XLOC_027621 (gene) - C. hemisphaerica

Overview
NameXLOC_027621
Unique NameXLOC_027621
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0004773:2019..5645+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_027621 ID=XLOC_027621|Name=XLOC_027621|organism=Clytia hemisphaerica|type=gene|length=3627bp|location=Sequence derived from alignment at sc0004773:2019..5645+ (Clytia hemisphaerica)
caatcattttctcaagcgaagagtacgcgaagctcTCTAAGAAAAACTCT AAGAAAAATCGATCGACTAAATTTTCCAAGTTCTAAGTTTTCTGTGTTGT AATTTAGttttaaacttcaaaaaagttgtattttgaCCTGCTTTTACGGG TTATTTATTTAGCATTGGGTGGTATGAAAAGTGGGTACAGAGTAATAAAT ACAacgtaaaaaatatattttttcttttttgatttttgattttgattatt GATTTGTAATTCATTTTTCAGAGCATTAAacttgaaataaataaaaaagt aaaatgggtCGATGTCGGACTATTTTTGTTGGGTTGGTAACTGGCCTGTT AGCTTTTGTCTTCATTACAGCAGGGGCTATCAAACTGACACCTAAAATTT CTGTGCAAGCACACAAGAGAATGGTAGGTGAAAggtgttatttttctttt tagttcaaTACTTACAGTGAAATGTTAAAACTTAGTTTGAAAAGCTCCTT AAAATCTACCGAATGCGAAATTTAGGTGAAAGCTATATATAGAATTGTGA AAAGAAGTACATTTAAAAGAATTGGTATTCTGAAATAAGCCAAGAAATTC TAAACTTCTTTAGTAAGTTAaggattttttcaaatcttagtTGAACTGAT ATATCATTTGTCAGATGAaatctactttaggcgtacaaactttcacgagc agaaactttcgcgattttcacgAAAGTAGATGTCTTAAAAATTCTTAACA GAGcaattcgcaaaagtttatgtttgcgaaaaacattttttttctcatat tcgcgaaagtaaatataaatttcacaattttttacCTCAAAAATTTCTGC TCgggaaagtttgtacgcctaaagtattatGTTATTTTACCGTTTTCTTG TATTGAAATTTAATGACCCAATTTAATACACAAGAAAGGCCCCTTTGTCT ACCATTGTTATGTTTTGATTAACCAAATTCTTAAATATTTCAGTATCGAG ATTTCGTTCAGTATGCTAAACTTCATCCAGCTGTTAAATTTGGTTATGAT ATTGATCCCAAGAAATTCATGCCACAAGTTGGTGTTGTGGAAGTCATCGC TGGCACTTTTCTTGTTGTTGGACCACGATTGACACGCATGATCTGTTGTT TAGTTCTCTCCTCTCTCATGGTTGGTGCACTGTATTTTGTAAAAGCTGCG AATAAACCTCGGGAAGAATGGGTTGTTCCTGCTGTGGTTCTCTTCTTAAC CTTCATTCGATTCAATTTATTCTTGTCACCCACTGTCATTGTCACTgaga aggaaaagaagaaaaataaaaaagagaagaaagcaAAGAAGGAACAATAG AATGTTTAGaacttttggaattttttaatttgtgcatttctaaagatttt actttataaCTACACAAATATACATTTTATAGGGTTTTCGGTTTTCGTTt gctttttatttaatttttaatatttgataTATCACATTTAGCATTTTATT CGTATTTATCTTATCACACATCATTATCTTAGAATGTTTCAGTAATTTTT GCTATGTCTTTCCGTGCACCCATCTTTTAAAATGTATTCAACCGCCttga tatttttatataaatcaACACCTGTTTGTTAAAAATGAACCGTCGAATGA ACccgattttcaagaaaaaaaattcaggtcGCCAGATCTGGATATGTCCT gttttttttgggattttcacgagattttatcattaaatTTAGTAAATTAT AGTACCGTATTCTCTAAAActtataaatttttatatatcggctcaaaatt tgatagaaattattAGTATATTATACTGTAGGTAGGATTTAATTTCTAGA Tctagctttttgaaaaatatatatctgacgtcaatttttttctcaaaact tccTAGATCGACTATGTATATAAGGGTTAAATGCTTTTCCTGAATAATAT ACCATCTTTTCATTTATCTGTTTCTTTCATTCAGATATAATAAAATGAAT ATATGCAATAATTACATACCAAAGCGACTTTTCCGATTGGCTGATGTGAC TAGAGGTCTGGTGACGAGTGCTCGTTTTGCAGCGGCCAATCAACAAGTAG AACAAGTACAGGAAGAACGAAATGAACTGGAAGAAAGTGACCCGtttctg aaaaatgaaatcaagAAATATAATACAGGTACGTGTGAACATGTATTTTG TAAGTGAAGGTGTGTCCCTTAGATTGATTCGTTTCATCTTTAAAGTTTTA TGTTTGCAAGTACTTGTTTAGTCCGAACGGAAATTTgaaggaaatttatt ttcattcattttgaaaaagaaggaCGAAGGATAATCCCGTCGATTAAGAC GGCGTGAGTCCTATCCAGTCATAGTTGCCTATTCCAGGATATCAGATAAA GCGTATCGGCGATATTACACGAAAACAAGAGCTGAGTGCTTAGTCTGACA TGCCTCCTGCTCTTATTTCAGAGTGTAttatatgtttttgataattcttt gtgttttccaaacattttcctctgcaatgacatcgattagagttaacctg tcatcactgacctgtgacctgtgacctgcgacctgtgacctgtgacctgc gttttacactaaccgcccGTTTAGGATTTGAGAACGATGGCTATTGCGCC TTCTTTTTATTGGTGggagaaaaaggttttgacttaaaattagTTAACGA TTATTCAAATGAAAATGGACGGACCATTGCAAAGTAATATTTTATAACTT TCTAAATAATTGAAATGTTCTTAGTCCCTTTATGTGAAGACGAGTAATAA GACCAGCTtaagataaaaaatgtttataaaattattaattgaaaattgaa atgaattaaaAATTGTTTATGTTTCCAGGTAAAAGATGGTTGGCACGAAT GATGGGTCAAGATCCGGACAATTTTTCACAGAAGGATGTGGATGAAGCCA TTGCATATTTGTTGCCAAGCAGTTTGTTTGCCAAAGATGCACGACCTGTC TTGAAACACCCTTATGAACTCTTCCCCAAAACTAAAGAATCATTGGTAAG ACTCTGTGTTTATTCAGCTTAATCCAGGTTTAAGTCTCCGACGTGTGAgg ttaaaatagaatggaaccttttttggtaaatttaaagtaacttagagtgg aaatcaatattttcaaccaaccaatattaaaaacaacaattttcaGTGCC GCCTATTCGCGTATTTTATCCACCTATGAATTTAGTAATTTAGGCTTAAT AGGAAGGaaaaaaacctctaaatttctGTTCATCTTTTTTTAGTTCGATA GTAACAACCGACCACTTTCAAGTGCTTTTTACACTGGTAAACCAAAGTTT TACGATTTGACGTACCAAGTATGGGAGTTGAAGGAAAAATTAGACACCAA TACCGCCATTACGGCTGAAGACTCCCCTGCGCCGTCCAATGAAGATAAAG TGATGCAATGGATGAAACAATATCAACTGGAGCAAAAATTAAACGAGAaa ctaaatgaaaaattataNGTTACGGCTGAAGACTCCCCTGCGCCGTCCAA TGAAGATAAAGTGATGCAATGGATGAAACAATATCAACTGGAGCAAAAAT TAAACGAGAaactaaatgaaaaattat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00043959TCONS_00043959Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00043959-proteinTCONS_00043959-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0004773supercontigsc0004773:2019..5645 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.49 9.73 2.87 1.72 10.69 7.52 9.33 9.43 7.8 6.72 8.21 5.86 6.52 5.53 12.48 15.85 28.29 22.13 3.71 5.37 12.71 13.1 22.23 17.46 2.73 3.08 10.69 7.74 15.35 14.53