XLOC_012054 (gene) - C. hemisphaerica

Overview
NameXLOC_012054
Unique NameXLOC_012054
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000388:182671..187804+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012054 ID=XLOC_012054|Name=XLOC_012054|organism=Clytia hemisphaerica|type=gene|length=5134bp|location=Sequence derived from alignment at sc0000388:182671..187804+ (Clytia hemisphaerica)
ATAACAATAACCTTGCAAAAATTGAATGCTCTGGAAGGTACCGTAGAAAT TGTATAAAAAGGAACCAAATGCTTTTATAAGACGCACGACTTACTCAAAT CGTCTGTTCATACTTTACTTCAACCAAGTTTAAaggtaagtttttatttc ttaacttttttgtaaTTCCCAAAGTTTTGCCTGCTTTTAAGAAAAGGAAC TTTGGCGGAACTTTTGGGTTTTATTTCACCCCCTTACGGAATTAAAAAAC AATCCACATTTCAAGTACAATTAATGTAACAGCTATGGCTTTCTTTGGAT GATTTCAAATTTCTTCCAGTCTAATTTATTCCGCCGATCCGATTGACACT TTTATAAACTTCCACCAACATAAACTGGCAAGTTCGGCGTATGAATTGAC TCACAATTAGtattcttcaaaatttcttcaTACTCTTGTCTCCCAAATAG ACCGGAAAAGCAGGGGGgtgggaaaattttctaaattctaataagcgggg ggggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNgggggggggggtggattttttctctcttaaca attagcggggggcgtctattcgggagacaagagtaattgCAATTTGAGGA ATTATCTTTTAGCCCTACAATATGTTCCGTTCATAAGGTTGTGAGCCAAT TTACTGCAGAACATCCAGATAAGAGGACAATATATCTAAAAGCAGATAAA ATAAAACTATTGAACCATAAATCAGCTTGGTCTTGAATCAAAAACGACCT AATCCTAAAGATAGTTTTTGTTTTCTGGGAGGCCGTTTTACAAATATCCT AAATACACACCAAGACTTTAAGCGCTTTCATATTTCGATAATTATATTAG CATTCTTTGTACCCGGAAACCGTAACACGCCCATTGGCTCATAACGATAA CTTTGCAAAGATTGACTGCTTTGAAAGAAGAATTAGCTTAGAAATTGTAT AAAAAGGAATCAAAAGGGGCATTCAAGTTCCCTTCGAAAAGTAAATGCTT TTATGAGACGCACAACTTACTCAAATCGTCTTCTCTTACTTTACTTCAAC CAAGTTTAAGcgtaaatttttatttccacTTAACTTTTTATTTCACCACC TTACGGAATGCAAAAAAGCCCACATTCCAAGCACTCTTAATATAACAGCT TTGAGATTTCAGGGGGTTGAATCGTTTTGGACAGCCCCGTAAAACACACT GTTTACTAGTATAAAAGGGGTACGAATGTCAGTTTCCCAGATGAAACGAA TTGTTTTTAGATTGACGTTATGTATGTTAAATAgtcgttgaaacaacgtt gtgtgccagcttgaCCAAGTCATGTGAGGATATGAAGTACCTTGTGtgtt taaatattaaaaattataCTACTGACATGCAAAATTGATCAAAGAAcctt cagtcattttcagtcatatGATTTCTacacaaaatattttaattaataAA TTCATCAGAGCTTGGTTCTTTGTGAATGAGATAAATCATGTATTTTTCAT ACCTTTATTTAGCTTATTGTGGgatattttcaaattaataATTAAATTTC CATCAATGAACTCTCAATATGTATGGAAGtattttactaatttttttaCT ATAAAACCTTTTGCACTTTTcctaaaaatcttcaaaaaacgaTTTTACTA CGGGAAGAACGTTTGCACtgaaaaaaagtctttaaagaattttcctttat tcaaaaatattttcgagaTGGGACGGCAAACTCAAAGGTTAGTTTTACTT CAATTTTCCTTACATGAGAACCAATTTTATCGGCCATAATTTTAACTCTC ACTTTAATTTGAAGTGTTCAAAATATACTGGTCTCGTTCGAATTATATGA atcactcccttctcacagatccggtcAAATTATTTCAGCCAGTGGTGATA AAAATGACGGGATgatgatggggattgatattcccatattttttatgata tggatttcaatttttttcgttttcaagtcagaaaattcattggGGAGTGA AATATAGTAAATACTTTGCAtcgaggattggtttatttgattattttctg ttgggatataaattggagtataattttccaccagggactatattttggta aatttttccgatgggaaggggtcccaatgggtctgtgagaaggaggtgtt aTAAAATATCTTATATGCGGAACATTTTGTAAGTAACTTTGCATCTATCT GCTCCTGAAGTACAATTATATGAATGCATCACCGAAAGgtgagaatttca aaaattacagggaaaaagctggttttaaGCCCCCTTTTGCTTTATTTAAA GAAATAGAGCATATTCAAAAACATCTTagcctttattttctggttgtTAA GAGAAAATGTGCACGTATACAAAAACATTCCATAAAAAGAATAATTTATA ATAAAAAGTGTCCCAAGGAATAACTATAATGTCATATTATGTCAACGTTC ATTCAAATATTACTATTGAAAAACCTATTGTCTTATCTCTAATCTGCTTA ATCTCGAAATAGATCTTATATTATGTTTTTATGAGTATTACATATATAAA TTGAATAGAATAcacacccgggggggggtactagggttggcgaatgaggg gtatgtgcggtcGGGACCttcgaaaaccgacccttagagagactttttta attttttttttcgatctttgaaaaaagtcatacccttagagagattttat cacaatttttttttcgatttttgaaaaaactatacccttagagagacttt attacaattttttctctggaaatcaaaaaattccctaaaaatcctgaagt ttcggacccttagagagactaatttaaaacttttagatttttccgaccct tagagagactttgaaaggtgaaaaaaccgacccttacggtccgcacatac ccatcatccatttttgcttagtacccccccccccgaaatACACAGAAGTT TCACTTTCTGTCACTCTACCTTTGCCACGCCAATAATATATACTGCAAAC TTTCGCGAGAAAGGTCTGAGTAGTATTTGGAGGGAATAAGATAAAGCACA TCATCATGAGACTTTCAACATGTTTACTTTACAGAGTTTCAAGTGCATTG AGAATGCGTTTCGGAGTCGTGGTAACAGATGATGATCCACTCTGGGGTGG AGAGAAAGGCGTCGGTGATTACATCATTAAAAGATTCGAAGGAAGAAACT CCTCCCGAGATGAGTTTACAGCCATTCACGGCGTCAGTGGTCAATTACCG GACAAAAAGGATATTATTACATATGATGGTTTCATATTCACTGGATCACA CCACTCCGTTAACGATGATTCACCCTGGATGCGACGTCTTGAAGTTTTCA TCCGCAACGCGTATCAGACGTCACAGGAATTCGGCCGCCCTCGCATGGTT GGTATTTGCTTCGGTCATCAGTTGATTGCCAAAGCCTTAGGAGGACACAT CGGTGGCAATCCAGACAAGAAATTCAACTTCGGTAGCATTGATATTAATG TTGATGAAGGTTTTCTTAGCAATGATTTTGCAACTCAGGTTTCCTTTAAA AAGCGTAGAAAATCCTCTATTACGATGATGAAATTTCACGGTGAATGTGT TTTAGAGGCGCCCAAGATTGCAAGACTTATCGGCTCATCAGAACAATGTA AGAATGAGATCCTAATGTATGGTAACACAGTACTGACCACGCAAGGTCAT CCAGAGTATACCAAAAATGTAATGGCGTTAACAAACTCTAAGATCATGTC ACGCATCGGGCGTCTCGATGAAGATGAAATCAAACAGAATCTTGATCAGA TTGTAAATGATGATGCGGAGAATTGTACTGACATGGTGAACGCATTTCTT CACCACATGCCGTTATCTATTAATGATCGAATGTCAAATCTAGCAATCAC TGGTAAGAACCAGAAGAAGAATGCGACATCCAAACGAGCAATGTTCAAAC GTACGGAAACAATTGCTGCATGATTGATAacttaatttgaaaaatgacaa tTATGAATTAATCTTAAAGTTGATATTTAATTGTATAGATAGCACAGATA TCTCCACGCAGACAAACTTTCAATCGTCTTCGTTATCACGGGAGTTAAGG TCTAGCCGAAGAAGCGGTGATTCGAACCAAAAAGTGACCCATTGGTCTTC AATATATCCACTAACTTTTTACCCTGGAGCCGATAAATTTTCCACTCACT TTAGATTTTGTTCTCCcctgaatgaaaaagttacacCGGTTACTAGGACA TTTAATGTGTTTAACCTATTTATATGACAGAAATATGTATGATGGATACA GAAGCCAGGGGTCGAAAAATATACAAACTTAGGATTTTgacttttcgttt tttttttgcataagtACTTGTTTTAGGTTTTAACTTCTTTCGAAAATATG TaggtcaaaactttttttactaGTAGTAGTGCTGCGATATTTAAGGGGTG GTTTTATTTTAAGCAGCTTTACATGAGTTTGTTTAGTTATAGCTTAGCGC AtattgaaatttcttttctaAATTTAGCGAATTTTTGAGCTATTTTGTAC TCTTTTTGCTACCTTTGTACATAGCTAAACGCTAGCTTAAGAGACTTTTT ATATAgctaaatttcttaaaatttatcTTCTAAGTTTTGTTTGAAAGGTT GTAAGTAGAACTGACAACtgttaaaaaagggaaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00021494TCONS_00021494Clytia hemisphaericatranscript
TCONS_00021495TCONS_00021495Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00021495-proteinTCONS_00021495-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000388supercontigsc0000388:182671..187804 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.81 0.93 0.41 0.28 1.29 0.94 0.42 0.59 2.06 1.38 1.6 2.06 15.4 12.57 8.99 6.23 23.16 4.65 37.36 40.28 49.9 46.77 29.56 43.51 22.27 17 167.14 140.72 3.33 4.59