XLOC_008009 (gene) - C. hemisphaerica

Overview
NameXLOC_008009
Unique NameXLOC_008009
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000185:316169..323437-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008009 ID=XLOC_008009|Name=XLOC_008009|organism=Clytia hemisphaerica|type=gene|length=7269bp|location=Sequence derived from alignment at sc0000185:316169..323437- (Clytia hemisphaerica)
CATGAGAATTAGTTTTCCGTTTGTTATGAAGAGACAGACATTTTTGTCTT AATTGCGTCAAAAGGTGTTCTTTATCACTTCTACCAATGTTAATAAGCTA GATGATAAAATTATATTTATGATTTTTTTGAAAACTGATTGTGTTTGGTC GTTCTCTTTGTAGAAAAAAACTTTAAATTTTAAGAATAAAGTTAAAAAAC AATATGGCAGCTTCCTCTTGTTCCAAGGAATTTGTTGTTGGTGGCAGATA TAAATTGATCCGCAAAATTGGAAGTGGATCTTTTGGTGACATTTATCTTG CACTTAATCTCACCAATGGCGAGGTATAACTTTGTTGTTTTGTTCAAAAT AATCATGACTTTTGAAATACCTGAAATGGAAATTATATGATAAAATGGAA ATTATGTGATAAAATGAATCTTAACAAAATCAAACATAGCATTTCTTGAC AATTAATTAGAATCATTATGTTGAGCACTGTTAGTGACTACATCGATTCC ACCATGCACTGTGGATTAGGAGAAGAGTGGGCTAATTGTTGACATAGAAA TTAAACTCAGTCAATACAAGTTGGCGGGTAGTATAAACCAAATAGTATTA GACAGTTCTATGAGTACTCGTCTACCGCTACAAAAAGGGTCATACTCATC TTTATCAAAGTTGCATTGTTTTCACTTGTAAACAATCTCTTATTATTTTG TTTAATCCATTTTATAGGAGGTTGCTGTAAAACTTGAATCAACACGAGCC AGACATCCACAATTACTTTATGAATCTAAAGTATATCGTCTATTACAAGG AGGTGTTGGTATACCCCATGTCAGGTGCGACTATGATGTTAAATTTATCA TAATTAATGTGGATTTTGTAAAGATATAACAAAATATGGTATAAGGCTCA ATTTCATTTAATTAAAGATTCTAACGAATATCTCTAGAAATCTAGAGATT TTGATCCACTAGGATAAAGCATTTTTAATGGCTCGAATGGGATGGGTTAT ATAATGATGTCATAAGGGGGAAATGCGTGAAATATTAATTTTAGGAAGAT CTACTCTTTGATTTATCTGAAATGTTCTATCTATCAGGTGGTTTGGACAA GAAAAAGATTACAATGTCCTAGTGCTTGATTTACTGGGGCCAAGTTTGGA AGATCTTTTCAACTTCTGCTCAAGGAGGTTTACTATGAAGACAGTTCTCA TGTTAGCAGATCAGGTAAGAATATTTTTAGTCTTATGTGTTTTTTTTGAA AAGTTACAGATTATAGATTTCAATTAAATTCTTATCGCTTTTAGGAATGT ACACTATGGTATATAGTTTAGTTGAAGTCTTCAAGCTCAATTCCATATAA ACTGCCAGTTTATTCTCTATTTCCATATTATTCTATATCACGTTCCCAGA CATGATTTTGTTTTTTTTCTCTTTATAGATGATTGGTCGGATAGAATACG TACAGAATAAGAATTTCATACACAGAGATATAAAGCCAGACAATTTCCTG ATGGGCATTGGAAGGCACTGTAACAAAGTAAGTGGAACAGAATCCCTTGA AGAACTTATCCCTTTATTCGTTGATGGCAAAAGGTTTTTGTTAAACTAGT GTATATGTATAAGAATTGCGAAGCGATCCAGGCAAGTCACTCGATTCGCA AGTTGCAAGCAAAATATTTATAGGGTTACACACTAGAAATTGCAAGTTAA ATAGATTCATAATCAATTCGTAAATTTAAACCCCGCGAAACCCCGCCAAC TGCTCATGTTCAGGAAGACCGAGCCTCTTTAGAGAGAGACACCCAAACAC TTCAGGTGTGCAAACTTACGACGTTTACTTCTACGGATTCGAGGAAAATT ATATGATTTCTTTCATGAATCGTTGTGAAAAGTTCAATAATCATTTGTCC GCCCTGAGCCTTGAGTATTTTTATTTCTTAGTTTTTGTTTTAGACTCNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNACATGTCAATGTTCTATTTCTCTGATCACCAATGCGTATTCAT AAACAACAAACAACAACCAAAGATCCCACATCATTGAGGGTCAGTCAAGC CAAAATTTCATAAACAACGACAAACAAACATTTCTCCTTCTACTGAATAA GGGAGGAATAAATTCTTCCAGGTTAGCCATACCCAAAAGCGCAAAATATT TTTGTTCCCATCAAATCAAAATAGATAGTCCAGCACTTCAACATACTACC AAGATTCAATCTAAACCAAAAGCCAAAAGGAATGGCTTTCCCACCATATG TATAGAGTTCATTTCTTCAGCTTAGATCCTCTTCTTGCAATGTCCATGAA AGAATAAAAGTTCCATCTTCTTTCTTCTCATTCCGCAAGTTCAGCTGCTT CCTTCGTTTCTTTTCATCAAGCACCATCTCTTTTCAAAACACCAATTTTT CTTTTCAAAACAATGTTGTTTTTAGTCAACATTCGAATTTGGAAAAGTTT GAAAGCCATTCGAAAGTCTTTGCTCGAGTCAATGCAATGACTTCTTGAAA AAAGAGCGCCATTGGAACGCTTCTTGAACGCTTCCAGTCCGCGCTGATTT TCCGACCTTTTCTTTAGATTTCCTAATTTAAACCTTAAGGAGATAAAAAC AAGGCTTATCTAGTACCGGTAACCCCGTGTATTATCTCCGTAGCTTTTAA GAATTGGTATATCTAAACGCACGAGGCGACACTTTTTGAAAAAAACGAAT TTAACCATCCGTAATTCCAGGTCTCTCCNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTAATTTTT CATTTGCGCTCCCCAGCGTAGGTGAGATTTAAAGGTACATATACACGATA GCAAAACTGCTTCGCTCATGTATATTCGCTTCGCAATAAGCATAGTTTTA AAATATCAATAATTTCCAACCTGAATGTGTGTATGTTTAAAAACTAGAAT GGATTTAGAAATATGTACTATATAACCAAAACTACCTTCATTATTATCTT AATAGGTCTACCTGATTGATTTTGGTCTAGCCAAGAAATACAGAGAGAAT CACACCAAACAACACATCCCATACAGGGAGGACAAGAATCTGACAGGAAC AGCGCGCTATGCCAGTATAAATGCACATCTGGGAATAGAACAAGCGTAAG TTATAACTGTTATTGAAAGTTGGCCCAGAAGGGTACAGTTGCAGTGTACT GACCCATAGCTAGGTGGTTGTGTCTAATTTTGAATCTTTAAAAATGTTAG TACTTAGTATTAGATTTCGGGGTGGGGACGGGTATATCTCTCATTTGAAG CTAGTACCATGTACTTAATTGGTTTTTTTGGTGGGTAAAATGGGTAATGA TTTCCCAATTTCGGCAAATCAGAACGGAATTTTTTTTGAAAGAAATTTCT GAAAATAATCAGATTTCATTAAACAGGAAAATATTTTTTCATTTTCTGAT TACGAAAAAAAAAATTATTGAAGAAAACCCAGGAAAACCTGTCAGCTTTC CCACATTTGGTAAGGTGAAATTGTAAATAGGGAGGGGGGTCCCTTTTTTC CTCAACAAAAGGTAGTACCATATACTAAACTAGAAGTTGATATGTAATTC CTTTAGGCGGAGAGACGATATGGAGTCCCTTNTACTAAACTAGAAGTTCA TATGTAATTCCTTTAGGCGGAGAGACGATATGGAGTCCCTTGGATATGTA TTAATGTATTTCAACCGATCAAGTCTTCCTTGGCAAGGTCTTAGGGTAAG TTTTCGTTTTTGAAATTTCGGATTTGGATCGATTCTATTCCTGAAGCCAA AGAGTAAAAGCGTTCGATGCATATTATGTGATTTATTTTCTCGAATTGTA GTATTCGATGGCTTGAGGTGTAACAAACACTTTTCTCCCTCTTATGGACT TCAGAAGAAACTGGAAGAAATTGTTGTATTTTGGGTGCAAACTATAATTA TGGTGCGAACTTTATTATGTTTCATAAAAAAGCCTCAAACTAAATATTCT ATAAATTCTCTATTTTAAAATGTCATTAGGCTGCAACGAAAAAGCAAAAG TACGAGAAAATTAGCGAAAAGAAAATGTCGACACCTATTGAAGCTTTATG CAAGGTAAGATAAATCTTTGTTTATTGGGTAAAATATCCAGTGGACCTGT GCTTGGCTATGTCTGTCAGCTCGAGGTTTAGAAGGGTTTAACTAGTGTCT CCAGGGGACCTTGAAAAGTTTATAAACCTTGAACACTTTGTATTTTCTGA AAACCTTGAGTATGATTTTCATAGCAGTTACGTTAATCGAATGTTCATAA GATTTGGGACTGTTTTTATTTGCAAATATTTTTCGCTCGCAGTCGATCAA GGTTTTGTAAGTTTGAGTTTTTGAAAACCTCGAAAACCTTGGAGCCAAAG AAATGAATTCCGTAGACACAAATAAAGTCGCCAGCTTTAAAAACTTGGCT GTAATTAATCGTTTTCCAGAAGATTGAGTTCAAGAACTTGGTTTCTTTTT TTATGACTAGGGCTTCCCGGCCGAGTTTGCCATGTATTTGAATTATTGTC GTGGTTTACGATTCGAAGAAATGCCCGACTACATGTACCTCCGACAACTT TTCCGTATCCTTTTCCGAACATTAAACCACCAATATGATTACGTCTTTGA TTGGAGTATGCTGAAACAGAAAGCTGCTGCCAACACTATGCAATTCAACT CTACCGCTCCCAACGTTTCAATGGCAAAAGGGCCAGAGGAAAGAATGAAG AGGAAAGGTACAAAGGGTCATTGACTAGACGCAGCCAATAACAAACGGTA AGCTTTAACAATTTATTCCACCTTGCTTGGGCTACTTTACATTGTATTAT ATTATATGTAAGACGTTTAAAAACTTAATCTTAAAAATTTTCAGAAAGTC ACCTCGCAAGAGAAAGTCAACTTTACGTTATAGCCTATACTAGACGTAAC CCGCGTTTTTTTCTACGTAATTAACGTCTGGTCCACTCTGCGACTTTTTC GAATGTTTGGAGCCCAGGTTCTCGAGCTCCAAACATTCGATTTTTTGACG TCACTTTTAACTTCCGAAGCTCCTGCAGTAGCGAAAAAATCGAATTTGCG TCAAAGCACTTGAAGGGCTTCTATTTTTCAAAAATCGTCAAAGTGGAACT CACTAAGAAACTGAATGAAAAATCCCGGTTTTTGGTAAGGGGCTCGCTAA TTCTACGTTTGCCCTCAACATCAGTCGACACTTAGAAGTTTCTAAGATAA AAGTACTGATTGGAAGAAAAAAAACGTTCTCAAACATAACTTCGATGTGT TCGATGCACTTGGCTGTCTTTTGCAAGGTGACTTTACCATTATAAGTTAA AACTTGTTGTGGTTTTCCAGAATTACCCCGAAATTGGAAAGCCTCGCAAA GAAATGTTGATGGAACATTACCTGCTGTTAGCGTCTGGATTGGTTGAAAC ATTTGATAACCTTTGTTTTTATAAAATTTTCAATCAATAGACCTTTTCAT AAACTACGTCACGAAAATCACTTGCCTCGTTTTGAAATTATTGCCATGGT GATTGACTACCAGCGGATTTTATTAAAACTACTTTCTATTCATAAAAAAT CATTTAATGTCTCAAGGGATATGATCCCCATGGAAATTGTTTGAATGCGA GGCATGTGATGTTTTGTCTATTGGTTGAAACATTTGATAACCTTTGTTTT TATGCAAACTTTCAATCGATTAGTATTTTATTCTTTCGAAATAATTTTTT TTCCCGCAAACAACTGCAAACAAGAGCATTAATTTAGTATTTTTTTTCTT GTTTAGAACAAAGCCAGATGATAAAGATGTCTGAATTTAAAACCACGTTG GATCAAAGAAACAATTAAAACGAAGTATTTTTTTCATAAAAATACGGTTA TTTGAATGGATGGAAATTCCTGAAGAATTATTTTTATTGGCTCATTTGTT TTTGGTTGTTATGTGGTGGAGTTTTGATAGAGAAGACGGAGAAATTTTAG TTAGAAGTTCGGCCAGAGTGGCTTCATGATTTGTGATCGTGACAGAAGTA TAAAAAAATTTGGAAAAATACGTAATTGTGTGTTTTGCCATGACATCTAT TGGAGAAATTATAAACCCATGTTTTCATTTTCTTACTTGATAAAAAAATT AATTTTATTTTGCTGCTAACGTTGTTGGAGAAACAGATGTTCGAAAAAAT CGCATTATATCCAAGTTTTCATCTCTTTTTTGGTTTGATCATAGACCGAG ATTGATGTTGGATGATAATACAGAAAAGTATGGATTAAATATGGGTTGAT GACTCAAAATGTATTTAAATATGTGTTAAAATATTCAAAAATATGAAATT TTCAAAATATGTATCTTTTCTCATTAAAAACAGTCAGGTGTAAGACGCTG CCGACTGAAAAAAAAATAGGAGTTAAGTAATTGCCAAAAAGCTTTTCTTC GGGTAAAAATTAAGTATCCCTTTTTCCAGATTTACTCTACTTTCTTAATT CGTTGAATTGAATGGATACCAAAAGTGTATTAATGTTGATATCACGGTTA CCATTCTCCATCCTTCCTTCCTTCCTCGACTTTCTGAGTAAACAATATGG TTCAGAGTGCTTATACTTTTAAGATTTTTTATAACATCAAATTTTTTAAT CTTTTAAGTGTTCACTCACCATTTTTAACAAATAAAATATAGTAATTTTA TTTTAAAGTTTAGTTCTACTTCAGAAAATTTAAAGGAAACCATAAATGAC GAGAGTCACAACATATCCTTTTTTTGTTATTACCAATTTATATTATCGTA ATTTATGAGAGTTTTTTTTTTGGAATGAAATATCTCTTTACTGACCTTAT TTGTAAAAAAACTGTTCCCTATGTTAGATTGTATAAGTTGACCAATATAC TTTTTTTATAAAAAAGGAATAAGAATTGTTGTTGTTTTTATACGTGTCGA AACCATTGAAAAATGTGCAATAAAGTTCGAATTAGCCGATGATTTATATG TCAACTAACCGGTCATCGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00014328TCONS_00014328Clytia hemisphaericatranscript
TCONS_00014327TCONS_00014327Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00014328-proteinTCONS_00014328-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000185supercontigsc0000185:316169..323437 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CSNK1A1casein kinase I isoform alpha isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
69.88 69.03 45.35 46.91 207.92 152.76 135.82 142.94 102.22 107.91 81.66 80.53 76.13 74.33 66.21 67.38 104.9 101.35 75.7 101.68 113.99 115.3 121.14 125.84 88.49 94.66 173.55 145.42 116.71 124.01