XLOC_009357 (gene) - C. hemisphaerica

Overview
NameXLOC_009357
Unique NameXLOC_009357
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000248:393270..398043+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009357 ID=XLOC_009357|Name=XLOC_009357|organism=Clytia hemisphaerica|type=gene|length=4774bp|location=Sequence derived from alignment at sc0000248:393270..398043+ (Clytia hemisphaerica)
tttttagaATACGGTGTGAATTGGTAAGactttttccattttcatttcat
tgaatCATTATACTTGGTAATTAGTAGTCATTTATCTGATGACTTTGACC
TTTCATGATCTCatcgagtctgctaaatcgcgtgccagcgtgcctacgTG
CCATGCGTGCCTACGTGCCATGCGTGCCTGCGTGCCAAGCATGCCAACGT
GCCTGCGTGCCAAGCATGCCAACGTGCCatggcgtgccagcgtgccaacg
tgccagcatgccatccaaatttggcgtgccatccgaacttcggcgtgcca
tccgaattttggcgtgccatccgaattttggcgtgccatctgaattttgg
cgtgccatccgaattttggcgtgccatccgaattttgggcATTATCACAA
AATATGAGGTGTATACACCAACAATGCTGGCGGTGCAAATGGATATAGAT
TGTCatgcaatgaaaacattaaatgctccaagagagctgtttcagagata
tgaaaatattagtacttttattattattttattatttttatttttatatg
aacagagcattacataactttaaaagttttgaagNATCGATTTCAATCCA
ATAAttaaaaaagtgttttatttgaataccttaaaggaactaATTTGAGC
GAGAACTAAATTTGAGCGAGAACTAAATTTgagcgagaactaatttttag
cgagaactaatttttgcgagcAGCANATCCAATAAttaaaaaagtgtttt
atttgaataccttaaaggaactaATTTGAGCGAGAACTAAATTTGAGCGA
GAACTAAATTTgagcgagaactaatttttagcgagaactaatttttgcga
gcAGCACGATTAGCCTTTTTCTTGACAACTAATTTTGTGGAATTTTGTAG
AACTGCAGTTATCCCAAAATTAGGTTCCTGAAGGTAATTAttaattttaa
atgattttatttatattttataacaATTTATAGCCTAGATACCACTCACT
TGATTTATACTGAAAGAAATATTAGATATTATACACTGTTTGGAAAGCGG
AACTGTCTCAATGAATAATCCTAAGTATTTAACCAATGCGATGAACTCAT
TTTGGggaatattaacaaaattgcAGCCTCGCCAAATCTAGATCTCGTCA
GAATTTTGTTTCCCTGAGGTAATTATTGATTTGTGATTCATTGTGATTTT
AACAGGAGCGATAGCTGAGTGGTAAAGTCAACTgttcgcggttcgaatcc
ccACTTACTTAAATGTTCAGCTCACTGCCTGTAGACCCTAAAAGTTTTAG
GTTACTGGGCTATCCATGTGAAATATCGACTCTTTCCATGTGAGCATTCT
CtctttgcttcttgctccacactATCCAAATTTTATAAATAGTAGAGAAA
GGAATTTGATACCTTGATAATTATCTTGTAGAAGATTCTGTATTTTGATA
TATTATATATTGTATATCATGCAATTTGAATCAATATTACAAttgatatt
catttttttcagaaaaaaaaaattcttttgttgaaaTGGCTCAAAGTACA
GCTCAAGCAAATAAGTCTAAAGCAATCACGCTTAAAGGAAGTGCTGAACT
TATTGGAGAATTtttcggtaagtcattcagtgcGTACAGTCTTTTATTTG
AAACATTCTATCCTTGAAACCATCATACCTCACCTActtttttcgatttc
tttaatGGCACCCACCATGAGGATTTCTTATACCCTATTGTGTAAATTTC
TATTCTCATTCTATTATAAtattttcgcttgtttttcaatttttcttttg
tcttttttttagaATACGGTGTGAATTGGTAAGACTTGTAATTTatccat
tttcattttattgagTCATTATACTTGGTAATTAGTAGTCATTTATCTGA
TGACTTTGACCTTTCATGATCTCatcgagtctgctaaatcgcgtgccagc
gtgcctacgTGCCATGCGTGCCTACGTGCCATGCGTGCCTGCGTGCCAAG
CATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNtggcacgctggcacgccaagaca
gttgacacgaaggcacgcatggcacgctggcacgcttAAAAACCGATGGC
ACgcgtggcacgcgatttagcagactcgatCTCATCGCATCGCATCATGA
CTATAAATTTCTTGCAAATAGACCTATTcaaaaattacgtcacgaacatc
acttgcctcgtatccaaacaattaccatggtgattatgtcccttgaggca
tgattttttttatgaatagaaagtagttttaagaaaacccgctgggagtt
aatcaccatggcaatttttttatttcaaaacgaggcaagtgttgttcgtg
acgtaatttatgaaaaggtctatacccAAACAAAATTGGTTGATTGTAGC
GAAATTTATTGGTTGAATGTTTTTGCATATGAGATAATGTCGTATTTGTG
GAAATCGAAGTATTTTGTAATGGCAGTGAATAAATTGTTCCTGTGTTAAT
CCCAATTTACTGACAGTAATCACAATATTACCAAACCTTTATATTGTTCA
ATAGTATCCTCTTTCAACGAGGTTTATATCCTATGGAATCGTTCGATCGC
AAGATTGCTTACGATGTGCCCGTTTTCGTTTCTACCAACACTGATTTGAA
TGATTATCTACACAAGTGCATCGAACAAATGAAAGGTTTTTGGtactttc
ttattttgatttcaattctttgacAGTTTTATTCTTAGAAAAATGAACTT
CATGGCCTTACCTGGAGATCTACTTTGTCTGGTAGCGGGATGGGAGGGAC
GGGAATAGAGATAATATGGTTTTGCTGCTTCATTAccaggaaaaaaaata
aaaaaaataggcGAGCTAAAAACGAGTGcgttttttttagctgaaaaaaa
attgtgaggTAAAAAAGGGAAGAGCGCTAAAATTTACGATCTGAAGAGCT
TTagaattttaagaaatatatatcccattttttttttttcattaccaGAT
TGGTTAGTAAAGAAGACGATTCAAAGGATTGTATTGGTGATCACTTCAGT
TGCCAAGAAAGTGGACGTTGAACGTTGGACATTCAACATCGAATGTGATA
AAACTGCTAATGAAAGCACGTAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016734TCONS_00016734Clytia hemisphaericatranscript
TCONS_00016735TCONS_00016735Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000248supercontigsc0000248:393270..398043 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
38.01	33.88	96.43	102.76	14.05	5.48	15.68	15.76	24.37	20.71	12.2	10.94	9.11	12.04	12.78	13.69	24.58	21.09	0	3.24	11.05	6.99	17.91	25.23	20.27	40.56	7.55	8.45	11	16.05