XLOC_010187 (gene) - C. hemisphaerica

Overview
NameXLOC_010187
Unique NameXLOC_010187
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000290:322447..332574-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010187 ID=XLOC_010187|Name=XLOC_010187|organism=Clytia hemisphaerica|type=gene|length=10128bp|location=Sequence derived from alignment at sc0000290:322447..332574- (Clytia hemisphaerica)
AGCAAGCATAACAAGCAAAGAGTAAATTGTGAAATACAAATTGCTAACAC
ATTCAAAGACAGAAGAAGATCAGTTAGTTTGAGCTCGTCAAAAGGTATTT
TTAACTTTTTTTAATCTTTGTCATCAGTTACATATTTTATTTAACATGTC
ATTGCAGGCATTTTTCTTCTTATAAAGTTTCAACCCTTTAATCATTTCAT
CCCTTAACAGAAATCACGAAAAGAAATCTGACCTTTTTATTTGATTTTTT
TTTCATTTTAGGAAAGCCATGAAGAGTCTGGCATTGTTATTGGTCATTGC
CATCATCGCCCAGTCACACGCACGTAAGTTGATGTCAGATTCATATACCG
GGTGTGCCACAAAAAAGTTTCACTTTAAAACTAGAAATCTAGAAATCTAA
ATTAAAAAAAAAACATTCCTATTTTATTGGAAAGAATAATGATAAACTAA
AATTTTGATGGGTTATTTATTAAATTCGATTCATTAGATCAAATCAAATT
ATGCTCAATTGAATAATAAAGTTACTTTCAGAAAGTGCTCGAAATGTTTG
TTTCTACTTCTTTTTATCCTTCAAAGTATATATTCGCATTACAAGAAAAA
TAAGTTTTTGAAATTATTTTCTTCCAGCTTACTGCTCATGAATTTTAGGG
AAAATATCTTTAAAAGTCCCTTCGTTGATCTAAAATCGAAACTGTCAAAA
GAATTATACACTGTTAAACACGATATCAGAAAATAATATCATTTCTATTT
AGGTACCTTACGAGGTGATTGCGAGGGAGTTCACTGTCAATACGGAGGGA
AGTGTAAGGAGCTCGTTTATGGCGGCTTTGAATGTAAATGCACAAGAGGA
TTCGCAGGAAAGTTCTGTGAGATCGACACTAACAAATGCAAAGGAGTCCA
TTGTCAATACGGAGGAACATGCAAAACTGTTGGNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGAATTGTGAAATCAAGACT
GACCGATGCAAAGGAGTCACATGTCGAAATGGAGGAAAATGCAAAACTGT
TGGCAACACCTACAAATGTGAATGCAAAAAAAGGATACGAAGGAAAGAAT
TGTGAAATCAAGACTGACCGATGCAAAGGAGTCACATGTCGAAATGGAGG
AAAATGTAAAACTGTTGGCAACACCTACAAATGTGAATGCAAAAAAGGAT
ACGAAGGAAAGAATTGTGAAATCAAGACTGACCGATGCAAAGGAGTCACA
TGTCAAAATGGAGGAAAATGCAAAACTGTTGGCAACACCTACAAATGTGA
ATGCAAAAAAGGATACGAAGGAAAGAATTGTGAAATCAAGACGGACCGAT
GCAAAGGAGTCACATGTCGAAATGGAGGAAGATGCAAAACTGTTGGCAAC
ACCTACAAATGTGAATGCAAAAAAGGATACGAAGGAAAGAATTGTGAAAT
CAAGACTGACCGATGCAAAGGAGCCCCTTGTCGAAATGGTGGAAAATGCA
AAACTGTTGGCAACACCTACAAATGTGAATGCAGAAAGGGATACGAAGGA
CAGCATTGTGAAATTGAAAATGACCGATGTAGAGGAATCGTTTGTCAAAA
TGGTGGAAAATGTAAAACTGTTGGAGACAGCTTCAAATGTAAATGCAGGA
GAGGATTTACTGGAAAGCATTGTGAAAACAGACCTTACTAACTTTTCAAA
GTTTAGTTTGGAATTTGCGGAAATGAAAATGGAATATGTTAAACGATTTT
ATTCAATTATCTTTTTATTTTAAGCTCTAATAATTCTTTTTTATTGGGTT
CTTTTAGCGGGGTTTTCAAAGTTTACTTTCTGAAATTTTAGGTTGATAGT
TAATCAATATAAGAATTTTCCAAGTTTCACAACGAGATGTTGTTGAATAA
GTTATTCGTGATTTGGATTAAAGTGAAATTCCTTTGATAGTGTTGGGACT
AATTTTTATATCAAAATAGGTATTTGATAATCTTATTATTTATCGTGATA
TTTATATAGTTTATAACATTTAAATTTTATTAGAAATTTCGGGAATTTTT
TTGCTCATTATTTTCTTTATTTAATACATTGCATGAATTGAAATTTTAAT
GAAGTGTTGTTAATTCTGCCAGATGATCTACAAAAGTAGCCGCAATATAT
ACTCTATTTGGAAGTTTCAATTTAAAATCCTGGAAATTTGCCTTCTTGTA
AGGCACAAATAATCATCTTTACTTAACGAAAATCCTGCACGTGGACAGTT
TTCTACGAATTTCTACGAAAGTTTAATGGCGTGTCTAAAGGAGCGATGGC
CAACTTAGGAGCGACGGCCGAACAGAGAGACCCAGAGAGAAGGTGTCAGC
GCTTCAAACCAGAGATTCGCGGTTCGAATCCTCACTCCTTCCAATGTTCT
GTTCAGTTCATAGATAGCCAAACTGGCTGGCCGTGGACCCCATGAAAACA
ATCGCAAGACTGCCTAAAAGTCCTAGATTACTTGGCTATCCACGTTAAAT
ATCGACTCTATCCATCTATAAATGGTTGAATTTGGATTCGAAGATGAATC
ATCATCTGTAGTAGAGCCCGAAAAATCATAACCATTTCTAGATACCAATT
GTTTGCTTATACCGTGTGCGCCACAAAAACAGTTTCTCTCTTTAAAACTA
ATTTTCCCGAAATTNCCGTGTGCGCCACAAAAACAGTTTCTCTCTTTAAA
ACTAACTTTCCCGAAATCTAAAAATTTTAAAAGACCCATTCCTATTCCAT
TGGAAAGAAGAAAGATAAACTTAAATTTTGATGGGTTATTTATTAAATTC
GGTTCATTAGATCGAAAGTTATACTCTATTGAATAAAAAAGTTACTTTTT
GAAAGTGCTCAAAAAGTGCTCATTGTTTTTTTATAAGCATAACTTTTATA
AGCATACTGAAGCGCAAATTTCCAGAAAAATTAAGCATTCGCTAAGCATA
CCTTTAGGCTCAGCCAAAGAATCATAATTTCCAAAACTTCAGAAAATAAC
AGAAGAATGAAGAAGAGAATTACAAACAAAATTCGAAAAATTTGTGATTT
TATTTTGTTTATTTTACACAACTTGGTCTCTTAAGAATGCACACTTTCTA
AACTTACATGTTTTTTACCAAGCATAGGGTTAAGCATAATTCGAGTCTCA
AAATTGAGCTTTACTTAAGCATAGTGAGCTTCAGCCGAAATACTGTATGC
TTAAAAAAAAATGAGTGTAACATGATGCATCAGTATTTTCGTTTCAGTCA
TTAAAAATGATAATTAGCTGTCTAAATGACCGTTTGTTATATAAAGGAAG
ATTGAATTTCAATGAAAGGCAGAAAATTCATCGAAAAAGCCAAAAAATCT
GGTAAAATTCTTAAAGATGTATCAAATATGGGTTTCGAGGTACATACAGC
CTTACATCAGGTCTAGAACCAAAAATCTGAGGAAAATTTCGTTAAAAGTA
AATTGAAATGATTTTGATGAACATTTTAAACCGTTTCGTTCCATCAGTTT
CAAAATTTATGTGTTTAATTACTGAAAATTGGTCTTAATCATTTAAAGCC
TCTTGAGATTGCCAATTTTAAAATAAAAATTTGATAGGTCGAGTTTTAAC
GTTTCCGGGCACTTTCTGAAAGTAACTTTTTTATTCGATTGAGCATAACT
TTTGATCTAATAAATCGAATTTATTGAATGACCCATCAAAATTTAAGTTT
ATCTTTCTTTTTTCTGATGGAATAGAAATAGTTGTTTCTTAATTCTTGGA
TTTCGAAAAAATCAGTTTCAAAGAGAGAAACTCTTTTGTGGCGCACCCGG
TATAATTGTGATTTTTACTCGGAATTTCAGCTTAATCATAGTTTAATTGT
TTCGAAATCCTTTGACGATACGACTTTGGTACGTTATGTGCTTCGGGCCT
GGCTACCCCTTTTTTTAAGTGTCTTTGATTTGTATGTTTTAAGGTACCTT
AAATGTTCATTCTTCGGACTTTTCGACACCCCTGTCTCAGCGCCCCGGTG
GAGCCTTTTTCCTCAGTGGGGATGGAAATTTCTATCGAAATCCCAACGGG
GATAGAAAATCTTTTCCAAAATTGTTTCCAGCTCAAAAATTCCAGTGGGG
ATGGTTTTGGAGTCCAATTTTTCCATTCAATTTTCAATGGGGATATGATC
ATAGGGCAACTTCCCAGTGGGGTTAAAAATGTAGGGTATTTTTTCCACCC
GGGACGATCNTCCATTAAATTTTCAATGGGGATATGATCATAGGGCAACT
TCCCAGTGGGGTTAAAAATGTAGGGTATTTTTTCCACCGGGGACGATGTT
TTGGCTTATTTTTTCCACAGGGGCAGGGGGTCCACCGGGTCTGTGACACA
GGGGTGTTTTTCGACTAGAATGACACCAATAATTATTATAGAACCCATCA
ATTTACCACCCACTGCTTCTAATTCAAATCTGGACCTATTATCAAAATTA
AAAAAGTATCACGACTCTCGTTTTAGAATAATAGATACCTTGGTTAAATT
GGAAATGGGTTTAAGGGGTTTGATTCATTGATAGCACGGCTATTTCCTAA
ACAATGTTCATTTTTTCAACAGTCAAAATTCCCTTTTTAAAATTACAAAA
AGTCGAAAACAAGAGTATCAATCTTGCATAATTCACACATGAGAAAATTA
CACAGTGTTGGTTTCATGCTAGTCCAATTTTCAGGCAATGTAATGATTTG
TAGGTACCTTTTCAACATGACTCAATTCGAATGAAATGAAATATACAAAG
TAACTGTTATCTTCAAATGCTTCAAACTTTTGAACCACTATAGTCAAAAT
TTGAAAAGTTAAACAATAGCAATTTTAAGTTTTTTAATCTACTTTACATT
GAGAAAGGATTCGGAAAACCTCATATTATTTTGGACACAGAGCTGGCCAT
CAAATCCTACTATTTTTCCGTGGGTCTCTCTGTCCGAACTGATAATCTGC
GCCCCTCTGTTTTAAGGTGGGATTGTCGTGGTTTTATAGTAAATTTCGGT
ATCCATTCTACTGTATGTTGATTTTTGTTTTTGAGGATTAAACATTTTTA
GGAATCTATTATTCCAGTGGACACCTGACTTAAAAACCCAATACCACTAA
TCTGAATGCTAGCCTTCTTACTTGCTTTCTAACATTGTGAAAAATGGAAA
GTTCCAGTTTCTCGTAGAATTCATCAATTTTTTACCCGAGAAATGTTTCA
TAGGAGAAGTGTTGCAAAATTGCATAAAATTTGATTGACAGTGAAAGGAC
GGAAGACTTCAGAGCACCATTATAAAGCATTTAGCTTTCACTTTTCAGGA
ACATTATGGAGGAAATTAATTTTAGCCATTCTTTTAAGACGTTGATACTT
AATTTGATATTTCCGGTGAAATATTTTGTGTCGAGTACACATTAAAGAAG
CTTCCTTTTATGACAAGTTGTGATGACACCTACAGAATGACAAAAATCGA
AATATTTATTGAAGGGTGTGTTACCAGACGACTTTTTTGTCAGCCGTTTT
GGTAGAATTTCAAGCCAGGATTTGGCTAAACTCTACGTATCAGAGTTAGG
TTACCTCTGAAGTTAAATAAAAAGTTTAAAGATATGCACTGATCTCTCGC
TTGACCTATCAAACTATCCTAAAATGGCGGCAAAAATAACTCAACATGGA
AAAAAGAAATTCTTGAAAACCAAATTTTGACGACTATGACAGTATTGGCA
ACACTGAGAATAAAGTTAACATATGGGCAACAATCTAAAAAATCCCATAA
TATCAATTTCAAAAATGTTAAGCTTATTAGGTCCCACGAATTACTGGTAA
CTAGTCTCCATGGCAGAGTACTGCCAAAAGTATCCTATAATTATTAAAGA
CAGCACATTTTTTCGAGTCCTTCCNTAACTAGTCTCCATGGCAGAGTACT
GCCAAAAGTATCCTATAATTATTAAAGACAGCACATTTTTTTTCGAGTCC
TTCCCCCCCCTTTATTCTCAAGGCCCTGAACAGTAAAAGTACCCCTCATT
TTATTCCGGTCCCTTGAGTTTAATAAAGTGCTCTTTTAAGAAGTTGCCAA
TTTGATGCTAGCACAATTAGTATTTTTGTATGTTTCATTTTTAAAACGGC
CAAAATAAGTTATGGTATTTTGCCCAAACCTATTTTCCTCCACCTAGAGC
TTTTCTTATTTTTGCTACTTTGATAAAAAAGGTTTTTCCTTCCTTTTGGC
TACTTTTCCGAATAATATTCCCAACTTCTTTTTGAAGAGATATATAGTGA
AGTTATGTGTACTGAAAGAAAATACAAACTAGCGACTAACCATGACAATC
TAAAATTAAAAAAAAAAGTGCCCGAGCGGCTGCCTCAAAGGGAAGAGGGA
GAAGAAATGACAAAAAAAATCAAGAAAATGAAGATTAAACATAAAGACAT
ATATAAACAATAAAAAATGAAAAAAAAATTATGAAAAAAGTCCAATATTC
TTTTTTGTAATTTTATTTGTAAATAAGGAAAGCTCTCGACAGCAGATTCG
TATAGGGGAAAAATAAGAAAAATAATGCTTCAATGGATGAGCGACGATAC
AAATTTAACCGAATCTGCTGCAAATTTTTTCAATTCATTATGTTTACCAA
AAGTCCTTTTGAAAATGTCCTTCAGTTTATGAGGCTGAGCACCTAAATTT
TTCATTCTCTCAATAATACTTTTAGCGGACTTAATGAATGGTTCAACTGT
TGAACTTGTGCGACCTATTCTCAAGATTTCTGCACCAATGGTGGAATAAA
AGATTTTAGAATGCATGTTGCTGCATTTAAAAGGCATTCTAACTATAGAA
AAAGGAAAGCTATCAAACGGTCATACAATGAGGTATTGAAAGATCTTCCC
TGTATCGAAATGTCTAATTCAAGGAAAGGTACGTGTAGGTCACCTTGTTC
CTTCTTAAGTTCTATTTCGGAGGAACAAGTTTTCGATTCTTTTACTGGGT
AATCGTGTTCTATTTAATCACAGTCTTCCTTTCTTCCATAATTCGAATCA
GATGCTATTTGTTCTTTACGCTTTTTCTTAGATTTTTTAAGTACAACTCT
TAAGCCCATTTATAAAATAGTACATTAGCATAAAAACCTCTTTAATTGAC
TCATCTATTGAGTAAAGTGGCAAAGTTCCACTTCAGTCCTACCTCAGTCT
CAAAAGCTGCAGACTCAGCACAAGGAAGTGAGCAACTCGTTAAGAAGCAT
TAGCAATTAAATGTAAAAAAATGAAAATTTATGGTTAAGAACTCTTCCTT
AATAGGTTAGTAAGTACATCCCTATTAAATATTTCCTGTATATTCATAAA
TACTTTTTGAGAAGGAAGAAACTGGGCACTAGGCCCTAAGAAATTCAGTA
TAAAAAGAGGGTTTAGTAGATTTAAAATCATTCACAATTTGAGGTCAAGC
AAGCATAACAAGCAAAGAGTAAATTGTGAAATACAAATTACCAACACATT
CAAAGACAGAAGAAGATCAGTTAGTTTGAGCTCGTCAAAAGGTATGTTTA
ACTTTTTTAATCTTTGTCATCAGTTACATATTTAACTTAACATGTAATCG
TAGGCATTTTTCTTTTTTATAAAGTTTAAACTCTTTAATCATTTCATCCC
TTAACATAAATCGCGAAAATAAATTTGACCTTTTTATTTGATTTTTTTTT
TTAGGAAAGCCATGAAGAGTCTGGCATTGTTATTGGTCATTGCCATCATT
GGCCAGTCTCACGCACGTAAGTTGATGTCAGATTCATATACCGAGTGTTC
CTCAAAAAAGTTTCTCTCTTTAAAAATAACTTTCTAGAAATCTAAGAATT
TTCAAAGAAACATTCCTATTTCATTGGAAGGAAGAAAGATAAACTTAAAT
TTTTATGGGTTATTTATTAAATTCGATACATTAGATCAAAAGTTATGCTC
AATTGAATAAAAAAGTTACTTTCAGGAAGTGCTCGAAAACGTTGAAATAC
ATGATTAAATGCATTTTTTAGTAATTAANAGGAAGTGCTCGAAAACGTTG
AAATACATGATTAAATGCATTTTTTATTAATTAAACACATAAATTTCGAA
ACTGTAAGGCCGAATGGGTTTGAAATCTTCATCAAAATCACTTTAATTTA
CTTTTACCGAAAGTTTCCTCAGATTTTTGGTTTTAGATTGGATAAAAGTC
TATGTAAGGCTGAATGTATCTCGAAACCCATATTTAATGTATTTTTATGA
ATTTTACAAGATTTTTTTTGCCTTTTTCTACCAATTTTCTTCCTTTTATT
TAAACTCAACCTTCCTTTATATAATAAAAGGTAATTTAGACAGCTAATTA
TCATTTTTAATGACTTAAACTAAGATGATGATTTATCATATAATTATGCT
TCTGTTTAACTTGATAGGTAGACTTTTTAACGTTTTTGAGCACTTTCAGA
AAGTAACTTTTTTATTTAATTGTGCATAACTTTTGATCTAATGAATCAAA
TTTAATAAATGAAACATCAAAATTTGATTAATCTTTCTTTTTTCCAATGA
AATACGAATGTTTTTTATAAAACTTTTATTTAGACTTCTAGAAAATTAAT
TTTAAAGAGAGAAACTTTTTTGTGGCACACCCGGTAGTGTTGCAAAAATT
GAAATATTTGCTTCTACTTCTTCTGATCCTCCTAAGTAAATATTATTAGC
ATTACAAGAAAAATAAGTTTTTGAAATTAGTTTTTTCAATCTTGCTTATG
AATTTTAGGGGAGATAGCTTTAAAAGTCCCTTTGTTGATCTAAAATCAAA
ACTGTCAAAAGAGTTGTACACAATATCAGAAAATAATATAATTTTTATTT
AGGTACCTTACGAGGTGATTGCGAAGGAGTCCACTGTCAATACGGAGGGA
AGTGTAAGGAGCTCGTTTATGGCGGCTTTGAATGTAAATGCACGAGAGGA
TTTGCAGGAAAGTTCTGTGAAATAGACACTAACAAATGCAAAGGAGTCCA
TTGTCAAAACGAAGGAAAATGCAAAACTGTTGGCAACACGTTCAAATGTG
AATGCAGAAAGGGCTATGAAGGAAAGTGGTGTGAAATCGACACTAACAAA
TGCAAAGGAGTCCATTGTCAAAACGGAGGAAAATGCAAAACTGTTGGCAA
CACCTACAAATGTGAATGCAAAAAGGGN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018157TCONS_00018157Clytia hemisphaericatranscript
TCONS_00018156TCONS_00018156Clytia hemisphaericatranscript
TCONS_00018155TCONS_00018155Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00018156-proteinTCONS_00018156-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000290supercontigsc0000290:322447..332574 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.55	0.38	0.88	0.88	1.07	0.43	0.17	0.47	0.58	0	0.26	0.36	0.6	0.09	14.08	1.9	0.79	0.2	0	0.29	0.66	1.49	0.15	0	0.28	0	0	0	0	0