGAAGGGGCAAATGATGAAGACTCGTCCTCCAGCTACGAAA
GCTCCACTTCAACCGAGAATAAAGAGAGTCTCGACTCTTCCCATAGCTAT
GAAAGTTCCACTGAAATCAAAACTGAAGAGAAACCAGACCCTTCCGACAG
CTATCAGGGCAATCATTCGTTGGAACTCCTCGCATTAAACAAATCACTGA
TTAATAAATCTGATCTTGCAGAGCTAAAACCGAAGTCAGACAAGACGCAG
GCTGCCAACGAAAACGAGGAAACCGTTCGGCGTAAACATATTGAAGGAAG
TGGATGTTCTGAAGAAACCAAATCACAGGAAACAAAGTATCCTACAACCG
AAGAGCATAAACCAGATCCGCTACTCTGGTTACCCACCTGCCACCGACAG
GATAAAACGATCCGAGATAGCTTAACCCAAACAAGAAAGATTGTACAAAA
GATAGAAGGGAAGGATGGCATGTATAAGGTGGAAACACcacatttgacaa
aagatatttGGCGCAAGATCTCCACCATTTATCCAGAAATATGTCCGGTT
CGTCTTGTCCAGTTCTTGAGAATGAATAGCGTCTTATTAGAAGAGGGAGA
CTATAATGAACTTTACCATCTATCAAATTGTTGTTGTCGTACAGAAGGTT
GGAAATATCTTGTGGGAGATCGAATTACCCCTTCTTCAATTCATGGAATA
GAGTTTTGTGATGTCCTTGCTAGCAAGGGAAACACAttttattaccttca
tgttAAACATAAGTTCGATGGAAATGCAGCGAGGGCTCTGTGCAGTCAAG
TACGTGCCAGCATCAAATGTTTGTGGGAGTCGTTAGTAAGTCCATCGAAA
GAAAATATGGTCGAAAAATTCTACGATGCTGTTTCGGGCTACAGTAAGTT
GGAGCTAGAAGATCATTCAAAAGATTCTTTACATAAAAAATTAACTTTCT
CGGAACTCAAAAACATCGGCTCAACAAAAGAGCATTTTTTGCAAACTCTA
CTGGGGAATGATACAAATCATTATGTTTGTTTGTCTCCAAGTATAGGATC
TGATTGCAGTTTTGAAGCCATGAGGGGATGTAATCTGAGTTATCGCTTTA
CAAAGGATGATTTCAAAAGCAGGGAAAACCCGTTTAAATATCTAATCAAG
GCTGGAATACTAAACGAAAACGGACGCGTCATGCCTCAGTTTTTCAACAT
CACTAATCCTCAAGACTTTACCGCTCGAGTCAAAAAGAATCTTAGCACCG
AAGAGAAAGAGCAATTAAACCAAAGTCTTGGTAATATCCGTGATACAATA
AAAGGAAAGTTGCATATCAAAGGCTCTCTACTTTCAACGGGGTCGTTTGT
AGCGAAAAATGAGTTTGTTCAGCTACATAgccattttgccaaaatttgtc
GTGTTCATGGCAGCCAGGACCCTATTAAATTACGCATTCTTGAAGTTGAA
GTGGGGAAGACCGTTGATACAAAGAAGGATGGTTCTGGGCAGAAAAAGGT
TGCTACAAAGAAAAAAGACGCTTCTGCTAAGAAAAGGATCGGCAGACGCG
ATACAAAAGCAACAGATCCTAagagagcaaaaaaaacattaagttgaaaa
aattatagaaaaagttttttaggtCTTGGGGTCTTAAGTCTCTCATCATC
AAATGATAGGTAATTCTCTCATTTATCCCTTGAAGTTTGAATATACAGAA
TGTACATGCTTCTTCATATAGACCAAATAAGCTCTGAAAGGGTCCACAGT
TGAATGATTTTCagattgaaatgtttttgagcCTGATCTTTCAATAGAGT
GCGCCTATCgttgaaaatacatttttgagCCTAgtattttcgataaaagc
cgatAAAAACGAATTATTTGCTTACTATCTTTTTGTGGGAGCAGGAAATT
GTCAtacttcttcatcaaattctcCAAGATTTGGTCTTTCGGGATGTTTT
CACATTTACCGCTAAAACAGAAAGGAACACGTTAGTTGAATTTGGGAATT
CTAGAAGGATTTTCtctaagaatttttgaaatccGAGAGTCACCATAGGC
TTGTTCTCAATTTGTTCTAGGTTTTAaccgaatttcaatcaaccaaattA
TTCTTAAAATAAATACGTATTTCTAGTTTTATTTaggcttttaaaatttt
actaacaagatttttcatttggaaacaaaatcttaaatttcaaCTAGGTT
AGGTAGTAGATTTCTAGAGGCGTGTTGATTGTTTTCATTATCATGATCTA
CGC
Run BLAST on NCBI

protein sequence of TCONS_00047009-protein

>TCONS_00047009-protein ID=TCONS_00047009-protein|Name=TCONS_00047009-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1029bp
MAKVKEKDIAIIKLKIHQTILDDIFKDSTDDFEIIIYNYLRKRYGREPKE
DDDVQTWAIFDELQTTTKGSTTFYHVKCDIKKRKFLVSNHEDETNGEIIF
VYWGTNSKDITIFCFVRSALTGAWSMLKEKNYSFPSLFAKHFLDPSRVST
IKLFTLLGADTGSQTKIFTKDEEDIFQPSIVMERCAVVEELKAYFTETKH
STELTDTIKFINAKEKIVSMQRGQIKLPLKHTGKSFDPSPYFKMLKFIED
SIKENLPTIEDDEKWRFMDVCQQVESDKKQTDKKLKQAFVEFYEDSAKGH
SIIDPSSRLYHKYQEFFNAAFIGLSYKDNEIEWGPDEKERQGESITIRCL
RAALKRAEVSISNDKDVDQICLTFRDTIYEKDESYNLIEMMRCVDRVLSG
DEKFTVVKFGKRNYRLCAESFYEVFYQFINAVQQSLPKKFENPPKILPWN
NSKEKTPCFSIQELYDFCRVDSKPDLTKLSEILCKDTVLFDANGINNILD
GEGANDEDSSSSYESSTSTENKESLDSSHSYESSTEIKTEEKPDPSDSYQ
GNHSLELLALNKSLINKSDLAELKPKSDKTQAANENEETVRRKHIEGSGC
SEETKSQETKYPTTEEHKPDPLLWLPTCHRQDKTIRDSLTQTRKIVQKIE
GKDGMYKVETPHLTKDIWRKISTIYPEICPVRLVQFLRMNSVLLEEGDYN
ELYHLSNCCCRTEGWKYLVGDRITPSSIHGIEFCDVLASKGNTFYYLHVK
HKFDGNAARALCSQVRASIKCLWESLVSPSKENMVEKFYDAVSGYSKLEL
EDHSKDSLHKKLTFSELKNIGSTKEHFLQTLLGNDTNHYVCLSPSIGSDC
SFEAMRGCNLSYRFTKDDFKSRENPFKYLIKAGILNENGRVMPQFFNITN
PQDFTARVKKNLSTEEKEQLNQSLGNIRDTIKGKLHIKGSLLSTGSFVAK
NEFVQLHSHFAKICRVHGSQDPIKLRILEVEVGKTVDTKKDGSGQKKVAT
KKKDASAKKRIGRRDTKATDPKRAKKTLS
Run BLAST on NCBI

transcript from alignment at scaffold_120:382780..391389+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047009 ID=TCONS_00047009|Name=TCONS_00047009|organism=Clytia hemisphaerica|type=transcript|length=8610bp|location=Sequence derived from alignment at scaffold_120:382780..391389+ (Clytia hemisphaerica)
GCTTGGTTGCATGACAGCGTCTATAAACAAGAtaaatctattttgatttt CTACCGTTTGTGCATATCAAAGACCATTTTCTAGTTATCATTTCTTTTTG ACGTGTCAGTTGTTGGCTGTGGTTTTATCGTCGTTTTCATGTTCTGATAA GGTGAGACCAAtcttattagtttttttacagGTCCGACCAACTCTAGAAt ctgaaaaatcgaaataaaatttgtaaatcCCTCTTTTAAGGGTTGGGAca agagaagtttttttcgcgttgtgtgtcggtgcaatgcaacatgctccatc ccaccaatgCGTGTCTCATGCCATggtttctttttggacctaccccggtg gggtggaggtcctataaattaacctttgtccgttcgttcgtccgttcgtt cgttcgttattagccttcctcgtgattggctcataagttttttctgattt tttgcacaaagatgtgaaactataaaccctcgaatgtgacggagcccgat tttcgaaaaataaaatttttgggcaaatttgggccaaaaaacggctaaaa aatgggttttttgaactttgtgaaaaattggatcattaactttttctgat tttttgcataaaagtaggtTACCATCATAGATAAAAGagggctcaagcag attttttcaaaaagattttgttggctcaaaaaacgcatgtttatctataa gaatcactattaataagcatacatcaatgttcttagtcaaattactcaat tttttgatgagatagatgtttttttgctcacgagggcttacttttgaaga atattNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttaggtatta gcttttctcgagattggctctttcattctttatgattttttgcacaaaaa tgcataactataaaccctcgaatgtgacggagcctgactttcaaaagaaa aattttggggcaaatttgggccgaaaaacggctaaaaaacgggttttttg gactttgtgaaaaattgggtcattaactttttctgattttttgcatgaaa gtagggtaccatcataggtaaaagatggctcaagtagattttttcaaaaa aattttggtggctaaaaaaacgcatgtttatctataagaatcactattaa taagcatacatcaatgttcttatacaaattactcaattttttgatgagat agatgtttttttgctcacaaagtcttgaacatgaaagaatatttcaagag catgaaattttggtttctaaacgtttttttataagaaacaaacgactaat agATTTAATAGATTGttactatttgtgttctgaatgattgtttaatggtc acgctcacgtagatatcaattatatatgtgttaaatgcataaccagatct aggtccataaaagtatcacttgttttgtttgtttcatgggacaaaaagtg agggaactacccaaaagacacgcctGATTTTTCTCGTGTCTACACCACAT tcttctttctaccaataaagaTTTTCCTATTTATAGCTTGATtgcttttt ttaattattttttgaaatttcgacatggaaaaataaataactttcgaact actttttcgaacctaatgtatgatagctcaaaattcaagcaTNCAtggaa aaataaataactttcgaactactttttcgaACCTAAtatatgatagctca aaattcaagcatggatttattatagagactctggataaacatcgaatgaa acggtgaagagcgaagtattgtctttctattgtttcaaaaaacaatcaat GTATAGGCCTTGTCCGCagaggacaactgtcatggcagCTCGAaagactc tgattttgaaaaatgattattaatcttatttctaaaaaagttctctaact tttATCTGATCGTACTTTTACtggctaaaagtttgaaaataaatgctaga ataccaagcaaATACAtatatgaaatctggtgtgagaaaaacatcatcat acgagtaaaatcaaacaatatgcttataatgacacgacATTTTTAATTGG GGATATCTTTCCAATACTTatccgagaagagctgagattgacatatatta aatgtgagtctcatagctccactttggtatgaaaatcttttggttgcacg tggtggcacggtggattttttgaggttgaagtttaagtatttctggtgtc aataatcaatttcttatacatacagtatgtggcccccaaaacggcgatca aatttgaaatttctctcaaatctagaggaaaagagattttacaaaNNNNN NNNNNNNNNNNNNNNNNNNNNtttttacagtatacccctggttgtcaaaa tgcaggtttggggcccccaaaacggaggtgtagttaaaatcaaattatta agcccagtggtaattgggggaaaaactatgaacatatttgtgttttccct taaatttacgacccgatgaatgtaaaatttatgatttttatgaaatattt caacattttcgatattgcaaagtccaaactgaaaatttagaaattttcaa aatgacaattttgatttaacagcgtcttaatcaaatttttgaaaaccaat ctcttttgaaaatagttccattcatgtatggaataagctgtgaaaatttt agaaaaaaagcctaactgaaactgaaaatattaagcNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNagagtgagttatatgcaatttttatctaattttggtgttaa aatatttcctttagacgcaaatatgttattttgaatctgtctcaaaccag aaaaaacatgttcatttttaagtataaccatcattctttcaaaataaaca aaaatcgtttaattctgataaatctacaagtcagaatcttcattttaatg aaaacctccgttttgggggccgtctccgttttgggggccatatactgtag catgtttttgcatctttctcgaaatttaaaacgtcataacgacgtataAT TAGTAATGAACTAGATGAGATTGAATCtcggaggagaacttaaagtctca tttgggaattggataaatgtattttgatgagaaattcaattaaaatgcta cgaaaaatcatttaatggtggaaggagggtgaacaataatgtcattactg aggacatgagaaattggcaaaaatcagctcgttgtttttccagtgtctat aataattccatgattcaagttagagcattttctatacgataaaaaaagaa tgaacaaaagatttaaatcctgaagcacACAATATCTCATCAaacctgta taatttttttggtgcacccggtataagaacataaggcttcgatggccaaa atgttacaCGAGTTagggttttaaggctttgcggactctaaaacacccgc tgggaccccagccccactggaaaatgtGTTCAAAATTTTGCCCCCGGTGG GAAAACTACCCTACAATTGCAGCCCAAGTTAGAAATCGACTTTGAtttat ccccattcgaaattcaatgtttaaaaattgtgctccaaaaccatccccaa tGGTTTTTtaaagcttggaacaatagaatttctatcccctgtgagacagg ggtgttttaaaacACCGAATTTcgtaggaaaatggacaaaaaatactcaa aaaatggcgataATAAGAACAAGAACAACCGTTTATCCTAAGTCTTATAT ATAGATTTTTCGACAGCTTTCTGGTGGTATAGCTGGTTTAGCTCTACACG AtttttttattggaaaattcaaaatctttggaGCATCctgatattcttaa atttttgagttttaagcctataaAAATGTgcttaatttgtttttaatatt ctgcccatcgaagacttatgttcttatatagtttgttcttataaaaaaac gtgtaaattgagtttgaaatttcggGACCTTTAGGGGTGACTGTGGCTAG CTTAGGCAAGGCAATCTTGTACCGGTATGTATACACGATATCAGGTGGCG AAAAATCGAGTCTattgtttaataaaaaaaacacaaaaatttggTCAAAG CTTTGCAAAACCTTGACACTGGCGTAAAGAAAATTGATATAATATCGAAA TCAAAATCTCTCATTATTCTAGCCTataagggggagggggtataaGCAGT GGGCGAATGATGGGGGTACCAAATTTAGTTTGGTACCAGTAAAACTCAGC CAGACCACTACTTACTGTAATGCAAATATAATAAAGTTTGATTTTCATAA TTCTAAACTAGACGTATAATTAAAGTAAACTATGGCACGCTAATTTACTC TCTCTTCTCATAAATTCGCATTTACTAGATTttaattacactttttttta ctttttaggaGAAAAAGCAACGCTAATTTTACGACCAAGCCAAGAATTGG CAAAGATCGACTGTATGGCTAAAGTCAAGGAGAAAGACATTGCTATTATT AAGCTGAAAATACATCAAACAATACTCGACGATATATTTAAGGATTCAAC tgatgattttgaaataatcaTTTATAATTACTTAAGAAAGAGATATGGGA GAGAACCAAAAGAAGACGATGATGTCCAAACTTGGGCGATATTTGACGAA ctacaaacaacaacaaaagggTCTACAACATTTTATCACGTCAAATGCGA TATAAAGAAGCGTAAATTCTTGGTTTCGAATCACGAAGACGAAACCAATG gtgaaatcatttttgtttaCTGGGGAACGAATTCGAAAGACataacaatt ttttgttttgttcgaTCAGCTTTGACCGGGGCGTGGTCTAtgctgaaaga aaaaaactacTCCTTTCCGTCATTATTTGCGAAACACTTTTTAGACCCTT CAAGAGTGTCTACTATCAAATTGTTCACTTTACTTGGAGCTGACACTGGC AGTCAAACCAAAATTTTTACTAAAGACGAAGAGGATATTTTCCAGCCTTC GATTGTAATGGAGCGGTGTGCTGTAGTAGAGGAGCTTAAGGCGTACTTTA CAGAAACCAAACATTCTACGGAATTAACCGATACCATCAAATTTATCAAT GCAAAAGAAAAAATCGTGTCCATGCAACGAGGGCAAATCAAACTTCCTTT AAAGCATACAGGTAAATCATTTGACCCATCACCCTATTTTAAAATGCTTA AGTTTATTGAGGACTCGATCAAGGAGAATTTACCAACAATCGAAGATGAC GAGAAATGGCGATTTATGGACGTTTGTCAACAAGTTGAAAGTGacaaaaa acaaactgacaAAAAACTTAAACAAGCTTTTGTCGAATTTTATGAAGATT CAGCAAAAGGCCATTCTATAATCGACCCTTCCTCGAGACTTTATCATAAA TACCAGGAATTCTTTAATGCTGCTTTTATCGGTCTATCTTATAAAGATAA CGAAATCGAATGGGGACCTGACGAAAAAGAGAGACAAGGCGAAAGTATCA CGATTCGATGTTTGCGCGCGGCACTAAAGAGAGCTGAAGTGTCGATATCT AACGATAAAGATGTTGATCAAATATGTTTAACTTTTCGTGACACGATATA CGAGAAAGATGAATCTTACAATTTGATAGAAATGATGAGGTGTGTGGACC GTGTTTTATCCGGCGATGAAAAGTTTACTGTCGTAAAATTCGGAAAAAGA AATTACCGACTTTGTGCTGAATCGTTTTATGAGGTTTTCTATCAATTCAT CAATGCTGTCCAACAAAGCTTGCCAAAGAAGTTCGAAAACCCACCAAAAA TCttaccttggaacaatagtaaAGAGAAAACGCCTTGCTTTTCCATTCAA GAACTTTATGACTTCTGTCGAGTAGATTCTAAACCAGATTTGACCAAGTT GAGTGAAATTCTGTGTAAGGACACTGTACTGTTTGATGCGAATGGGATTA ATAACATTCTCGATGGAGAAGGGGCAAATGATGAAGACTCGTCCTCCAGC TACGAAAGCTCCACTTCAACCGAGAATAAAGAGAGTCTCGACTCTTCCCA TAGCTATGAAAGTTCCACTGAAATCAAAACTGAAGAGAAACCAGACCCTT CCGACAGCTATCAGGGCAATCATTCGTTGGAACTCCTCGCATTAAACAAA TCACTGATTAATAAATCTGATCTTGCAGAGCTAAAACCGAAGTCAGACAA GACGCAGGCTGCCAACGAAAACGAGGAAACCGTTCGGCGTAAACATATTG AAGGAAGTGGATGTTCTGAAGAAACCAAATCACAGGAAACAAAGTATCCT ACAACCGAAGAGCATAAACCAGATCCGCTACTCTGGTTACCCACCTGCCA CCGACAGGATAAAACGATCCGAGATAGCTTAACCCAAACAAGAAAGATTG TACAAAAGATAGAAGGGAAGGATGGCATGTATAAGGTGGAAACACcacat ttgacaaaagatatttGGCGCAAGATCTCCACCATTTATCCAGAAATATG TCCGGTTCGTCTTGTCCAGTTCTTGAGAATGAATAGCGTCTTATTAGAAG AGGGAGACTATAATGAACTTTACCATCTATCAAATTGTTGTTGTCGTACA GAAGGTTGGAAATATCTTGTGGGAGATCGAATTACCCCTTCTTCAATTCA TGGAATAGAGTTTTGTGATGTCCTTGCTAGCAAGGGAAACACAttttatt accttcatgttAAACATAAGTTCGATGGAAATGCAGCGAGGGCTCTGTGC AGTCAAGTACGTGCCAGCATCAAATGTTTGTGGGAGTCGTTAGTAAGTCC ATCGAAAGAAAATATGGTCGAAAAATTCTACGATGCTGTTTCGGGCTACA GTAAGTTGGAGCTAGAAGATCATTCAAAAGATTCTTTACATAAAAAATTA ACTTTCTCGGAACTCAAAAACATCGGCTCAACAAAAGAGCATTTTTTGCA AACTCTACTGGGGAATGATACAAATCATTATGTTTGTTTGTCTCCAAGTA TAGGATCTGATTGCAGTTTTGAAGCCATGAGGGGATGTAATCTGAGTTAT CGCTTTACAAAGGATGATTTCAAAAGCAGGGAAAACCCGTTTAAATATCT AATCAAGGCTGGAATACTAAACGAAAACGGACGCGTCATGCCTCAGTTTT TCAACATCACTAATCCTCAAGACTTTACCGCTCGAGTCAAAAAGAATCTT AGCACCGAAGAGAAAGAGCAATTAAACCAAAGTCTTGGTAATATCCGTGA TACAATAAAAGGAAAGTTGCATATCAAAGGCTCTCTACTTTCAACGGGGT CGTTTGTAGCGAAAAATGAGTTTGTTCAGCTACATAgccattttgccaaa atttgtcGTGTTCATGGCAGCCAGGACCCTATTAAATTACGCATTCTTGA AGTTGAAGTGGGGAAGACCGTTGATACAAAGAAGGATGGTTCTGGGCAGA AAAAGGTTGCTACAAAGAAAAAAGACGCTTCTGCTAAGAAAAGGATCGGC AGACGCGATACAAAAGCAACAGATCCTAagagagcaaaaaaaacattaag ttgaaaaaattatagaaaaagttttttaggtCTTGGGGTCTTAAGTCTCT CATCATCAAATGATAGGTAATTCTCTCATTTATCCCTTGAAGTTTGAATA TACAGAATGTACATGCTTCTTCATATAGACCAAATAAGCTCTGAAAGGGT CCACAGTTGAATGATTTTCagattgaaatgtttttgagcCTGATCTTTCA ATAGAGTGCGCCTATCgttgaaaatacatttttgagCCTAgtattttcga taaaagccgatAAAAACGAATTATTTGCTTACTATCTTTTTGTGGGAGCA GGAAATTGTCAtacttcttcatcaaattctcCAAGATTTGGTCTTTCGGG ATGTTTTCACATTTACCGCTAAAACAGAAAGGAACACGTTAGTTGAATTT GGGAATTCTAGAAGGATTTTCtctaagaatttttgaaatccGAGAGTCAC CATAGGCTTGTTCTCAATTTGTTCTAGGTTTTAaccgaatttcaatcaac caaattATTCTTAAAATAAATACGTATTTCTAGTTTTATTTaggctttta aaattttactaacaagatttttcatttggaaacaaaatcttaaatttcaa CTAGGTTAGGTAGTAGATTTCTAGAGGCGTGTTGATTGTTTTCATTATCA TGATCTACGC

Coding sequence (CDS) from alignment at scaffold_120:382780..391389+

>TCONS_00047009 ID=TCONS_00047009|Name=TCONS_00047009|organism=Clytia hemisphaerica|type=CDS|length=3090bp|location=Sequence derived from alignment at scaffold_120:382780..391389+ (Clytia hemisphaerica)
ATGGCTAAAGTCAAGGAGAAAGACATTGCTATTATTAAGCTGAAAATACA
TCAAACAATACTCGACGATATATTTAAGGATTCAACtgatgattttgaaa
taatcaTTTATAATTACTTAAGAAAGAGATATGGGAGAGAACCAAAAGAA
GACGATGATGTCCAAACTTGGGCGATATTTGACGAActacaaacaacaac
aaaagggTCTACAACATTTTATCACGTCAAATGCGATATAAAGAAGCGTA
AATTCTTGGTTTCGAATCACGAAGACGAAACCAATGgtgaaatcattttt
gtttaCTGGGGAACGAATTCGAAAGACataacaattttttgttttgttcg
aTCAGCTTTGACCGGGGCGTGGTCTAtgctgaaagaaaaaaactacTCCT
TTCCGTCATTATTTGCGAAACACTTTTTAGACCCTTCAAGAGTGTCTACT
ATCAAATTGTTCACTTTACTTGGAGCTGACACTGGCAGTCAAACCAAAAT
TTTTACTAAAGACGAAGAGGATATTTTCCAGCCTTCGATTGTAATGGAGC
GGTGTGCTGTAGTAGAGGAGCTTAAGGCGTACTTTACAGAAACCAAACAT
TCTACGGAATTAACCGATACCATCAAATTTATCAATGCAAAAGAAAAAAT
CGTGTCCATGCAACGAGGGCAAATCAAACTTCCTTTAAAGCATACAGGTA
AATCATTTGACCCATCACCCTATTTTAAAATGCTTAAGTTTATTGAGGAC
TCGATCAAGGAGAATTTACCAACAATCGAAGATGACGAGAAATGGCGATT
TATGGACGTTTGTCAACAAGTTGAAAGTGacaaaaaacaaactgacaAAA
AACTTAAACAAGCTTTTGTCGAATTTTATGAAGATTCAGCAAAAGGCCAT
TCTATAATCGACCCTTCCTCGAGACTTTATCATAAATACCAGGAATTCTT
TAATGCTGCTTTTATCGGTCTATCTTATAAAGATAACGAAATCGAATGGG
GACCTGACGAAAAAGAGAGACAAGGCGAAAGTATCACGATTCGATGTTTG
CGCGCGGCACTAAAGAGAGCTGAAGTGTCGATATCTAACGATAAAGATGT
TGATCAAATATGTTTAACTTTTCGTGACACGATATACGAGAAAGATGAAT
CTTACAATTTGATAGAAATGATGAGGTGTGTGGACCGTGTTTTATCCGGC
GATGAAAAGTTTACTGTCGTAAAATTCGGAAAAAGAAATTACCGACTTTG
TGCTGAATCGTTTTATGAGGTTTTCTATCAATTCATCAATGCTGTCCAAC
AAAGCTTGCCAAAGAAGTTCGAAAACCCACCAAAAATCttaccttggaac
aatagtaaAGAGAAAACGCCTTGCTTTTCCATTCAAGAACTTTATGACTT
CTGTCGAGTAGATTCTAAACCAGATTTGACCAAGTTGAGTGAAATTCTGT
GTAAGGACACTGTACTGTTTGATGCGAATGGGATTAATAACATTCTCGAT
GGAGAAGGGGCAAATGATGAAGACTCGTCCTCCAGCTACGAAAGCTCCAC
TTCAACCGAGAATAAAGAGAGTCTCGACTCTTCCCATAGCTATGAAAGTT
CCACTGAAATCAAAACTGAAGAGAAACCAGACCCTTCCGACAGCTATCAG
GGCAATCATTCGTTGGAACTCCTCGCATTAAACAAATCACTGATTAATAA
ATCTGATCTTGCAGAGCTAAAACCGAAGTCAGACAAGACGCAGGCTGCCA
ACGAAAACGAGGAAACCGTTCGGCGTAAACATATTGAAGGAAGTGGATGT
TCTGAAGAAACCAAATCACAGGAAACAAAGTATCCTACAACCGAAGAGCA
TAAACCAGATCCGCTACTCTGGTTACCCACCTGCCACCGACAGGATAAAA
CGATCCGAGATAGCTTAACCCAAACAAGAAAGATTGTACAAAAGATAGAA
GGGAAGGATGGCATGTATAAGGTGGAAACACcacatttgacaaaagatat
ttGGCGCAAGATCTCCACCATTTATCCAGAAATATGTCCGGTTCGTCTTG
TCCAGTTCTTGAGAATGAATAGCGTCTTATTAGAAGAGGGAGACTATAAT
GAACTTTACCATCTATCAAATTGTTGTTGTCGTACAGAAGGTTGGAAATA
TCTTGTGGGAGATCGAATTACCCCTTCTTCAATTCATGGAATAGAGTTTT
GTGATGTCCTTGCTAGCAAGGGAAACACAttttattaccttcatgttAAA
CATAAGTTCGATGGAAATGCAGCGAGGGCTCTGTGCAGTCAAGTACGTGC
CAGCATCAAATGTTTGTGGGAGTCGTTAGTAAGTCCATCGAAAGAAAATA
TGGTCGAAAAATTCTACGATGCTGTTTCGGGCTACAGTAAGTTGGAGCTA
GAAGATCATTCAAAAGATTCTTTACATAAAAAATTAACTTTCTCGGAACT
CAAAAACATCGGCTCAACAAAAGAGCATTTTTTGCAAACTCTACTGGGGA
ATGATACAAATCATTATGTTTGTTTGTCTCCAAGTATAGGATCTGATTGC
AGTTTTGAAGCCATGAGGGGATGTAATCTGAGTTATCGCTTTACAAAGGA
TGATTTCAAAAGCAGGGAAAACCCGTTTAAATATCTAATCAAGGCTGGAA
TACTAAACGAAAACGGACGCGTCATGCCTCAGTTTTTCAACATCACTAAT
CCTCAAGACTTTACCGCTCGAGTCAAAAAGAATCTTAGCACCGAAGAGAA
AGAGCAATTAAACCAAAGTCTTGGTAATATCCGTGATACAATAAAAGGAA
AGTTGCATATCAAAGGCTCTCTACTTTCAACGGGGTCGTTTGTAGCGAAA
AATGAGTTTGTTCAGCTACATAgccattttgccaaaatttgtcGTGTTCA
TGGCAGCCAGGACCCTATTAAATTACGCATTCTTGAAGTTGAAGTGGGGA
AGACCGTTGATACAAAGAAGGATGGTTCTGGGCAGAAAAAGGTTGCTACA
AAGAAAAAAGACGCTTCTGCTAAGAAAAGGATCGGCAGACGCGATACAAA
AGCAACAGATCCTAagagagcaaaaaaaacattaagttga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029993XLOC_029993Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047009-proteinTCONS_00047009-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047009-exon-scaffold_120-1491911889:382780..382930TCONS_00047009-exon-scaffold_120-1491911889:382780..382930Clytia hemisphaericaexon
TCONS_00047009-exon-scaffold_120-1510915933:382780..382930TCONS_00047009-exon-scaffold_120-1510915933:382780..382930Clytia hemisphaericaexon
TCONS_00047009-exon-scaffold_120-1575043694:382780..382930TCONS_00047009-exon-scaffold_120-1575043694:382780..382930Clytia hemisphaericaexon
TCONS_00047009-exon-scaffold_120-1491911889:387588..391389TCONS_00047009-exon-scaffold_120-1491911889:387588..391389Clytia hemisphaericaexon
TCONS_00047009-exon-scaffold_120-1510915933:387588..391389TCONS_00047009-exon-scaffold_120-1510915933:387588..391389Clytia hemisphaericaexon
TCONS_00047009-exon-scaffold_120-1575043694:387588..391389TCONS_00047009-exon-scaffold_120-1575043694:387588..391389Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_120supercontigscaffold_120:382780..391389 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0765882 0.0555323 0.376419 0.409373 2.23629 1.4743 1.0599 0.98086 1.01286 3.05304 2.61819 1.10558 3.60781 2.96974 4.59206 6.61533 1.93722 2.92278 11.0149 15.081 1.33285 1.50152 2.0426 2.5416 6.03333 5.82697 23.0727 23.858 8.15322 5.79718
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047009 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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