TCONS_00018155 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00018155
Unique Name	TCONS_00018155
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	482

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000290:322447..332574-

transcript sequence

>TCONS_00018155 ID=TCONS_00018155|Name=TCONS_00018155|organism=Clytia hemisphaerica|type=transcript|length=482bp
AGCAAGCATAACAAGCAAAGAGTAAATTGTGAAATACAAATTGCTAACAC
ATTCAAAGACAGAAGAAGATCAGTTAGTTTGAGCTCGTCAAAAggaaaGC
CATGAAGAGTCTGGCATTGTTATTGGTCATTGCCATCATTGGCCAGTCTC
ACGCACgTACCTTACGAGGTGATTGCGAAGGAGTCCACTGTCAATACGGA
GGGAAGTGTAAGGAGCTCGTTTATGGCGGCTTTGAATGTAAATGCACGAG
AGGATTTGCAGGAAAGTTCTGTGAAATAGACACTAACAAATGCAAAGGAG
TCCATTGTCAAAACGAaggaaaatgcaaaactgttggcAACACGTTCAAA
TGTGAATGCAGAAAGGGCTATGAAGGAAAGTGGTGTGAAATCGACACTAA
CAAATGCAAAGGAGTCCATTGtcaaaacggaggaaaatgcaaaactgttg
gcaacacctacaaatgtgaatgcaaaAAGGGN

Run BLAST on NCBI

transcript from alignment at sc0000290:322447..332574-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00018155 ID=TCONS_00018155|Name=TCONS_00018155|organism=Clytia hemisphaerica|type=transcript|length=10128bp|location=Sequence derived from alignment at sc0000290:322447..332574- (Clytia hemisphaerica)
AGCAAGCATAACAAGCAAAGAGTAAATTGTGAAATACAAATTGCTAACAC
ATTCAAAGACAGAAGAAGATCAGTTAGTTTGAGCTCGTCAAAAGGTATTT
TTAACTTTTTTTAATCTTTGTCATCAGTTACATATTTTATTTAACATGTC
ATTGCAGGCATTTTTCTTCTTATAAAGTTTCAACCCTTTAATCATTTCAT
CCCTTAACAGAAATCACGAAAAGAAATCTGACCTTTTTATTTGATTTTTT
TTTCATTTTAGGAAAGCCATGAAGAGTCTGGCATTGTTATTGGTCATTGC
CATCATCGCCCAGTCACACGCACGTAAGTTGATGTCAGATTCATATACCG
GGTGTGCCACAAAAAAGTTTCACTTTAAAACTAGAAATCTAGAAATCTAA
ATTAAAAAAAAAACATTCCTATTTTATTGGAAAGAATAATGATAAACTAA
AATTTTGATGGGTTATTTATTAAATTCGATTCATTAGATCAAATCAAATT
ATGCTCAATTGAATAATAAAGTTACTTTCAGAAAGTGCTCGAAATGTTTG
TTTCTACTTCTTTTTATCCTTCAAAGTATATATTCGCATTACAAGAAAAA
TAAGTTTTTGAAATTATTTTCTTCCAGCTTACTGCTCATGAATTTTAGGG
AAAATATCTTTAAAAGTCCCTTCGTTGATCTAAAATCGAAACTGTCAAAA
GAATTATACACTGTTAAACACGATATCAGAAAATAATATCATTTCTATTT
AGGTACCTTACGAGGTGATTGCGAGGGAGTTCACTGTCAATACGGAGGGA
AGTGTAAGGAGCTCGTTTATGGCGGCTTTGAATGTAAATGCACAAGAGGA
TTCGCAGGAAAGTTCTGTGAGATCGACACTAACAAATGCAAAGGAGTCCA
TTGTCAATACGGAGGAACATGCAAAACTGTTGGNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGAATTGTGAAATCAAGACT
GACCGATGCAAAGGAGTCACATGTCGAAATGGAGGAAAATGCAAAACTGT
TGGCAACACCTACAAATGTGAATGCAAAAAAAGGATACGAAGGAAAGAAT
TGTGAAATCAAGACTGACCGATGCAAAGGAGTCACATGTCGAAATGGAGG
AAAATGTAAAACTGTTGGCAACACCTACAAATGTGAATGCAAAAAAGGAT
ACGAAGGAAAGAATTGTGAAATCAAGACTGACCGATGCAAAGGAGTCACA
TGTCAAAATGGAGGAAAATGCAAAACTGTTGGCAACACCTACAAATGTGA
ATGCAAAAAAGGATACGAAGGAAAGAATTGTGAAATCAAGACGGACCGAT
GCAAAGGAGTCACATGTCGAAATGGAGGAAGATGCAAAACTGTTGGCAAC
ACCTACAAATGTGAATGCAAAAAAGGATACGAAGGAAAGAATTGTGAAAT
CAAGACTGACCGATGCAAAGGAGCCCCTTGTCGAAATGGTGGAAAATGCA
AAACTGTTGGCAACACCTACAAATGTGAATGCAGAAAGGGATACGAAGGA
CAGCATTGTGAAATTGAAAATGACCGATGTAGAGGAATCGTTTGTCAAAA
TGGTGGAAAATGTAAAACTGTTGGAGACAGCTTCAAATGTAAATGCAGGA
GAGGATTTACTGGAAAGCATTGTGAAAACAGACCTTACTAACTTTTCAAA
GTTTAGTTTGGAATTTGCGGAAATGAAAATGGAATATGTTAAACGATTTT
ATTCAATTATCTTTTTATTTTAAGCTCTAATAATTCTTTTTTATTGGGTT
CTTTTAGCGGGGTTTTCAAAGTTTACTTTCTGAAATTTTAGGTTGATAGT
TAATCAATATAAGAATTTTCCAAGTTTCACAACGAGATGTTGTTGAATAA
GTTATTCGTGATTTGGATTAAAGTGAAATTCCTTTGATAGTGTTGGGACT
AATTTTTATATCAAAATAGGTATTTGATAATCTTATTATTTATCGTGATA
TTTATATAGTTTATAACATTTAAATTTTATTAGAAATTTCGGGAATTTTT
TTGCTCATTATTTTCTTTATTTAATACATTGCATGAATTGAAATTTTAAT
GAAGTGTTGTTAATTCTGCCAGATGATCTACAAAAGTAGCCGCAATATAT
ACTCTATTTGGAAGTTTCAATTTAAAATCCTGGAAATTTGCCTTCTTGTA
AGGCACAAATAATCATCTTTACTTAACGAAAATCCTGCACGTGGACAGTT
TTCTACGAATTTCTACGAAAGTTTAATGGCGTGTCTAAAGGAGCGATGGC
CAACTTAGGAGCGACGGCCGAACAGAGAGACCCAGAGAGAAGGTGTCAGC
GCTTCAAACCAGAGATTCGCGGTTCGAATCCTCACTCCTTCCAATGTTCT
GTTCAGTTCATAGATAGCCAAACTGGCTGGCCGTGGACCCCATGAAAACA
ATCGCAAGACTGCCTAAAAGTCCTAGATTACTTGGCTATCCACGTTAAAT
ATCGACTCTATCCATCTATAAATGGTTGAATTTGGATTCGAAGATGAATC
ATCATCTGTAGTAGAGCCCGAAAAATCATAACCATTTCTAGATACCAATT
GTTTGCTTATACCGTGTGCGCCACAAAAACAGTTTCTCTCTTTAAAACTA
ATTTTCCCGAAATTNCCGTGTGCGCCACAAAAACAGTTTCTCTCTTTAAA
ACTAACTTTCCCGAAATCTAAAAATTTTAAAAGACCCATTCCTATTCCAT
TGGAAAGAAGAAAGATAAACTTAAATTTTGATGGGTTATTTATTAAATTC
GGTTCATTAGATCGAAAGTTATACTCTATTGAATAAAAAAGTTACTTTTT
GAAAGTGCTCAAAAAGTGCTCATTGTTTTTTTATAAGCATAACTTTTATA
AGCATACTGAAGCGCAAATTTCCAGAAAAATTAAGCATTCGCTAAGCATA
CCTTTAGGCTCAGCCAAAGAATCATAATTTCCAAAACTTCAGAAAATAAC
AGAAGAATGAAGAAGAGAATTACAAACAAAATTCGAAAAATTTGTGATTT
TATTTTGTTTATTTTACACAACTTGGTCTCTTAAGAATGCACACTTTCTA
AACTTACATGTTTTTTACCAAGCATAGGGTTAAGCATAATTCGAGTCTCA
AAATTGAGCTTTACTTAAGCATAGTGAGCTTCAGCCGAAATACTGTATGC
TTAAAAAAAAATGAGTGTAACATGATGCATCAGTATTTTCGTTTCAGTCA
TTAAAAATGATAATTAGCTGTCTAAATGACCGTTTGTTATATAAAGGAAG
ATTGAATTTCAATGAAAGGCAGAAAATTCATCGAAAAAGCCAAAAAATCT
GGTAAAATTCTTAAAGATGTATCAAATATGGGTTTCGAGGTACATACAGC
CTTACATCAGGTCTAGAACCAAAAATCTGAGGAAAATTTCGTTAAAAGTA
AATTGAAATGATTTTGATGAACATTTTAAACCGTTTCGTTCCATCAGTTT
CAAAATTTATGTGTTTAATTACTGAAAATTGGTCTTAATCATTTAAAGCC
TCTTGAGATTGCCAATTTTAAAATAAAAATTTGATAGGTCGAGTTTTAAC
GTTTCCGGGCACTTTCTGAAAGTAACTTTTTTATTCGATTGAGCATAACT
TTTGATCTAATAAATCGAATTTATTGAATGACCCATCAAAATTTAAGTTT
ATCTTTCTTTTTTCTGATGGAATAGAAATAGTTGTTTCTTAATTCTTGGA
TTTCGAAAAAATCAGTTTCAAAGAGAGAAACTCTTTTGTGGCGCACCCGG
TATAATTGTGATTTTTACTCGGAATTTCAGCTTAATCATAGTTTAATTGT
TTCGAAATCCTTTGACGATACGACTTTGGTACGTTATGTGCTTCGGGCCT
GGCTACCCCTTTTTTTAAGTGTCTTTGATTTGTATGTTTTAAGGTACCTT
AAATGTTCATTCTTCGGACTTTTCGACACCCCTGTCTCAGCGCCCCGGTG
GAGCCTTTTTCCTCAGTGGGGATGGAAATTTCTATCGAAATCCCAACGGG
GATAGAAAATCTTTTCCAAAATTGTTTCCAGCTCAAAAATTCCAGTGGGG
ATGGTTTTGGAGTCCAATTTTTCCATTCAATTTTCAATGGGGATATGATC
ATAGGGCAACTTCCCAGTGGGGTTAAAAATGTAGGGTATTTTTTCCACCC
GGGACGATCNTCCATTAAATTTTCAATGGGGATATGATCATAGGGCAACT
TCCCAGTGGGGTTAAAAATGTAGGGTATTTTTTCCACCGGGGACGATGTT
TTGGCTTATTTTTTCCACAGGGGCAGGGGGTCCACCGGGTCTGTGACACA
GGGGTGTTTTTCGACTAGAATGACACCAATAATTATTATAGAACCCATCA
ATTTACCACCCACTGCTTCTAATTCAAATCTGGACCTATTATCAAAATTA
AAAAAGTATCACGACTCTCGTTTTAGAATAATAGATACCTTGGTTAAATT
GGAAATGGGTTTAAGGGGTTTGATTCATTGATAGCACGGCTATTTCCTAA
ACAATGTTCATTTTTTCAACAGTCAAAATTCCCTTTTTAAAATTACAAAA
AGTCGAAAACAAGAGTATCAATCTTGCATAATTCACACATGAGAAAATTA
CACAGTGTTGGTTTCATGCTAGTCCAATTTTCAGGCAATGTAATGATTTG
TAGGTACCTTTTCAACATGACTCAATTCGAATGAAATGAAATATACAAAG
TAACTGTTATCTTCAAATGCTTCAAACTTTTGAACCACTATAGTCAAAAT
TTGAAAAGTTAAACAATAGCAATTTTAAGTTTTTTAATCTACTTTACATT
GAGAAAGGATTCGGAAAACCTCATATTATTTTGGACACAGAGCTGGCCAT
CAAATCCTACTATTTTTCCGTGGGTCTCTCTGTCCGAACTGATAATCTGC
GCCCCTCTGTTTTAAGGTGGGATTGTCGTGGTTTTATAGTAAATTTCGGT
ATCCATTCTACTGTATGTTGATTTTTGTTTTTGAGGATTAAACATTTTTA
GGAATCTATTATTCCAGTGGACACCTGACTTAAAAACCCAATACCACTAA
TCTGAATGCTAGCCTTCTTACTTGCTTTCTAACATTGTGAAAAATGGAAA
GTTCCAGTTTCTCGTAGAATTCATCAATTTTTTACCCGAGAAATGTTTCA
TAGGAGAAGTGTTGCAAAATTGCATAAAATTTGATTGACAGTGAAAGGAC
GGAAGACTTCAGAGCACCATTATAAAGCATTTAGCTTTCACTTTTCAGGA
ACATTATGGAGGAAATTAATTTTAGCCATTCTTTTAAGACGTTGATACTT
AATTTGATATTTCCGGTGAAATATTTTGTGTCGAGTACACATTAAAGAAG
CTTCCTTTTATGACAAGTTGTGATGACACCTACAGAATGACAAAAATCGA
AATATTTATTGAAGGGTGTGTTACCAGACGACTTTTTTGTCAGCCGTTTT
GGTAGAATTTCAAGCCAGGATTTGGCTAAACTCTACGTATCAGAGTTAGG
TTACCTCTGAAGTTAAATAAAAAGTTTAAAGATATGCACTGATCTCTCGC
TTGACCTATCAAACTATCCTAAAATGGCGGCAAAAATAACTCAACATGGA
AAAAAGAAATTCTTGAAAACCAAATTTTGACGACTATGACAGTATTGGCA
ACACTGAGAATAAAGTTAACATATGGGCAACAATCTAAAAAATCCCATAA
TATCAATTTCAAAAATGTTAAGCTTATTAGGTCCCACGAATTACTGGTAA
CTAGTCTCCATGGCAGAGTACTGCCAAAAGTATCCTATAATTATTAAAGA
CAGCACATTTTTTCGAGTCCTTCCNTAACTAGTCTCCATGGCAGAGTACT
GCCAAAAGTATCCTATAATTATTAAAGACAGCACATTTTTTTTCGAGTCC
TTCCCCCCCCTTTATTCTCAAGGCCCTGAACAGTAAAAGTACCCCTCATT
TTATTCCGGTCCCTTGAGTTTAATAAAGTGCTCTTTTAAGAAGTTGCCAA
TTTGATGCTAGCACAATTAGTATTTTTGTATGTTTCATTTTTAAAACGGC
CAAAATAAGTTATGGTATTTTGCCCAAACCTATTTTCCTCCACCTAGAGC
TTTTCTTATTTTTGCTACTTTGATAAAAAAGGTTTTTCCTTCCTTTTGGC
TACTTTTCCGAATAATATTCCCAACTTCTTTTTGAAGAGATATATAGTGA
AGTTATGTGTACTGAAAGAAAATACAAACTAGCGACTAACCATGACAATC
TAAAATTAAAAAAAAAAGTGCCCGAGCGGCTGCCTCAAAGGGAAGAGGGA
GAAGAAATGACAAAAAAAATCAAGAAAATGAAGATTAAACATAAAGACAT
ATATAAACAATAAAAAATGAAAAAAAAATTATGAAAAAAGTCCAATATTC
TTTTTTGTAATTTTATTTGTAAATAAGGAAAGCTCTCGACAGCAGATTCG
TATAGGGGAAAAATAAGAAAAATAATGCTTCAATGGATGAGCGACGATAC
AAATTTAACCGAATCTGCTGCAAATTTTTTCAATTCATTATGTTTACCAA
AAGTCCTTTTGAAAATGTCCTTCAGTTTATGAGGCTGAGCACCTAAATTT
TTCATTCTCTCAATAATACTTTTAGCGGACTTAATGAATGGTTCAACTGT
TGAACTTGTGCGACCTATTCTCAAGATTTCTGCACCAATGGTGGAATAAA
AGATTTTAGAATGCATGTTGCTGCATTTAAAAGGCATTCTAACTATAGAA
AAAGGAAAGCTATCAAACGGTCATACAATGAGGTATTGAAAGATCTTCCC
TGTATCGAAATGTCTAATTCAAGGAAAGGTACGTGTAGGTCACCTTGTTC
CTTCTTAAGTTCTATTTCGGAGGAACAAGTTTTCGATTCTTTTACTGGGT
AATCGTGTTCTATTTAATCACAGTCTTCCTTTCTTCCATAATTCGAATCA
GATGCTATTTGTTCTTTACGCTTTTTCTTAGATTTTTTAAGTACAACTCT
TAAGCCCATTTATAAAATAGTACATTAGCATAAAAACCTCTTTAATTGAC
TCATCTATTGAGTAAAGTGGCAAAGTTCCACTTCAGTCCTACCTCAGTCT
CAAAAGCTGCAGACTCAGCACAAGGAAGTGAGCAACTCGTTAAGAAGCAT
TAGCAATTAAATGTAAAAAAATGAAAATTTATGGTTAAGAACTCTTCCTT
AATAGGTTAGTAAGTACATCCCTATTAAATATTTCCTGTATATTCATAAA
TACTTTTTGAGAAGGAAGAAACTGGGCACTAGGCCCTAAGAAATTCAGTA
TAAAAAGAGGGTTTAGTAGATTTAAAATCATTCACAATTTGAGGTCAAGC
AAGCATAACAAGCAAAGAGTAAATTGTGAAATACAAATTACCAACACATT
CAAAGACAGAAGAAGATCAGTTAGTTTGAGCTCGTCAAAAGGTATGTTTA
ACTTTTTTAATCTTTGTCATCAGTTACATATTTAACTTAACATGTAATCG
TAGGCATTTTTCTTTTTTATAAAGTTTAAACTCTTTAATCATTTCATCCC
TTAACATAAATCGCGAAAATAAATTTGACCTTTTTATTTGATTTTTTTTT
TTAGGAAAGCCATGAAGAGTCTGGCATTGTTATTGGTCATTGCCATCATT
GGCCAGTCTCACGCACGTAAGTTGATGTCAGATTCATATACCGAGTGTTC
CTCAAAAAAGTTTCTCTCTTTAAAAATAACTTTCTAGAAATCTAAGAATT
TTCAAAGAAACATTCCTATTTCATTGGAAGGAAGAAAGATAAACTTAAAT
TTTTATGGGTTATTTATTAAATTCGATACATTAGATCAAAAGTTATGCTC
AATTGAATAAAAAAGTTACTTTCAGGAAGTGCTCGAAAACGTTGAAATAC
ATGATTAAATGCATTTTTTAGTAATTAANAGGAAGTGCTCGAAAACGTTG
AAATACATGATTAAATGCATTTTTTATTAATTAAACACATAAATTTCGAA
ACTGTAAGGCCGAATGGGTTTGAAATCTTCATCAAAATCACTTTAATTTA
CTTTTACCGAAAGTTTCCTCAGATTTTTGGTTTTAGATTGGATAAAAGTC
TATGTAAGGCTGAATGTATCTCGAAACCCATATTTAATGTATTTTTATGA
ATTTTACAAGATTTTTTTTGCCTTTTTCTACCAATTTTCTTCCTTTTATT
TAAACTCAACCTTCCTTTATATAATAAAAGGTAATTTAGACAGCTAATTA
TCATTTTTAATGACTTAAACTAAGATGATGATTTATCATATAATTATGCT
TCTGTTTAACTTGATAGGTAGACTTTTTAACGTTTTTGAGCACTTTCAGA
AAGTAACTTTTTTATTTAATTGTGCATAACTTTTGATCTAATGAATCAAA
TTTAATAAATGAAACATCAAAATTTGATTAATCTTTCTTTTTTCCAATGA
AATACGAATGTTTTTTATAAAACTTTTATTTAGACTTCTAGAAAATTAAT
TTTAAAGAGAGAAACTTTTTTGTGGCACACCCGGTAGTGTTGCAAAAATT
GAAATATTTGCTTCTACTTCTTCTGATCCTCCTAAGTAAATATTATTAGC
ATTACAAGAAAAATAAGTTTTTGAAATTAGTTTTTTCAATCTTGCTTATG
AATTTTAGGGGAGATAGCTTTAAAAGTCCCTTTGTTGATCTAAAATCAAA
ACTGTCAAAAGAGTTGTACACAATATCAGAAAATAATATAATTTTTATTT
AGGTACCTTACGAGGTGATTGCGAAGGAGTCCACTGTCAATACGGAGGGA
AGTGTAAGGAGCTCGTTTATGGCGGCTTTGAATGTAAATGCACGAGAGGA
TTTGCAGGAAAGTTCTGTGAAATAGACACTAACAAATGCAAAGGAGTCCA
TTGTCAAAACGAAGGAAAATGCAAAACTGTTGGCAACACGTTCAAATGTG
AATGCAGAAAGGGCTATGAAGGAAAGTGGTGTGAAATCGACACTAACAAA
TGCAAAGGAGTCCATTGTCAAAACGGAGGAAAATGCAAAACTGTTGGCAA
CACCTACAAATGTGAATGCAAAAAGGGN

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_010187	XLOC_010187	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00018155-exon-sc0000290-1575043694:332481..332574	TCONS_00018155-exon-sc0000290-1575043694:332481..332574	Clytia hemisphaerica	exon
TCONS_00018155-exon-sc0000290-1575043694:323859..323920	TCONS_00018155-exon-sc0000290-1575043694:323859..323920	Clytia hemisphaerica	exon
TCONS_00018155-exon-sc0000290-1575043694:322447..322772	TCONS_00018155-exon-sc0000290-1575043694:322447..322772	Clytia hemisphaerica	exon
TCONS_00018155-exon-sc0000290-1510915933:332481..332574	TCONS_00018155-exon-sc0000290-1510915933:332481..332574	Clytia hemisphaerica	exon
TCONS_00018155-exon-sc0000290-1510915933:323859..323920	TCONS_00018155-exon-sc0000290-1510915933:323859..323920	Clytia hemisphaerica	exon
TCONS_00018155-exon-sc0000290-1510915933:322447..322772	TCONS_00018155-exon-sc0000290-1510915933:322447..322772	Clytia hemisphaerica	exon
TCONS_00018155-exon-sc0000290-1491911889:332481..332574	TCONS_00018155-exon-sc0000290-1491911889:332481..332574	Clytia hemisphaerica	exon
TCONS_00018155-exon-sc0000290-1491911889:323859..323920	TCONS_00018155-exon-sc0000290-1491911889:323859..323920	Clytia hemisphaerica	exon
TCONS_00018155-exon-sc0000290-1491911889:322447..322772	TCONS_00018155-exon-sc0000290-1491911889:322447..322772	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000290	supercontig	sc0000290:322447..332574 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.19009	0.441425	0.287911	0.350503	0.0692431	0.0835389	0.234624	0.0547553	0	0.131662	0.0865494	0.0607113	0.0448787	1.65487	1.42544	0.585341	0.0999926	0	0.144559	0.062824	0.209835	0.074502	0	0.139527	0	0	0	0	0

Blast

[Close]

BLAST of TCONS_00018155 vs. Swiss-Prot (Human)
Match: FAT4 (Protocadherin Fat 4 OS=Homo sapiens GN=FAT4 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 1.314e-23
Identity = 43/104 (41.35%), Postives = 55/104 (52.88%), Query Frame = 3

Query:  171 DCEGVHCQYGGKCKELVYGGFECKCTRGFAGKFCEIDTNKCKGVHCQNEGKCKTVGNTFKCECRKGYEGKWCEIDTNKCKGVHCQNGGKCKTVGNTYKCECKKG 482
            +C    C  GG C  LV GGF C C  GF G+ CE D N+C    C+N   C+    +F C C+ GY GK CE   N C+   C NGG C++  ++Y C C  G
Sbjct: 3865 ECLPSPCHSGGTCHNLV-GGFSCSCPDGFTGRACERDINECLQSPCKNGAICQNFPGSFNCVCKTGYTGKMCESSVNYCECNPCFNGGSCQSGVDSYYCHCPFG 3967

HSP 2 Score: 84.3445 bits (207), Expect = 1.105e-18
Identity = 33/84 (39.29%), Postives = 46/84 (54.76%), Query Frame = 3

Query:  231 FECKCTRGFAGKFCEIDTNKCKGVHCQNEGKCKTVGNTFKCECRKGYEGKWCEIDTNKCKGVHCQNGGKCKTVGNTYKCECKKG 482
            F CKC  G+AG +CEID ++C    C + G C  +   F C C  G+ G+ CE D N+C    C+NG  C+    ++ C CK G
Sbjct: 3846 FLCKCLPGYAGSWCEIDIDECLPSPCHSGGTCHNLVGGFSCSCPDGFTGRACERDINECLQSPCKNGAICQNFPGSFNCVCKTG 3929

The following BLAST results are available for this feature:

BLAST of TCONS_00018155 vs. Swiss-Prot (Human)

BLAST of TCONS_00018155 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
FAT4	1.314e-23	41.35	Protocadherin Fat 4 OS=Homo sapiens GN=FAT4 PE=1 S...	[more]

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TCONS_00018155 (transcript) - C. hemisphaerica