XLOC_009563 (gene) - C. hemisphaerica

Overview
NameXLOC_009563
Unique NameXLOC_009563
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000259:262525..265054+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009563 ID=XLOC_009563|Name=XLOC_009563|organism=Clytia hemisphaerica|type=gene|length=2530bp|location=Sequence derived from alignment at sc0000259:262525..265054+ (Clytia hemisphaerica)
gttcaattaaaaatgatttttgattgtTCACATCCAGTAAGATTTTTTGT GAAACCAGTTGCTTGACTATAAAATACTTTTTCCTAAaccaaaacatttt ctttaCCCTTCttctcaaaacattttttcatttgagttaaAATAGTCTCT AGCCTTCTATCAATTGCTAGCAAGTGATCTTTAGTCAATACGGGATAAAT AGGGTCTGATGCTAATTTCTTTTCAAGAGTTTGGCTCAAGGAAATCTCAG TTTGCTCGTCAGTGATGTATGAACTTATTACTAGATATGTTTGATGTCTT AGTGTACAACATTGCATCAATGGGGCTAGGATACTAAGCTCGTCATGATT AGGGTTCCCAAAACTTTTGCCATTATCTAAATGTATGACCATACTTGTAT CTTTGTTTCTCGTAAATTCATAATGATGTCTATCTGCATTaccaatcaaa aaatcaaatattgATGTGTCCATTAAGTCTAGCAATCTTGGTCCTTGATC ATAAGGAGGCTTTGTAATAACATTATCGCAATAATTTGAATCAATCTCCC ATTTTGCTTTTCTATTTTTACGATAGGTTCTTTGCCACGGGTGTCtcatt ttataaagtttgacATGTTTTGGGAGCCATAGAGTGAGTGAAGCTTCCAT TATTTCCCCTTTACCACAGGCAGATTCTTCCCTTTTGCAATACatacatt ttccaaaaaaacaaatattgTTTGAATTGTCTCTCCAAAAAGTATCCAGC AGTGAGGTTTGAGCAACATTTATTACTTCTTCTCTCAAATTAACTAATCT ACCGACAACTGGAGGAGCTCTATTGAATCCTAGGATTCTATCTAAATGAA ATGCAGCTATTTCGCCATTGTGTCTATCATAGCCTTCATATGGGGTTCCG CCAAGAATTTTGTCTCTTGAGTAACGCTTTGGTTTAAAAACCACCTCTTG TTTCTTAAGTGGTGGTCCATCAAGAACaaactgtgcttttaattgtgTTC CCTTAACTCCAACTTTTGCttgtaatatttttgttttagccATTGCATTC AGTATCATGTCTACTTGAAGATCAGAGATACTAGTTATGGCTCGAGCTTC TGGCATTTCTTTCCAGATAATCCATGGATGTATTTTCTCCTCAGTTGCAA CAGAATCTGTTGATCTTTTAGTGTTTTGCCaagtgttttgttttgaatta aagTGAAGAAGACACAAGACAAAAACACTGACAACAATCAGGGAAAATCT TTGTTTCCACTTCATtgcaaaaatgtgaaaaagaaatCCACAAACAGTCA AACCCACCAAATGCCAAACAAAAAATGATCAGCACACATCCAAGTAGAAA GAGTTTTTAGCATTCAGAGAGCAGCAGAGAgcgataaaatttgaaaaaaa aaatcttacaacGTGTCGTATAATACCATAAAAGATTACAACATAGTTTT CTACTTTNAACatacattttccaaaaaaacaaatattgTTTGAATCGTCT CTCCAAAAAGTATCCAGCAGTGAGGTTTGAGCAACATTTATTACTTCTTC TCTCAAATTAACTAATCTACCAACAACTGGAGGAGCTCTATTGAATCCTA GGATTCGATCTAAATGAAATGCAGCTATTTCGCCATTGTGTCTATCATAG CCTTCATACGGGGTTCCGTCAAGAATTTTGTCTCTTGGGTAACGCTTTGG TTTAAAAACCACCTCTTGTTTCTTAAGTGGTGGTCCATCAAGAACaaact gtgcttttaattgtgTTCCCTTAACTCCAACTTTTGCttgtaatattttt gttttagccATTGCATTCAGTATCATGTCTACTTGAAGATCAGAGATACT AGTTATGGCTCGAGCTTCTGGCATTTCTTTCCAGATAATCCATGGATGTA TTTTCTCCTCAGTTGCAACAGAATCTGTTGATCTTTTAGTGTTTTGCCaa gtgttttgttttgaattaaagTGAAGAAGACACAAGACAAAAACACTGAC AACAATCAGGGAAAATCTTTGTTTCCACTTCATtgcaaaaatgtgaaaaa gaaatCCACAAACAGTCAAACCCACCAAATGCCAAACAAAAAATGATCAG CACACATCCAAGTAGAAAGAGTTTTTAGCATTCAGAGAGCAGCAGAGAgc gataaaatttgaaaaaaaaaatcttacaacGTGTCGTATAATACCATAAA AGATTACAACATAGTTTTCTACTTTTTGAATTGCACAAGCAACCCCACCA GTCTTctatttgttgaaaaaaaacttgttaagaaagttttttaaaatctC CATTTACTTCTTGGTTTGACAGAAAGTGAAAGTGGATTGTTACGCATGTG GGAAATCTTGACAACTCATATTTTTGAGCTCCACCGTGGTGGCTTTCGGC ACAAATTCATCCAATAATCTGGTTGTTCACATTTGAAATCATCTACGAAG AAGCTTATACTTTTATTCTTTTGATTGGTTCTTGTAATTTTGTCTTGATT AGCTCTGCTACTTGCTATAAATAGATCTAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00017103TCONS_00017103Clytia hemisphaericatranscript
TCONS_00017104TCONS_00017104Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000259supercontigsc0000259:262525..265054 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
FAM20BPREDICTED: glycosaminoglycan xylosylkinase isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.14 5.19 1.6 1.95 4.05 3.48 7.09 6.25 2.59 2.71 4 2.43 3.01 2.55 3.3 4.75 4.35 4.44 0.8 1.58 3.09 2.79 9.52 10.11 3.18 3.93 3.33 1.79 8.22 8.06