XLOC_010372 (gene) - C. hemisphaerica

Overview
NameXLOC_010372
Unique NameXLOC_010372
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000301:148221..152332+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010372 ID=XLOC_010372|Name=XLOC_010372|organism=Clytia hemisphaerica|type=gene|length=4112bp|location=Sequence derived from alignment at sc0000301:148221..152332+ (Clytia hemisphaerica)
TGTTACTGGTCCAAACATAACAATATATGACAAGTTCTCCTTCACTGAAA
TGACGTTGAATTGGTCGACTTTATCGTATGCAGATTCACAGGGGACAGTT
TTGGATTATAACATCATTTATTATCCAGTCAGAAGGAATGGTATTGATCT
AGCTCCCGTTGATCAGGTAAAGGTCATTTTTTGTGACGGTGGCAAATTGT
TGTTCTACGGATCAAACTCAACATGAAATGGTAGCAATAATGACAAATTT
ATAAAAGCAAGATTATAACAAGATAATAATATAGGGTAATATTAGGGTCA
GGTATCAAATTGCAACCTCAGAAGGTAGGAATTTTAGTGATGTGAGTTAT
GTTCTCATTTTCAGGATGTGACAAGCCTTTGGTTCGAATTTCCAACACAA
GGTGTCGAGCTTAACAATCTCGAACCTTTCGTCACTTACGCCTTCCAAAG
TGCTGCACAGACATTCGCTGGACCCGGAACTTTCTCAAAGCCTTTTTATG
CAGGTAATTTTTTCTACAATAGCTATTCCAATCAAATTTAAACAAGAACT
CGGAGTTGGAACTTCAAAGATCGAAATTCTCTTTGCCCAAAATAAAAAAG
GCTGTTATAGACaatgataaaatattggaaTGTTTTTTAATGAACTTTCT
CTCTCAAAATTACAAGGGTCGGCTTGTCGAAAATAGGCCTATTTTGCGCG
CCTTTTATTTTCGCGCACGTATTCTACGCGAAAATTAAAGGGGTGCGAAA
ATTATGAAACCTTCCTTTTTGATTTTCGTTTATTTATGTTTTGCTTGctc
atttctaaattttgccAGAAACCTGCCGTtgcgaaaaaaacttcaaagca
GTCTATCGAAATCACATGCCGTACTTCGGAATAGAAAACGGGGAACAAAT
CGGATTACTGAAGAACGTTGTAACCGAAGCAACCAATCTCTGTTGTGGAA
ATTGTTCGAATGGGCATGGGACCACAAATATCATCTGGGAAAGTCCCATG
ACGAGTGTCAGCGAGTTAAATGATGCCATTTTTGATGATACCGACTTCGT
GTTGCCAATAGAAACGGATAAAATAAACACATACTACAAAAGTAGACCGT
TTGTCGGGATTTTGGATAGCCCAGGAGTTTCCGTATTTTCGCTGAAAGTT
GAATATTTGAATTTGACGAATAATATGATTTTGAATGGAGTGTTGATTTT
GTGGTCTTTTGTGGTGATTGTTGCTTTAATAGTGATGGCTCTTGGATTGA
TCATGTGGATTGTCGTAAGtcgaagtttttgaaaatgtcctCGTTCTTTG
AATTATGTATGATGAGATACTTATTAAATTACTCTCATTGAGCCTGCTTA
AACCTGAAATCATTTCATTTTCTCTCTTCGTAGCAATGTCATCCACTTCA
ACTGAACCGAACGAATCAAGAAGCCTTCCCTGATACTTTTTCCCATGGCG
CTGGCGCTGGACTTTGGTGGGCTTTCAATACAGTTCTCCGTATTGGGCAA
GTCTTTAAATTACGCTTTTAAAGCCATTTCAAATAAGACGTTTACAAGAA
GTTTCTAAACGCCCAATCACGTCACTCTTACCATACAATTTTGAGCTTCG
TCAATTGCTAGGGAAATACCAAAtgattaaaaattgatttttcttccTAT
CTAGATACGGGGACATCGTTGCAACTGGAAAACTCGGTCGCATTTTTTCT
ATTCCAATAATCGCTGTAGGAATTGCAATAAGTGCTACATTAATTGCCGG
TGTTTCGTCCATCTTGTTGGCTTATTCTGTTCAAAAAACTGAAGGGAGCA
TCTTTTCAAAGAAAGTTGTAGCAATGAATGAATCTTATGATCAATTGGTC
ATCAAACGGATGGCTGGTATCATCTCAGAAAGTAAGTTCGTCCTCATGTA
GTCTGAATGGCAGACCCCCGGGTAGTAAGAGGCACGATAAGGAGCACCAA
TGCGTTAGTGGATGTCAGCAGCCTACCTCATGTGTATTTACAGTTTGTAA
TCTCCTGCTCtcttaaaatgtaattttgCTAACAATCATCCTTTGAAATT
TTCCCTCAATAGCGGCTGGTGACACAGTGGAATTGATTGAAGTTTTACGT
AGCAAACGTGTCGATAGAATGGCCGTTGATGCAATTTATGCTGCCTATCA
TTCCGAAAAGATGTCTGATCCTGACGTCATCTTCAGAGGTATCAAAGAAT
CAGGCGCTACTCAAGGCATTGTCTTCGGTGGCAGAGCTTTGAGATTGGAG
AAATGTTTTNGGCGATTGTTGCTTTAATAGTGATGGCTCTTGGATTGATC
ATGTGGATTGTCGTAAGtcgaagtttttgaaaatgtcctCGTTCTTTGAA
TTATGTATGATGAGATACTTATTAAATTACTCTCATTGAGCCTGCTTAAA
CCTGAAATCATTTCATTTTCTCTCTTCGTAGCAATGTCATCCACTTCAAC
TGAACCGAACGAATAAAGAAGCCTTCCCTGATACTTTTTCCCATGGCGCT
GGCGCTGGACTTTGGTGGGCTTTCAATACAGTTCTCCGTATTGGGCAAGT
TTTTAAATTACctttttaaagccattttaAATAAGACGTTTACAACAAGT
TTCTAAACGGCCAATCACGTCACACTTACCATACAATTTTAAGCTTCGTC
AATTGCGAGGGAAATACCAAATGattaaaaactgatttttcttcCTATCT
AGATACGGGGACATCGTTGCAACTGGAAAACTCGGTCGCATTTTTTCTAT
TCCAATAATCGCTGTAGGAATTGCAATAAGTGCTACATTAATTGCCGGTG
TTTCGTCCATCTTGTTGGCTTATTCTGTTCAAAAAACTGAAGGGAGCATC
TTTTCAAAGAAAGTTGTAGCAATGAATGAATCTTATGATCAATTGGTCAT
CAAACGGATGGCTGGTATCATCTCAGAAAGTAAGTTCGTCCTCATGTAGT
CTGAATGGCAGACCCCCGGGTAGTAAGAGGCACGATAAGGAGCACCAATG
CGTTAGTGGATGTCAGCAGCCTACCTCTTGTGTATTTACAGTTTGTAATC
TCCTGCTCtcttaaaatgtaattttgCTAACAATCATCCTTTGAAATTTT
CCCTCAATAGCGGCTGGTGACACAGTGGAATTGATTGAAGTTTTACGTAG
CAAACGTGTCGATAGAATGGCCGTTGATGCAATTTATGCTGCCTATCATT
CCGAAAAGATGTCTGATCCTGACGTCATCTTCAGAGGTATCAAAGAATCA
GGCGCTACTCAAGGCATTGTCTTCGGTGGCAGAGCTTTGAGATTGGAGAA
ATGTTTTAGGAAATATTTTCATGATAAAAAAGTGGAATTAATTGAACGAA
TAAAAGCTATCATCGATGCGGACAAACGGGTAAGACCATTTTAATCTCAA
TAAAAGAATTTGTATTCTCTTTATTAATAAGCCCTGGCGCATGGCAGTTT
TTTTCGATTAAGAATAACTAGTCGAaatattttatctattttataACATT
CAGAAATTGGAACAGCTTGAGTTATTCGTAGACTTTCATTGACTTTGGCT
ACCGAGAAAGCCGAGAAAGCCGTGATCAGGTAAATAATTCTCATTTCACA
ATTTATCTCGCTTCAGAATTATGCGGACAGCGAATTGTTGGACAAACGAA
ATGCGATGATANAAAGAAGCCTTCCCTGATACTTTTTCCCATGGCGCTGG
CGCTGGACTTTGGTGGGCTTTCAATACAGTTCTCCGTATTGGGCAAGTTT
TTAAATTACctttttaaagccattttaAATAAGACGTTTACAACAAGTTT
CTAAACGGCCAATCACGTCACACTTACCATACAATTTTAAGCTTCGTCAA
TTGCGAGGGAAATACCAAATGattaaaaactgatttttcttcCTATCTAG
ATACGGGGACATCGTTGCAACTGGAAAACTCGGTCGCATTTTTTCTATTC
CAATAATCGCTGTAGGAATTGCAATAAGTGCTACATTAATTGCCGGTGTT
TCGTCCATCTTGTTGGCTTATTCTGTTCAAAAAACTGAAGGGAGCATCTT
TTCAAAGAAAGTTGTAGCAATGAATGAATCTTATGATCAATTGGTCATCA
AACGGATGGCTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018497TCONS_00018497Clytia hemisphaericatranscript
TCONS_00018498TCONS_00018498Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00018497-proteinTCONS_00018497-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000301supercontigsc0000301:148221..152332 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.73	9.85	3.53	4.73	0.26	0.31	0.33	0.7	0.49	1.02	1.04	0.28	15.37	16.34	6.85	3.81	0.7	0.84	25.13	25.66	0.79	0.43	8.22	7.05	4.05	2.46	0.56	0.81	5.41	5.79