XLOC_012048 (gene) - C. hemisphaerica

Overview
NameXLOC_012048
Unique NameXLOC_012048
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000388:8122..19334+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012048 ID=XLOC_012048|Name=XLOC_012048|organism=Clytia hemisphaerica|type=gene|length=11213bp|location=Sequence derived from alignment at sc0000388:8122..19334+ (Clytia hemisphaerica)
TCAATTTTGACGTTTATCCTTTGATATCTCGAGATCCTTTTGTTTTAGGG AATAGAAAACCAAATCACCTTGTCAGAGCACTGCACTATGGGTAATGGCG CAAGTGCTTCTGGGGTGGAGTCCTCACAAACAACCATATCTCTTGACGGT GGTGAAAAAATCGAAACAGCTCGTTTGAAATTGTTATACCCAGAAATCCG TGCGGAACTGAAACAAAAAGATGAATtggttcaaaaacaaaacaaacaga tCAAAACATACGAGGATGAAATAAAGAACTTAAAACGTGAGATCAACCAA CTAAAAAGCGTTCTCGAAGCCACTACAACAAAAAGTATACAAGAAGAAAC TATCCTGGAAGAATCCGATTCAGCCGATCAGGGGAAATCCAAAAACCGAT TTCTAGATGTTGTTAATAATGTAAGGAATAAAAGGATCGCTATTTCAGCA GAAACAAGTGATAAGAAAACGGATGTGGATTTAGCCAATGTGACTAAAAC ACCAAAAAGTGCTGAGGCGAGGAAATTGATCATGAAAGCTTTCCAAGGAA ACCAATTCCTTAAGCACCTTGAGGATGGCCAAGTGAAAGAAATTGTGATG TATATGCATTTGATCAATTATAAGGAAGGCGACTATCTTATCAAGGAGGG TGATTCTGGCAACGCCCTTTTTGTAATCAATAAAGGAAAACTACAAGTAC ACCAAGGTGACAAAGTCCTTGGCAGCCCAATGCAGCCTGGAATCCTTTTT GGAGAGTTAGCTATCTTATACGATTGCACGCGTACCGCTTCAGTTAAAGC GCTTGAAGATGTTGAAGTATGGAGTATAGAGAGACAAGTCTTCCAGTCTG TAATGAAGAGAACTGGCAACTTGAGGCGTGACGAACATTATCAATTCTTG AAAAGTGCACCCATATTCAGTGGGCTGGATACGGAGAAACTGTACAAGAT TACAGAAGTATGCGAGGAGGAGAGCTTCCAAGAAGGAGAGTACATCATCC GCGAAGGAGAGCGTGGTGATTCTTTCTTCATTCTCAAAGAAGGTATGCGT TATATTCTTTCTCGTTTGTTTTCGTTTTCAGGGCTAATTTTAATatgttg attttcattttgtttattgGGGTTTTTTTGCATGTATTGACATTAAACGT GGTGGTGTAGCCTTTATTTCCATAACCGTGTCTCTACATGTCTAAGTTTA AGTTGATGATTTTTATATATTGTAATATATACGTAAATCATCAACTTAGA TTCTACATTTGACTCAACGGATTGCTGTTCTAGCATATACAAATGCTTGT TAACATGGCCTGATTTGTCCGAAACAGCGAGTCGTCAAACCTCTTAAACC TCTTAAACCTTTCACACgttctaaaaatagaaagacattttgttaaaagt agtcgcaaatttacaaattaaaattttttacaaaaagaaagcTCAGCCAG GGTTTCCTGCAAAATTTTAATCCACTTTATGTCAAATTTACACAGTTACA TAAgggccaaatagaaaatttttaccGGGCTTTACATGGGTTTTAAGTCG CGTTAAAAGGTTAAGCTTTTTTCCTGTATATTAAAAAATGAGAGGTCATT CTACCCTTAAAGACCGCCCATCCATGCGTTGATACCAATAAGTTAAAGTA AACCACCATTACCTCTTTTTGAAGAAAGACCTGAAAAGTCTTCAAAGGTT TTCCTGTAGAGAAAGATTGAATGATTCCAAACGAAACTTTATTTCggaca aaacaattttttttacaaagcaaAGGTTGCTTCGTGAATTTTAGAATCAA TTATAAAAAGTTCCCAGAACAAAGAGACGTGCTGTTAGAGAACTGGTTAT CGACACCTTGTGTAGTAGAACTGGTTTAATACTCAGTCGCTTGAATTTCA ATATCCAAAAGCTGCATCGTAAgaacaaaattttgagaaaaattaatcgc attaaaatattatttaaaaaattaaagtcaGCCTAAAGACATAGCGCTTT AAAGAAGTTTAAATGATTGATAACAAAATTTCTTAAActtgaaataattt caaagtttttcacaAGAAGAGTTGATAAAAATTTAGCTATTTTCTTCTGT AGAGAGCCTTGAAACATTTGAAAGGCTTGATACAGACAGATTATGGTTGT TTTTAGTGAATATTTTTCTTGGGTGATTGAGAAAcatgttgttttgttta tttatcaCAATTACGAGAGAATCCAAAGTAAGGAATCCTTTCATTTAGTT TGTTTGATGTtgttttgacgttcgattgacgTCCATAGGTTATGGTCATT CTGTTATGCAATCACTGTAAGTCCGCATTACTGCACTTGGGTTTACCAGA GGTAGATCACAGTTAACTTATTTGTTGGTTATAATCGTTGCATTAGAATT ATCACATTTCTCATTTAAGTGTAACCTTATTCGTGAGTTATTTTTATGGA GAACGGGATGAAACATTGAGTACTTTCAGTTGCCCAATAATTGTCAACGC AAGCTTGTCCCGTTTATTTATCTTTGATTTCGGTTTATAGTATTTTGGGA TATTCGGAAGTGCAATATCTGTTCCATCCCCTTGTTGACAAAAATTTGAA CGTTTCAACTACGAAGTCTCCCTTTTCAGCCGAGCAAGCTCAATGCTAAT ACTTTTTACTCTTTGAAATAGCCGTTGCTTAGGAAGCAAAATCATAACGT GTCAAGTAGAGTGGAGCTTGCTTGGCTACTCTTTTCTCGGCCCCTTTTAA TTCAGATCTTAGAAGTACTCTTCGCTGTTTGTTGTTGTGACATGTGCCGC TATAAGTATTCTAAAAGTAGCGACTAGAAGCTGGTAGAGTTATTTCTAAA AGGTTAGATAAGGTGTCACaactttttgcagaaaaaataaattttgagtt cGTTTAAAGTCCGTCGATTTCATAATACTGATATTATAATTGAAACGTAT TATAAAAAAGcgttaatttgttttgatttttgtacaGGGATCATCCCTAA AAGCGTTAAAAGATCTGTAAACATTTTTTGATAGTGATTTGTACGCATCT CTAGAACTCTCAAAATTCCGTTCTATGTTCAACAGCGGAAGGAAACGACG TTAAAGGAAGTTGAAAGCTTCCTGTAAACTCGTTAAAAATAGTAAAGCGC TCATTTTGTTAAATCAAAAGCATACTTCAGCTGAAAGTCTCACAAGAAAA TGGTTCATAGGCTTtaaatttgaagtttttataacaacttttaaatttgt taacaaaattttcatttcataatgGCCTTAAGACCATTAAACACAGTGTA ATCTAAAAATTTCAAGACCAAAATGGAATAAGCTCGTTCAAACTTTCAAT AAGTCTCCATTTCAATTACGAAACTTTCGTTAAAGCGTGAGGATTGTGTC TTTTCTTTACGTAATTACGGCATAAGTTTTTGAAACAACAACCTTTGAAG TCTTAGTGGTTAcgaaaaacgtaaagaaataGAATTTTAAGCACGCTAAC ACGACACGATGTTTTacgcaacaaaattttcaaatttaaaaagaatttaa aaagtgTGTCTTTATATAAGCTAACACGTGAAAGCATAACTGGTATtatg aaaatcactgattttaaCCGTACAGAAATTTTTGGCCTTGAAAGAGTGTA GCTAATATAGAACGAACAACAATCTCATTTAACGTTGTGACTGATTACGT AGAGATTCAATCAAATGCTGTAAATAAGCCAACCAAACCAAACAGTAGCG AGCAcatcaccaaaaaccgggatttttcattttgtatctTGGTGAATTtt actttgatgattttcgagAAAtggaagcctttcaagtgtattgacgcaaa ttcgattttattGCTTCTGTtaaggccggtttccacttgcgcgcgctgtg atcgcactttttgacttcaatccttttttcttggaaaaaaagattacgtc ataaaaatgtagcgcgctggaaaaaaagttgaacacatttcaactttttt caaccgctacgtcagatcgcgccaatggagttgcttcatttttcttttgg ccaatagcgtggaagctttgctcgaaaataTGTGATTGAAGCgcacgcaa gtggagaccggcctttagtcTGAATCACACCTCTACAAAATCGCAGGTAG TATaaagcacgaatccgttagtggaagGCAGCAGCCTATGCTTCTGTAGG agctttgaaggtttaaagtgaCGTCTCGAATGGTTGGAACCCGAAAACCT AAActtcaaacattcaaaaaagtCGCAAAATGGAATAAGTTCTTTTTCAC TNACGtctcgaatgtttggagcccgaaaatCTAAACTTGAAACATTCAAA AAAGTCGCAAAATAGAATAAGTAGATATTACTGCGTAGAAAAAagccgtg acgtctagtatatgCTTTGCAAACAGTTTTTCTTGGTTTTTGGAAAGCTT AGGACCGTTATTTCCTACCCTCCTGAGGTGGACGTCATTAAAAGTACGTG AGATATCAGAACAGTGAAAAAGAAACACTAAATCAAAATGATTATGTACT CAAAAAGACTTAACACATTGACTAAACGCCTCTTAGGAGGTATAATCTTG TATAAAACTTAAAACATTATTCATTTTCGTCACAAATAAAGAATGACCTT ATTGTCTTTTTGCGTAATGAGAATCATATAAGCCAATGACGCAACGTCTT ATATTCGTGTTGTCATTACACCCATATAACGGGACCTAAATTTAAAGAAA GGACAATACCTTTAAAAACTACTCATGAGATTACATCGGATTTTATGACG CACGCTCCGCTAGTTTATATCCAGAGGTCTTGTAATATTTTAGTTCAGTC CTTATAATTAATTCAACGAGTGAAGTAagattttgaaattgattttttca tattctttCCTTTTGATCAGGCATGGTGAAAGTTTTGAAGTTGCTTGAAG GACACACTGAACCACAAGAGATTCGCACGCTCAACAAAGGTGATTATTTC GGTGAAAAGGCTCTACTGAGTGAAGACCTAAGAACAGCAAGTATCATCGC ACTAGCGGGAGGCGTCAACTGTTTAGTTATCGAACGCGAGAACTTTTTAA GCTTTATCGGTGATCTTGATAGCATCAAAGAAAAAGATTACGGTGATTTG GAACGGAAGGCGGCCGCCCAACTCAGCAAGAAAACATCATCTGAGTCGAC GGTAAGCCAGAAAAGCACATCATCGCAACCACCCAAAGAAAAACATAGAA CGTCAACAGAAATAATACGCGCAGAATTCGAAACTAAACGCCTTAGTGCA TTCAAGTTACTCTCCACCCTCGGTATGGGCGGATTCGGGCGTGTTGAACT GATCCAggataaagaaaacaaaagcaaaacgTACGCCCTTAAATGTTTGA TAAAACAACACGTGgtagaaacaaaacaacaagaacacgtcttcaacgag aaaaaaatcttaatGTCACTCGACTCACCTTTCATTATAAACCTTTACAA AACATTCAAAGATAAACGTTTCGTGTATTTCCTCATGGAGGTATGCCTAG GAGGTGAATTATGGACCATTTTGCGAGATAAAGACTATTTCGACGAACCT ACCAGTCGTTTCTATACAGCCTGTGTTGTTGAAGCTTTCGAATATTTACA CGCTCGTGGTATCGTATTTAGAGATTTAAAGCCAGAAAATCTATTACTTG ATAATAGAGGTTACGTCAAACTGGTTGATTTCGGTTTCGCTAAGAAGATC AAGTCGGGTACAAAGACATGGACATTTTGTGGAACACCCGAATATGTTGC TCCGGAGATTATCTTAAACAAAGGACATGATTGTTCGGCAGATTATTGGT CATTAGGTGTACTGATATACGAATTGATGACTGGCAATCCACCCTTCACA AGCTCAGATCCAATGAACACTTATAACATTATTTTAAGAGGTATCGATGC TTTAGAATTCTCTTCGCTTATATCAAGGAACGCTCAACTGCTTATTAAAA GACTTTGTAAAGAAAATCCAATGGAGCGCCTTGGTAACCAAAAAGATGGT GTAATGGATATACGAAAACATAAATGGTTTACAGGCTTTCATTGGAGTGG ATTACAGGCTAGGACATTGCAAGCGCCGATTATGCCGAAAATCAAAGACG CATCTGATCATTcgaattttgattatttctcACCTAATAAAGATATACCA CCTGAAGAAAATTCGGGTTGGGATTCCGAGTTTTAGTTTCTTTTTTCGGG TTAATTCGGAGTTAGTTTGAGTTCAAGAACgtgttaaagtaaaattttct gcTTTCGATTTTGTATCAATTCGTATCCTGTTTACTTTACTGAGAAGAGG TTTTAAGTCAGGAATTTAACTTTAATCCGTTCTATGAACTCTGAGAAACA ATTTAATTTATCGGTTTTTTACTGTTGCTAGTTTGATTTCGAATGGTAGA TTTTCATAGCGAGCtgcttttatcaaaatttaaagaGTATGTGATCGGAA TAATTTTTATCAGGCTTGAATGGTGATATAGAATTTTCGTTTTCTGGAAG GTTCGATATACATTCCGAGTAACACGGGTAAATTCATTCGCGttttaagt ttattttcaatTGTTGGGTTTCAATCtatttgtataatttttttttaaac gaaATTCATAGGATTTATAATTGTTATCATTCGGTGCTTTTAGAATCAAA TTTGAACGATtttattttctaatattttctctttcacATATTCACAATGT TCACAATAACTGAAAAGCTAGTTCAAGTATTCAACTTTTTTCCTGATACT GTAAGAGAAAAGATTGTCTTTGATTTGCAAGTGAATCCTCTCTAGCCTTT TTAGCTTTATAtatatttcacctttcaaactCTCAAGAACGGTCAGAAAA GAGTTTAAAATCCTCATATTTTGCAAGATTTAACTTTGTAAAATAGCGAC CGAGGAACAGTACGCATATATACACATTAACATAACAGATAACAtatatt ttattacaaactATTTTTGATGTAAATAATGAACttgctttgtaaaaaga tattgtaaaaattcaatataaGAACACCCAGGGCTCACATTTGGAATGAT TACAATTGATGAACGCCCTGGGTTTCAACttattaaaaaattcaaaaaag ggaaaaagtcatttaaacaatttttctgCCGTTTTAaattattatccgac gcgcgtaaatagcgacatttgattggcttctttgctgtccaatattttcg aatatatagcttccatggaggctacatatttcaNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNtgacgtcacacaacgagttcaatgacaattgagcat cttctttttgacgttacgtcacaaaataaaaataagacttttgaataaaa aactaacaagaaatcacaaaaaagagcatttaaattggaattatgtttga aaacgagaaatattttagcaatgaacggataataaaccatttatttggac gcagtctcatccaatatgaaaaatattgggctacgagaaaagatattgga ctcgGCGAACCCTCGTCtaatatcttttctcgcacgcctaatatttttgc atattggattcgactttgtccaataactgcttaatagtttgctcttataa aaaatacatataatcaaaattttatgattGGAACATCtcttttctcacag acccactgggacagaccccttcccactggaaaaattggtcaaaatattgt ccccagtgGAAGATTATCCGCCAATTTattccccattgaaaataatcaaa taaaccaatcctcactgcaaaatatctactatttttcccatccccactga attttttgacttgaaaacaaaagaattgaaatcgaTCCCTAGCCTTAAAA AAATTTacgagttttagtccgttatttttatccccactggttgAAAAATT CCACCGGGTGTTTTTCTACATCCCGTTAAGTTTTGCAAAGTCATGAAAGT GAATTTCCTAACTCATTTGAATGTtaacaaaaaaagatatttttgtaTAT TGGATTCggctttgtccaataactgcttattGTAGATGACGACAACAGGA CGACAATCAAATTTGCCATTGCACACAAGTGAACTTCAGATTTCTATGAT CACACCTCGACAAAGCCAAACAGGCAGTTGCTTACTgatcacgaatatct ttttcgaacaaaaattttATGATCTCTAAAATGCTaattctgtttttctt tttcttttgtctaatcattgaaatttaaaatgtaaaatttatttgacgtc agtttttatCAAATAGAAACTTTTCATCacgaagaaaagaaaattatttt tcctacCACTCAAACCAAAAATGACAATGGCAAAAAGTCTCTATACATAG GGACTTTTTCTTAACCCTTATTTCCTCAACTATTAGGAATGGGTAATCTA CTTGCGAAATTTACGTCTTCCAAGATTCAGCCATCCCTGCTAGACATTGA TGTTCAATCTGGCTCGACGGAGCTGCACAACGACGCCGACAATGTGGTTC CAGATTTAAGTTCTCAAAGTAATTCGACTCTTTCTTCGGTCTCGTCTGGG GACACTCAACAAGACGGAGCCGTACCTGGGCCTAGTAGCGACAAAAGAAT TGTCAGGAAAAATCTATCCATTGTTTCGTTAATTTCATCCGAATCCGAAA CTTCCATTATAAATCattacaaacaaaaacaaaaccttttagaGCCTGGT GAGCCGGTTAGTATGACTGATATATCAAAAATACATGGTACTGGCAATTC TAGCGGCCAAGCCGATAACGTAGTCAATACCGACCGGTCAATAGAAACAG AACAAGAGAGGTTGATCCGTGAAGAACAAGAGAGGTTGGAAAgagaacaa caacaacaaagggCCAAAACAGCTCGCATGAAACGAAGGTAAAGTTGCCA ACATGATTTTTTGTATTACACAAAATTTATTAGTCATGCTATTATTGTGA ATTAACCCAAGTTATGACCGTTTAACAAAATTTACGCCATCGTAATTTCC AAAAAACACTGCCTTTCGCGTTAATAAATTGTCTTACTGTTTTTACCCGT ATCAAATACTTGAGTAGTTGAATAACTTTAATAAGGTAGGTTTTTTTGAC TACTGACACCCTGTCATGCGGTCCCGGTAGAAAGTTTTCCCTCAGTTGTG ATAAAAACTTcgattgaaatcccaatggtgATAGATATTCCAATCCtgaa aatatcttgaaaatatgatatttccatatactgtacatttgtaaatattg tggaaatattttgaaaatatggatGTTTCAGATTTAAGTGTTAATACTTG TTCGGGAACTTTAATCAAATGACAGCATTATAGAGtgtagactggcacgc cagtcgggctggaacggtatcacgcgggaaaagtgagcgtaggagttagg taagcgtaggaagaaattttgtaggcggcaagggctgaaatctgttaatc agcagcctctcgcaaacttttgctcgttctcctacgcagctcctattcta gcaaacgcccgccgcctttatgttcccgccctctgacatgattaattaac agactagtttgctagtctatatAGAGTGTTAGTCTTTGTTTTTGACCTAC AACTTTTTGGCAATGTTTGTTAGAACTTTTACTGAACTTGACAAATGACA TgttttaaagctttataagcgtCTTATTTGAAAACTGGTCGTCCTTGGTA AAAAAACAATGGAATCATTAAGTAAAAGTCGAGATTTAAATTTCACGGCC ATTGATTGGCAGGAAGAAAAAGTGTCTAAAAATTGACATATGATAGGTAA AGCCCTTTTTAAGACACAAATAAAGTGTTAAGACGTTCTTAAGTCTCCCG TAAGGACTTCCTACTTTTTGGTCACGAGTATTTGGGAagtcttgaaattt tttgataaccCAAACCACTAACTCctccttttccaagctattaaATAACT CTcccttaaattttgaaattttgatttttgactagGTGAATTAAACTCTG AACTATAAATTATGTTTTAACTTTCAGAGAGAATTGAAACTTTAATTCTA CTAGCAATTGTTATTTTAGTAACTTATCAACTTAAGTCTTCTAAAAGATG CCAAATAATACCTGGACTTACAAATGTTTAAGGTCACGTACTGTTCAAAC AATGAGAACAAAACTTGATGACAAAGTTTCTTTATATTTAGTGTAAAAGT GTAAAATACCTtccaataaaaatataaatgaacTAGACCTACGACCAAGG TAGTGGATTGTGTCACTTCAGTGAGCACCCCTTAAACATGGAAAAATCTT TATATTATGATCCTAATAGGGTGTATCGATAAAGAAATTTAGTTTTTGTA GTTTTTGAGTTAATCGATTTTGAGTTACTCGGTAGAATTTATCCAGGGtc cttgaaaatcaaatatttgatgctaccaacggattcagcaggtaaagtaa ataaagaataagaagaaagtcacgaaaaatatttgtcGGTATCAAAATTC GGCTCGCTGCCTCAATTACATACTAGCCAACGAATACACTAGGATGGCTA AGAATTCGCCGGCTAAGGATCTAGAATTCGTAAATTTTTTATACTCGCTT Aagcctatcaaaaacaaaagaaccccctggaaatggcctttttttaggca aaaaataaGCCTTCACCAGTTCTTATATCCTCACTATTTTTTTACTCACC AGCAACAATCTCCGCCTATCCAAACTatactaaaaataattttttttcta gaatgaaaatcctttgtaaagAATCATAAGCTATTCCGTTTCTGATTCGA ATTAAAATTCCTTAACCATAAAATCCGTTTCTTTACAGATGTGAGCTTTA CGGTGGGTCCAGAGCTGATATTTCCAAAGGTGATAACAGTATCAAGCTTG CCGAAAGTGTTCTTCATCTTATTCATCAAAATGCTGAgtcaacaaaaatt tcttcttcaaCATCAAAGATGCAGAATTATCTTGCTACCACCAAACCACC TCCGACGCCCAATTTTCCTCATCGACTAAAAGATTTTGGTCTGAAATCGA GCCTTGATGAGCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00021482TCONS_00021482Clytia hemisphaericatranscript
TCONS_00021483TCONS_00021483Clytia hemisphaericatranscript
TCONS_00021484TCONS_00021484Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00021482-proteinTCONS_00021482-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000388supercontigsc0000388:8122..19334 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PRKG2PREDICTED: cGMP-dependent protein kinase 2 isoform X2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.56 0.68 0.07 2 2.46 1.26 0.4 0.98 1.33 2.15 1.45 1.29 5.88 5.03 0.61 0.44 3.6 4.76 10.68 10.63 3.36 4.09 2.44 1.72 4.62 3.05 0.84 0.06 1.31 0.67