XLOC_011299 (gene) - C. hemisphaerica

Overview
NameXLOC_011299
Unique NameXLOC_011299
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000349:67374..71175+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011299 ID=XLOC_011299|Name=XLOC_011299|organism=Clytia hemisphaerica|type=gene|length=3802bp|location=Sequence derived from alignment at sc0000349:67374..71175+ (Clytia hemisphaerica)
cagACAATCAACAACAAATGTTGCAACAAATGATCAgccagcaacaacaa
caacaacaacaacaacgttCCATGCAGCAAAACAATCCACAACAACAGCA
AGCTGGCAATGACATGCAGAATATGAGTAAGGNCAACAAGTTGCACCGAA
CGTGAGTGTTGTTATACTTTACTTACTACTAAAGTGTTTTTATACTCCTT
GACATTTTATTGACTTTATAATAAATGATGGTCATTTTGTTCAGCTAAAG
TTTTGCGAAAAAGGAAGTCTTACTCACTTGTCCGTCCAGTTTCACTGCga
tatttttttacaagaactttATTTCCCAGCCTACACCACATGTCACAACC
CTTTTCCTACATCtgttccactttgcgactttctCAGATGTTTGGAGTCA
AAGTTTtccgggctctaaacattcgaaaaaactTGTCATCAAAACTTAAC
TTCTGCTTAAATAGTGGATGGACTATACCTTCTAATTATTCTTGAAACAA
ATTTTCANCAGTTTTGTTACCTCATACTCACAAATagtgaaatttgattg
gttcctTTTATGTATTGTCCGATGGCTAGTGATTCATATAACATAGTTGT
TTCAAGGACTACCTTTCCAAATATCTCCCAAAAGAATTTCTGTTCCAAAA
GAAAGGCCCGTTCTCGAATTTACCacataattcatgatatgcaccactgc
aatgtcttctgacatcacatcacagacccaatagctgattggttgtaagt
gacgtaaaataagtcaataagccactttcaaccaatcagctgttgtgtcc
gtggaagacattgcaatggttaTGAATTGACGCCGTTCCATCCTAGTAAA
CTCAAACCCATTCCCCTTGTAGTAAAGTTTATAATTAGAGTCAACTCACT
CTAagtcgaacctctattattcgaacctTTCTGTAAAAAGAACTAAAATG
TTGGTCCCCTTAGCTGGAAaatggtttaaattactctctgtaattcgaat
ctttctataattcaaagaaaatcccatgaagatcgaattagagggaGTCA
ACTGTACTTCATCGTGGCTTGAAGCACGAGTTTTGCGTAAGAccaaaggt
aaaaaaaaacttttgagcaAAGCCACGGTAAACTCCCAATATGAATGTGA
GTTGGTCGGTAACTTANCTCCACCCCAAATCTCttccatttcattttatt
ttttctcattcAGACAATCAACAACAAATGTTGCAACAAATGATCAgcca
gcaacaacaacaacaacaacgttCCATGCAGCAAAACAATCCACAACAAC
AGCAAGCTGGCAATGACATGCAGAATATGAGTAAGAACTGTCACAGTTTT
GTTACCTCATACTCACAAATagtgaaatttgattggttcctTTTATGTAT
TGTCCGATGGCTAGTGATTCATATAACATAGTTGTTTCAAGGACTACCTT
TCCAAATATCTCCCAAAAGAATTTCTGTTCCAAAAGAAAGGCCCGTTCTC
GAATTTACCacataattcatgatatgcaccactgcaatgtcttctgacat
cacatcacagacccaatagctgattggttgtaagtgacgtaaaataagtc
aataagccactttcaaccaatcagctgttgtgtccgtggaagacattgca
atggttaTGAATTGACGCCGTTCCATCCTAGTAAACTCAAACCCATTCCC
CTTGTAGTAAAGTTTATAATTAGAGTCAACTCACTCTAagtcgaacctct
attattcgaacctTTCTGTAAAAAGAACTAAAATGTTGGTCCCCTTAGCT
GGAAaatggtttaaattactctctgtaattcgaatctttctataattcaa
agaaaatcccatgaagatcgaattagagggaGTCAACTGTACTTCATCGT
GGCTTGAAGCACGAGTTTTGCGTAAGAccaaaggtaaaaaaaaacttttg
agcaAAGCCACGGTAAACTCCCAATATGAATGTGAGTTGGTCGGTAACTT
ATttactttaaactttttgaaaaactctTTATTACACATTCCTTCGTTAC
CATAACAACCATAGGGAATAACATGATGCAACAACGACCCAACAACTTTC
CACCTTCCATACAACAGTTGAACAACAGTAACATTCAATTACAACAACAG
TTACAACGAAGTCGTCAACAACAATTCCTTCAACAACATATCAAAAACCG
TAAATTCCCAATTCCCATTTCCCCTCCTTTCCCAGTTTGCCAGTTCCCAA
TTTTCCCCCTAAATTCCTTTTATCATTTTCCCGTTTCCCCTCGCACCCTA
GTTCTTGCGTTTCGTACATCCAATCGAATCTTTAAACTCCCTTGTTTATG
AGCACCTCCAATGTGATATGTCTGAAAACCCCTCTGATCGATCATATACT
CCCAAACTCTCTGCTTGACACACTTCTACCTTACCAAAAAATCTCTCAAC
CCGGCATCCTTGAAACTACAGATAAACTCCCCGATGCATTTTGTTGACGG
ATAATAGTGACAAACCTGACTTATAAAATGATGCTCTCAAAGGCAAGAAT
ACAAAAGGACTTTGAAACTAATGCCCAATCCTTTTTCTCACCTACAGGTA
TGAATGCATCGAATATGCAACGCCAATTATCATCAGGTAGCAATGCTTCA
AATAGTTCGGGCGGTGGTGCTCCCATGATGGCCGGAAATGATTTCACGAA
CCAGCAACAGGGTGGTAACAATATGATGAATAActtccaacaacaacaac
aacaacaacaaaacccTCAACAAATACAAATGATGCAACAACAATTTAAC
CAGCAACAACAAAATACTAATAATAATCAATTCAACCCTGGCGGACAAAA
CCCTTTCTCAATGTAAAACTGTTCAAGGAAATAATTGCTGTCGTTCATGA
TGTATATGGTAATAGATGGCTTGATAACAGCTATCGTTGTTCGGAAAATA
AGAGTCCCTTTTCCACAAAATGACTATTTTACTTAAGCTTTCTCATTGTG
AAGCTTTTGTCGACAAGGGACATTTACTGGCATTGTACTGTTCGATGTTC
AAGCTCTTGGAGATTAATGACCCACAATCGGACCACATCTGAGGCGGTGT
TACTCATTGGTGGAAACCCCGTTATACGCCCCGTTTTACGCCCCAGCAAC
GAGTTTCCACTTCTTTGCTCGAGCAACCCGCTCCGCAATTAATCGTAGTA
ATGCTTTATGGAGGTAAAGCTTTTGTTAACGACACAATAACTTTAATAGA
TAATTAATTCCTGTCTGGAAAACATAATTCAGAATTCTGTTTGCGACAGA
CCATGCGAGGAGAGTATCTAATGTGATTGTGAGACTAAATACCCCTTTGT
AAGTAGTGGTTTCATAAGATAATACGATATATCGACACGATTTATTTTGT
ATTTAGACTAGTGAATTTTGGCGGAGCCTCATCTATTTATCAACAATCTC
TCAAAATTGAGCCTCAGATTATATTTTAAAAGCTCTGGAAGTTGCTATGT
ATTATCAAAAAGGAATGCAGTTCCTGTTTTTAGTCTAAGCATACGCTCAT
AATTTGATGGggtgagatggagtttttacaagctcttatttgatttggtt
ggtcgttaaccagtaataaaacaattttgttactttttctaaagagcgcg
tcatttttattacttctattacttcaaatgaccaattattaaagtatctt
ataaaaactccatctcatctgaattTGATGGGCCAGTCAAACGGTTTCAG
TTTTAAAAGGTAGATTCTTCTTGGAATATGGTAAAGTTATTTGCTTAGAT
TT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020102TCONS_00020102Clytia hemisphaericatranscript
TCONS_00020103TCONS_00020103Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020103-proteinTCONS_00020103-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000349supercontigsc0000349:67374..71175 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
17.14	14.44	7.25	5.64	20.51	15.64	15.84	19.92	10.44	11.1	11.85	9.51	10.12	14.97	9.43	11.41	9.46	12.05	11.84	12.62	13.37	12.14	14.3	13.86	17.19	19.37	8.02	9	14.96	15.26