XLOC_029189 (gene) - C. hemisphaerica

Overview
NameXLOC_029189
Unique NameXLOC_029189
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_100:197514..200980+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029189 ID=XLOC_029189|Name=XLOC_029189|organism=Clytia hemisphaerica|type=gene|length=3467bp|location=Sequence derived from alignment at scaffold_100:197514..200980+ (Clytia hemisphaerica)
tagccttaaaatgttcttaacttgtttttaatatctTAGCCATCGAagtc
gaagccttatattcttatatagtttgttctcataaaaaaatgtatactct
ggtattcttataaagactGCCTTATAAAATACAGATACAAtcgactctcg
cttattcgaacttctataattcgaatctctctgttatACGAACAAATAGA
TATTCCCCGTTCGAGTTTGAATTAGTGAAGGTTAACCGTAAAAAGAGTTG
AATATGGACCATTCAAATATGAACCACACCATGCCAGAGATAAATGGTAC
AAATCACCACAACCATCATCAAATGAACAACACTGGAAACCATATGATGG
GACATCAGGTACAATATAATAATGgacactctctctaattcgatattctA
CTATTCCATACGCaagatacgctccattattccataatattgaaagtcac
tgtcaaCAAGAAATTTTCATAAACGCCCCTCTACCATATCTATACGCttt
cttattcgatgaaaaatcCAATTCCCATTGAAAATCAAAGTAGAGAAAGT
CAACTCTATTcctttttgtacaaagatgtataatttgattttcttctaat
ttttttcacctCAAAGATGGTCTTTCTATCTCTACTCTGTACAGAATCGC
ACTATCGAATAAACATTTTTCAGTAAATAAGGTCGTTATTAGGTGATTGA
TTGTCTTTAACGGTGATTTTATTGTTCATTTCTTCTCGACATTTTACCGA
TGAAGTACTCTTTCTATCTAAAGGATCATGACGTTTCAATTTTCCAGATA
AGATTTACTGTTTCTGTCAATAATTCACATTTTCAGATGCCGATGTATTT
CCATGGAGGAACGATGGTAACTTTGTTCTTCAAAGATTGGATGACGATGA
ACCAATCAGGTCAGCTCAGATTTTCAAGCCTCCAATAAATAAAGGATATC
TATCATTATCGAGGACTTGACATAGAGTAAGATGGCCGCGTGGTTAAGGC
GTCAACGTGTTGAACAGGGAGTTCGCGGTTCGAATCCTTTCTTCAAACGT
TCTGGTAGTTCTTGAACAGTAACCGGACCGGCTGGTCGTGGACTCTGTGA
AAACAATCGGAAGACTGATGATGTTATTTTTTACGTAGTCGGCATAATGT
AATAAACTAAAAATCCTTTATACATATCGACACTTCAGAATGGCGTGAAA
AATAACGGCAGTTTCAGAACACATATATACGACTTAGCCGACTGTCTAAC
GCTAACAATCCTATATTACTGGGATATCTGTGCAGTCTGTGTATAGTAAG
ATACCGCCTCTATGCATTAGTGTTGTGTATGAAATCAAATAACAATTCAG
GAGTTGAAAAGTCAGTTAACCTGAAATAATaaacaacgaaaaaaaaattc
actttcattttcagagtTTGATGGAGCATGTGTTGCTTTGTTCGTGTTGG
CAACTTTGTATGAGGGATTGAAAATATTGCGAAAGTTTTTGTTGGTTAAA
ATGCTGAATGATAAGAAAGTGCGGGACGTCAACCCCTCAATGTAAGTATG
ATTATgagcaatgaagtataagcccgaagggctagaatcgaatcttctTG
GTAAGATTTGAAGCCTgccaaatcctaccaaagttgcgcggcctagcgcg
gtccgcctggtttttacaaaaatgacagattgaaactaaaatttacagcT
AAAtttagattcaatctgtcgtcaaaattacggcgcatattttaaggctt
cacttttccttgcctgagaaaggttaaagtttCGATTCTAACCCTTTGGC
CTTATACTTTATTGTTGATTATAAGCAAACTGTCGAACCCAGTCTATTAG
TtcgcttttttatgattctgatagcctATCAGTAAAATCTAAAAAGTGGC
GCAATGGGTTCTGGGTACGAAATTCGATTATAAAGTACGATTTACAACAC
CATCATTTCTGTATACTGGTTTTTTAAATCAAACAAACTCACCCTACAGC
TTAGGCAAAATATTGCTACTGAATGTGTTGGATATAGATTTGTTACTTTT
AGCCTTTGTATATATATTATGATTTAATGTTATTTATGTAATATGAAGAT
GTTATATGTACATAATATGCTTGTTACATgtattatatattttatattat
gGTATTATGTTACCCTCTACAATGGAGATCTCATGTTTGCATGTTGAAGA
GTCTTGATCTCCATTGTCCCCAGTGCACTCCTCCTTTGTTTCCTTTCTGG
AAGAATGGGCCTGAGTGAGCTCTCCTCCTTGTCATGTGGTTTTATAAGAG
CCTGCTCTCTCCAGCAAGGATGAGTTGAAGCCTGACCATCGACAAGATAA
GGTACTTTGATATTGATATATTAACATGAGGATCCTAGGTTATGTATTAG
GATTTATTCAGGACAAATGTCTTACAATGTAAATATATTTCAGTCAAGTC
ATGTTAATACCTTTGGTCTCTCATCATATTAAAAGATCAAAACAGCCACC
CAACAAATGCAATCTTTGTTTCAGCTCAAAATCTTCACAGCAAAAAGACG
ATGCAATCACTATTCACAATAAACAAATGTAAGTTCACGTAAATTGAGTA
ATCATTATTAATCTAACAATATAATAGGGGTTCTAAACCCAGCACTCTTT
cccattttaaaattatttcttgctcaACGCAACGTCAAAAATGGTGGCGT
TTTAGTTTTGGATTTTACATATTAAGTGACGTCAATAcagcaataaaaaa
atttatagattttgacgtcaatttacgTAAGCTTGGCCTTGTATTTAGCT
CTATGTTAAATATGGCGAAGGAAAATGTCTTACATTGTTCATTGATCCTC
AGGAAAGCACAGATTCGATTTCTGCAGGTCAGTACTTGTTCTATATTGCA
GGTTCAAAATACGGGTCATTGTCCACCTGATCCAGACTGTTTTGCATGTC
ATTCAAGTGTTCCTTGGTTATCTGCTCATGTTGGCTTTCATGACGTACAA
TTCTTTAGTATGTGTGTCCATTCTCCTGGGGTATGGTTTCGGATATCTGG
TGTTCGCTTGGTATGATCTGACGATCGCCAATGGTGTAGCTGTGAAGACG
AATGATAGCGATTGTTGTAATTTATAACAGGAAATACATTGGAAAAATCA
CAGATTTATTGAGCGAATTCTCTATTCTTTCATTAACTTGCAGTTTTAAG
CTAACCTTTTTCAATAGACTAGGgcggaaaaaatgaaattagttTGATGA
ATCAGATATCAAATTCCCAAGGTAGTTTAAAtggtttttgaaagaaagaa
atagAGTAATTTTGTGATAAAAATCTGTTTGGCGATGCGGTCAAAGATAA
GCTTATGGTTTTATCAAGCAACGACTTTTGTTTCGACAGAAACTGTCAGT
AAGTCAAAGTCATGCGTCACTAGATCAAAGGGTTTTAAATGGATTTTTTG
GATTAATATTATCATCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00045653TCONS_00045653Clytia hemisphaericatranscript
TCONS_00045654TCONS_00045654Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00045653-proteinTCONS_00045653-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_100supercontigscaffold_100:197514..200980 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SLC31A1high affinity copper uptake protein 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.54	9.64	6.87	5.17	1.17	1.18	1.39	2.06	1.63	1.85	1.96	1.58	10.17	12.89	7.14	9.5	1.3	2.38	13.32	12.55	3.55	2.65	8.61	7.65	4	6.07	1.22	1.21	7.06	4.89