TCONS_00014327 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014327
Unique NameTCONS_00014327
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2472

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014327 ID=TCONS_00014327|Name=TCONS_00014327|organism=Clytia hemisphaerica|type=transcript|length=2472bp
CATTTTTGTCTTAATTGCGTCAAAAGGTGTTCTTTATCACTTCTACCAAT
GTTAATAAGCTAGATGATAAAATtatatttatgatttttttgaaaactga
tTGTGTTTGGTCGTTCTCTTtgtagaaaaaaactttaaattttaagaata
aagttaaaaaacaaTATGGCAGCTTCCTCTTGTTCCAAGGAATTTGTTGT
TGGTGGCAGATATAAATTGATCCGCAAAATTGGAAGTGGATCTTTTGGTG
ACATTTATCTTGCACTTAATCTCACCAATGGCGAGGAGGTTGCTGTAAAA
CTTGAATCAACACGAGCCAGACATCCACAATTACTTTATGAATCTAAAGT
ATATCGTCTATTACAAGGAGGTGTTGGTATACCCCATGTCAGGTGGTTTG
GACAAGAAAAAGATTACAATGTCCTAGTGCTTGATTTACTGGGGCCAAGT
TTGGAAGATCTTTTCAACTTCTGCTCAAGGAGGTTTACTATGAAGACAGT
TCTCATGTTAGCAGATcagATGATTGGTCGGATAGAATACGTACAGAATA
AGAATTTCATACACAGAGATATAAAGCCAGACAATTTCCTGATGGGCATT
GGAAGGCACTGTAACAAAGTCTACCTGATTGATTTTGGTCTAGCCAAGAA
ATACAGAGAGAATCACACCAAACAACACATCCCATACAGGGAGGACAAGA
ATCTGACAGGAACAGCGCGCTATGCCAGTATAAATGCACATCTGGGAATA
GAACAAGCGCGGAGAGACGATATGGAGTCCCTTNTACTAAACTAGAAGTT
CATATGTAATTCCTTTAGGCGGAGAGACGATATGGAGTCCCTTGGATATG
TATTAATGTATTTCAACCGATCAAGTCTTCCTTGGCAAGGTCTTAGGGCT
GCAACGAAAAAGCAAAAGTACGAGAAAATTAGCGAAAAGAAAATGTCGAC
ACCTATTGAAGCTTTATGCAAGGGCTTCCCGGCCGAGTTTGCCATGTATT
TGAATTATTGTCGTGGTTTACGATTCGAAGAAATGCCCGACTACATGTAC
CTCCGACAACTTTTCCGTATCCTTTTCCGAACATTAAACCACCAATATGA
TTACGTCTTTGATTGGAGTATGCTGAAACAGAAAGCTGCTGCCAACACTA
TGCAATTCAACTCTACCGCTCCCAACGTTTCAATGGCAAAAGGGCCAGAG
GAAAGAATGAAGAGGAAAGGTACAAAGGGTCATTGACTAGACGCAGCCAA
TAACAAACGaACAAAGCCAGATGATAAAGATGTCTGAATTTAAAACCACG
TTGGAtcaaagaaacaattaaaacgaagtatttttttcataaaaatacgG
TTATTTGAATGGATGGAAATTCCTGAAGAATTATTTTTATTGGCTcattt
gtttttggttgttatGTGGTGGAGTTTTGATAGAGAAGACGGAGAAATTT
TAGTTAGAAGTTCGGCCAGAGTGGCTTCATGATTTGTGATCGTGACAGAA
gtataaaaaaatttggaaaaatacgTAATTGTGTGTTTTGCCATGACATC
TATTGGAGAAATTATAAACccatgttttcattttcttacttgataaaaaa
attaattttattttgctGCTAACGTTGTTGGAGAAACAGATGTTCGAAAA
AATCGCATTATATCCAAGTTTTCATCTCTTTTTTGGTTTGATCATAGACC
GAGATTGATGTTGGATGATAATACAGAAAAGTATGGATTAAATATGGGTT
GATGACTCAAAATGTATTTaaatatgtgttaaaatattcaaaaatatgaa
attttcaaaatatgtatCTTTTCTCATTAAAAACAGTCAGGTGTAAGACG
CTGccgactgaaaaaaaaataggaGTTAAGTAATTGCCAAAAAGCTTTTC
TTCGGGTAAAAATTAAGTATCCCTTTTTCCAGATTTACTCTACTTTCTTA
ATTCGTTGAATTGAATGGATACCAAAAGTGTATTAATGTTGATATCACGG
TTACCATTCTCCATCCTTCCTTCCTTCCTCGACTTTCTGAGTAAACAATA
TGGTTCAGAGTGCTTAtacttttaagattttttataacatcaaatttttt
aatcttttaagtGTTCACTCAccatttttaacaaataaaatatagtaatt
ttattttaaagtttaGTTCTACTtcagaaaatttaaaggaaaccATAAAT
GACGAGAGTCACAACATATCCTTTTTTTGTTATTACCAATTTATATTATC
GtaatttatgagagttttttttttggaatgaaATATCTCTTTACTGACct
tatttgtaaaaaaactgTTCCCTATGTTAGATTGTATAAGTTGACcaata
tactttttttataaaaaaggaataagaattgttgttgtttttatacGTGT
CGAAACCATTGAAAAATGTGCAATAAAGTTCGAATTAGCCGATGATTTAT
ATGTCAACTAACCGGTCATCGG
Run BLAST on NCBI

transcript from alignment at sc0000185:316169..323399-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014327 ID=TCONS_00014327|Name=TCONS_00014327|organism=Clytia hemisphaerica|type=transcript|length=7231bp|location=Sequence derived from alignment at sc0000185:316169..323399- (Clytia hemisphaerica)
CATTTTTGTCTTAATTGCGTCAAAAGGTGTTCTTTATCACTTCTACCAAT GTTAATAAGCTAGATGATAAAATTATATTTATGATTTTTTTGAAAACTGA TTGTGTTTGGTCGTTCTCTTTGTAGAAAAAAACTTTAAATTTTAAGAATA AAGTTAAAAAACAATATGGCAGCTTCCTCTTGTTCCAAGGAATTTGTTGT TGGTGGCAGATATAAATTGATCCGCAAAATTGGAAGTGGATCTTTTGGTG ACATTTATCTTGCACTTAATCTCACCAATGGCGAGGTATAACTTTGTTGT TTTGTTCAAAATAATCATGACTTTTGAAATACCTGAAATGGAAATTATAT GATAAAATGGAAATTATGTGATAAAATGAATCTTAACAAAATCAAACATA GCATTTCTTGACAATTAATTAGAATCATTATGTTGAGCACTGTTAGTGAC TACATCGATTCCACCATGCACTGTGGATTAGGAGAAGAGTGGGCTAATTG TTGACATAGAAATTAAACTCAGTCAATACAAGTTGGCGGGTAGTATAAAC CAAATAGTATTAGACAGTTCTATGAGTACTCGTCTACCGCTACAAAAAGG GTCATACTCATCTTTATCAAAGTTGCATTGTTTTCACTTGTAAACAATCT CTTATTATTTTGTTTAATCCATTTTATAGGAGGTTGCTGTAAAACTTGAA TCAACACGAGCCAGACATCCACAATTACTTTATGAATCTAAAGTATATCG TCTATTACAAGGAGGTGTTGGTATACCCCATGTCAGGTGCGACTATGATG TTAAATTTATCATAATTAATGTGGATTTTGTAAAGATATAACAAAATATG GTATAAGGCTCAATTTCATTTAATTAAAGATTCTAACGAATATCTCTAGA AATCTAGAGATTTTGATCCACTAGGATAAAGCATTTTTAATGGCTCGAAT GGGATGGGTTATATAATGATGTCATAAGGGGGAAATGCGTGAAATATTAA TTTTAGGAAGATCTACTCTTTGATTTATCTGAAATGTTCTATCTATCAGG TGGTTTGGACAAGAAAAAGATTACAATGTCCTAGTGCTTGATTTACTGGG GCCAAGTTTGGAAGATCTTTTCAACTTCTGCTCAAGGAGGTTTACTATGA AGACAGTTCTCATGTTAGCAGATCAGGTAAGAATATTTTTAGTCTTATGT GTTTTTTTTGAAAAGTTACAGATTATAGATTTCAATTAAATTCTTATCGC TTTTAGGAATGTACACTATGGTATATAGTTTAGTTGAAGTCTTCAAGCTC AATTCCATATAAACTGCCAGTTTATTCTCTATTTCCATATTATTCTATAT CACGTTCCCAGACATGATTTTGTTTTTTTTCTCTTTATAGATGATTGGTC GGATAGAATACGTACAGAATAAGAATTTCATACACAGAGATATAAAGCCA GACAATTTCCTGATGGGCATTGGAAGGCACTGTAACAAAGTAAGTGGAAC AGAATCCCTTGAAGAACTTATCCCTTTATTCGTTGATGGCAAAAGGTTTT TGTTAAACTAGTGTATATGTATAAGAATTGCGAAGCGATCCAGGCAAGTC ACTCGATTCGCAAGTTGCAAGCAAAATATTTATAGGGTTACACACTAGAA ATTGCAAGTTAAATAGATTCATAATCAATTCGTAAATTTAAACCCCGCGA AACCCCGCCAACTGCTCATGTTCAGGAAGACCGAGCCTCTTTAGAGAGAG ACACCCAAACACTTCAGGTGTGCAAACTTACGACGTTTACTTCTACGGAT TCGAGGAAAATTATATGATTTCTTTCATGAATCGTTGTGAAAAGTTCAAT AATCATTTGTCCGCCCTGAGCCTTGAGTATTTTTATTTCTTAGTTTTTGT TTTAGACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNACATGTCAATGTTCTATTTCTCTGATCACCA ATGCGTATTCATAAACAACAAACAACAACCAAAGATCCCACATCATTGAG GGTCAGTCAAGCCAAAATTTCATAAACAACGACAAACAAACATTTCTCCT TCTACTGAATAAGGGAGGAATAAATTCTTCCAGGTTAGCCATACCCAAAA GCGCAAAATATTTTTGTTCCCATCAAATCAAAATAGATAGTCCAGCACTT CAACATACTACCAAGATTCAATCTAAACCAAAAGCCAAAAGGAATGGCTT TCCCACCATATGTATAGAGTTCATTTCTTCAGCTTAGATCCTCTTCTTGC AATGTCCATGAAAGAATAAAAGTTCCATCTTCTTTCTTCTCATTCCGCAA GTTCAGCTGCTTCCTTCGTTTCTTTTCATCAAGCACCATCTCTTTTCAAA ACACCAATTTTTCTTTTCAAAACAATGTTGTTTTTAGTCAACATTCGAAT TTGGAAAAGTTTGAAAGCCATTCGAAAGTCTTTGCTCGAGTCAATGCAAT GACTTCTTGAAAAAAGAGCGCCATTGGAACGCTTCTTGAACGCTTCCAGT CCGCGCTGATTTTCCGACCTTTTCTTTAGATTTCCTAATTTAAACCTTAA GGAGATAAAAACAAGGCTTATCTAGTACCGGTAACCCCGTGTATTATCTC CGTAGCTTTTAAGAATTGGTATATCTAAACGCACGAGGCGACACTTTTTG AAAAAAACGAATTTAACCATCCGTAATTCCAGGTCTCTCCNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNAGTAATTTTTCATTTGCGCTCCCCAGCGTAGGTGAGATTTAAAGGTAC ATATACACGATAGCAAAACTGCTTCGCTCATGTATATTCGCTTCGCAATA AGCATAGTTTTAAAATATCAATAATTTCCAACCTGAATGTGTGTATGTTT AAAAACTAGAATGGATTTAGAAATATGTACTATATAACCAAAACTACCTT CATTATTATCTTAATAGGTCTACCTGATTGATTTTGGTCTAGCCAAGAAA TACAGAGAGAATCACACCAAACAACACATCCCATACAGGGAGGACAAGAA TCTGACAGGAACAGCGCGCTATGCCAGTATAAATGCACATCTGGGAATAG AACAAGCGTAAGTTATAACTGTTATTGAAAGTTGGCCCAGAAGGGTACAG TTGCAGTGTACTGACCCATAGCTAGGTGGTTGTGTCTAATTTTGAATCTT TAAAAATGTTAGTACTTAGTATTAGATTTCGGGGTGGGGACGGGTATATC TCTCATTTGAAGCTAGTACCATGTACTTAATTGGTTTTTTTGGTGGGTAA AATGGGTAATGATTTCCCAATTTCGGCAAATCAGAACGGAATTTTTTTTG AAAGAAATTTCTGAAAATAATCAGATTTCATTAAACAGGAAAATATTTTT TCATTTTCTGATTACGAAAAAAAAAATTATTGAAGAAAACCCAGGAAAAC CTGTCAGCTTTCCCACATTTGGTAAGGTGAAATTGTAAATAGGGAGGGGG GTCCCTTTTTTCCTCAACAAAAGGTAGTACCATATACTAAACTAGAAGTT GATATGTAATTCCTTTAGGCGGAGAGACGATATGGAGTCCCTTNTACTAA ACTAGAAGTTCATATGTAATTCCTTTAGGCGGAGAGACGATATGGAGTCC CTTGGATATGTATTAATGTATTTCAACCGATCAAGTCTTCCTTGGCAAGG TCTTAGGGTAAGTTTTCGTTTTTGAAATTTCGGATTTGGATCGATTCTAT TCCTGAAGCCAAAGAGTAAAAGCGTTCGATGCATATTATGTGATTTATTT TCTCGAATTGTAGTATTCGATGGCTTGAGGTGTAACAAACACTTTTCTCC CTCTTATGGACTTCAGAAGAAACTGGAAGAAATTGTTGTATTTTGGGTGC AAACTATAATTATGGTGCGAACTTTATTATGTTTCATAAAAAAGCCTCAA ACTAAATATTCTATAAATTCTCTATTTTAAAATGTCATTAGGCTGCAACG AAAAAGCAAAAGTACGAGAAAATTAGCGAAAAGAAAATGTCGACACCTAT TGAAGCTTTATGCAAGGTAAGATAAATCTTTGTTTATTGGGTAAAATATC CAGTGGACCTGTGCTTGGCTATGTCTGTCAGCTCGAGGTTTAGAAGGGTT TAACTAGTGTCTCCAGGGGACCTTGAAAAGTTTATAAACCTTGAACACTT TGTATTTTCTGAAAACCTTGAGTATGATTTTCATAGCAGTTACGTTAATC GAATGTTCATAAGATTTGGGACTGTTTTTATTTGCAAATATTTTTCGCTC GCAGTCGATCAAGGTTTTGTAAGTTTGAGTTTTTGAAAACCTCGAAAACC TTGGAGCCAAAGAAATGAATTCCGTAGACACAAATAAAGTCGCCAGCTTT AAAAACTTGGCTGTAATTAATCGTTTTCCAGAAGATTGAGTTCAAGAACT TGGTTTCTTTTTTTATGACTAGGGCTTCCCGGCCGAGTTTGCCATGTATT TGAATTATTGTCGTGGTTTACGATTCGAAGAAATGCCCGACTACATGTAC CTCCGACAACTTTTCCGTATCCTTTTCCGAACATTAAACCACCAATATGA TTACGTCTTTGATTGGAGTATGCTGAAACAGAAAGCTGCTGCCAACACTA TGCAATTCAACTCTACCGCTCCCAACGTTTCAATGGCAAAAGGGCCAGAG GAAAGAATGAAGAGGAAAGGTACAAAGGGTCATTGACTAGACGCAGCCAA TAACAAACGGTAAGCTTTAACAATTTATTCCACCTTGCTTGGGCTACTTT ACATTGTATTATATTATATGTAAGACGTTTAAAAACTTAATCTTAAAAAT TTTCAGAAAGTCACCTCGCAAGAGAAAGTCAACTTTACGTTATAGCCTAT ACTAGACGTAACCCGCGTTTTTTTCTACGTAATTAACGTCTGGTCCACTC TGCGACTTTTTCGAATGTTTGGAGCCCAGGTTCTCGAGCTCCAAACATTC GATTTTTTGACGTCACTTTTAACTTCCGAAGCTCCTGCAGTAGCGAAAAA ATCGAATTTGCGTCAAAGCACTTGAAGGGCTTCTATTTTTCAAAAATCGT CAAAGTGGAACTCACTAAGAAACTGAATGAAAAATCCCGGTTTTTGGTAA GGGGCTCGCTAATTCTACGTTTGCCCTCAACATCAGTCGACACTTAGAAG TTTCTAAGATAAAAGTACTGATTGGAAGAAAAAAAACGTTCTCAAACATA ACTTCGATGTGTTCGATGCACTTGGCTGTCTTTTGCAAGGTGACTTTACC ATTATAAGTTAAAACTTGTTGTGGTTTTCCAGAATTACCCCGAAATTGGA AAGCCTCGCAAAGAAATGTTGATGGAACATTACCTGCTGTTAGCGTCTGG ATTGGTTGAAACATTTGATAACCTTTGTTTTTATAAAATTTTCAATCAAT AGACCTTTTCATAAACTACGTCACGAAAATCACTTGCCTCGTTTTGAAAT TATTGCCATGGTGATTGACTACCAGCGGATTTTATTAAAACTACTTTCTA TTCATAAAAAATCATTTAATGTCTCAAGGGATATGATCCCCATGGAAATT GTTTGAATGCGAGGCATGTGATGTTTTGTCTATTGGTTGAAACATTTGAT AACCTTTGTTTTTATGCAAACTTTCAATCGATTAGTATTTTATTCTTTCG AAATAATTTTTTTTCCCGCAAACAACTGCAAACAAGAGCATTAATTTAGT ATTTTTTTTCTTGTTTAGAACAAAGCCAGATGATAAAGATGTCTGAATTT AAAACCACGTTGGATCAAAGAAACAATTAAAACGAAGTATTTTTTTCATA AAAATACGGTTATTTGAATGGATGGAAATTCCTGAAGAATTATTTTTATT GGCTCATTTGTTTTTGGTTGTTATGTGGTGGAGTTTTGATAGAGAAGACG GAGAAATTTTAGTTAGAAGTTCGGCCAGAGTGGCTTCATGATTTGTGATC GTGACAGAAGTATAAAAAAATTTGGAAAAATACGTAATTGTGTGTTTTGC CATGACATCTATTGGAGAAATTATAAACCCATGTTTTCATTTTCTTACTT GATAAAAAAATTAATTTTATTTTGCTGCTAACGTTGTTGGAGAAACAGAT GTTCGAAAAAATCGCATTATATCCAAGTTTTCATCTCTTTTTTGGTTTGA TCATAGACCGAGATTGATGTTGGATGATAATACAGAAAAGTATGGATTAA ATATGGGTTGATGACTCAAAATGTATTTAAATATGTGTTAAAATATTCAA AAATATGAAATTTTCAAAATATGTATCTTTTCTCATTAAAAACAGTCAGG TGTAAGACGCTGCCGACTGAAAAAAAAATAGGAGTTAAGTAATTGCCAAA AAGCTTTTCTTCGGGTAAAAATTAAGTATCCCTTTTTCCAGATTTACTCT ACTTTCTTAATTCGTTGAATTGAATGGATACCAAAAGTGTATTAATGTTG ATATCACGGTTACCATTCTCCATCCTTCCTTCCTTCCTCGACTTTCTGAG TAAACAATATGGTTCAGAGTGCTTATACTTTTAAGATTTTTTATAACATC AAATTTTTTAATCTTTTAAGTGTTCACTCACCATTTTTAACAAATAAAAT ATAGTAATTTTATTTTAAAGTTTAGTTCTACTTCAGAAAATTTAAAGGAA ACCATAAATGACGAGAGTCACAACATATCCTTTTTTTGTTATTACCAATT TATATTATCGTAATTTATGAGAGTTTTTTTTTTGGAATGAAATATCTCTT TACTGACCTTATTTGTAAAAAAACTGTTCCCTATGTTAGATTGTATAAGT TGACCAATATACTTTTTTTATAAAAAAGGAATAAGAATTGTTGTTGTTTT TATACGTGTCGAAACCATTGAAAAATGTGCAATAAAGTTCGAATTAGCCG ATGATTTATATGTCAACTAACCGGTCATCGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008009XLOC_008009Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014327-exon-sc0000185-1575043694:323115..323399TCONS_00014327-exon-sc0000185-1575043694:323115..323399Clytia hemisphaericaexon
TCONS_00014327-exon-sc0000185-1575043694:322614..322720TCONS_00014327-exon-sc0000185-1575043694:322614..322720Clytia hemisphaericaexon
TCONS_00014327-exon-sc0000185-1575043694:322224..322350TCONS_00014327-exon-sc0000185-1575043694:322224..322350Clytia hemisphaericaexon
TCONS_00014327-exon-sc0000185-1575043694:321911..322009TCONS_00014327-exon-sc0000185-1575043694:321911..322009Clytia hemisphaericaexon
TCONS_00014327-exon-sc0000185-1575043694:320043..320182TCONS_00014327-exon-sc0000185-1575043694:320043..320182Clytia hemisphaericaexon
TCONS_00014327-exon-sc0000185-1575043694:319443..319581TCONS_00014327-exon-sc0000185-1575043694:319443..319581Clytia hemisphaericaexon
TCONS_00014327-exon-sc0000185-1575043694:319084..319158TCONS_00014327-exon-sc0000185-1575043694:319084..319158Clytia hemisphaericaexon
TCONS_00014327-exon-sc0000185-1575043694:318391..318677TCONS_00014327-exon-sc0000185-1575043694:318391..318677Clytia hemisphaericaexon
TCONS_00014327-exon-sc0000185-1575043694:316169..317381TCONS_00014327-exon-sc0000185-1575043694:316169..317381Clytia hemisphaericaexon
TCONS_00014327-exon-sc0000185-1510915933:323115..323399TCONS_00014327-exon-sc0000185-1510915933:323115..323399Clytia hemisphaericaexon
TCONS_00014327-exon-sc0000185-1510915933:322614..322720TCONS_00014327-exon-sc0000185-1510915933:322614..322720Clytia hemisphaericaexon
TCONS_00014327-exon-sc0000185-1510915933:322224..322350TCONS_00014327-exon-sc0000185-1510915933:322224..322350Clytia hemisphaericaexon
TCONS_00014327-exon-sc0000185-1510915933:321911..322009TCONS_00014327-exon-sc0000185-1510915933:321911..322009Clytia hemisphaericaexon
TCONS_00014327-exon-sc0000185-1510915933:320043..320182TCONS_00014327-exon-sc0000185-1510915933:320043..320182Clytia hemisphaericaexon
TCONS_00014327-exon-sc0000185-1510915933:319443..319581TCONS_00014327-exon-sc0000185-1510915933:319443..319581Clytia hemisphaericaexon
TCONS_00014327-exon-sc0000185-1510915933:319084..319158TCONS_00014327-exon-sc0000185-1510915933:319084..319158Clytia hemisphaericaexon
TCONS_00014327-exon-sc0000185-1510915933:318391..318677TCONS_00014327-exon-sc0000185-1510915933:318391..318677Clytia hemisphaericaexon
TCONS_00014327-exon-sc0000185-1510915933:316169..317381TCONS_00014327-exon-sc0000185-1510915933:316169..317381Clytia hemisphaericaexon
TCONS_00014327-exon-sc0000185-1491911889:323115..323399TCONS_00014327-exon-sc0000185-1491911889:323115..323399Clytia hemisphaericaexon
TCONS_00014327-exon-sc0000185-1491911889:322614..322720TCONS_00014327-exon-sc0000185-1491911889:322614..322720Clytia hemisphaericaexon
TCONS_00014327-exon-sc0000185-1491911889:322224..322350TCONS_00014327-exon-sc0000185-1491911889:322224..322350Clytia hemisphaericaexon
TCONS_00014327-exon-sc0000185-1491911889:321911..322009TCONS_00014327-exon-sc0000185-1491911889:321911..322009Clytia hemisphaericaexon
TCONS_00014327-exon-sc0000185-1491911889:320043..320182TCONS_00014327-exon-sc0000185-1491911889:320043..320182Clytia hemisphaericaexon
TCONS_00014327-exon-sc0000185-1491911889:319443..319581TCONS_00014327-exon-sc0000185-1491911889:319443..319581Clytia hemisphaericaexon
TCONS_00014327-exon-sc0000185-1491911889:319084..319158TCONS_00014327-exon-sc0000185-1491911889:319084..319158Clytia hemisphaericaexon
TCONS_00014327-exon-sc0000185-1491911889:318391..318677TCONS_00014327-exon-sc0000185-1491911889:318391..318677Clytia hemisphaericaexon
TCONS_00014327-exon-sc0000185-1491911889:316169..317381TCONS_00014327-exon-sc0000185-1491911889:316169..317381Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000185supercontigsc0000185:316169..323399 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 1.06841 0 0 0 0 0 0.594757 0 0 0 0.815599 0 0 0 0 0.304589 0 0 0 0 0.71515 0.742658 0.627682 0 0 0 0 0 0.597118
Blast
BLAST of TCONS_00014327 vs. Swiss-Prot (Human)
Match: KC1A (Casein kinase I isoform alpha OS=Homo sapiens GN=CSNK1A1 PE=1 SV=2)

HSP 1 Score: 559.296 bits (1440), Expect = 0.000e+0
Identity = 277/356 (77.81%), Postives = 302/356 (84.83%), Query Frame = 1
Query:  166 MAASSCSK-EFVVGGRYKLIRKIGSGSFGDIYLALNLTNGEEVAVKLESTRARHPQLLYESKVYRLLQGGVGIPHVRWFGQEKDYNVLVLDLLGPSLEDLFNFCSRRFTMKTVLMLADQMIGRIEYVQNKNFIHRDIKPDNFLMGIGRHCNKVYLIDFGLAKKYRENHTKQHIPYREDKNLTGTARYASINAHLGIEQARRDDMESLXLN*KFICNSFRRRDDMESLGYVLMYFNRSSLPWQGLRAATXXXXXXXXXXXXMSTPIEALCKGFPAEFAMYLNYCRGLRFEEMPDYMYLRQLFRILFRTLNHQYDYVFDWSMLKQKAAANTMQFNSTAPNVSMAKGPEERMKRKGTKG 1230
            MA+SS SK EF+VGG+YKL+RKIGSGSFGDIYLA+N+TNGEEVAVKLES +ARHPQLLYESK+Y++LQGGVGIPH+RW+GQEKDYNVLV+DLLGPSLEDLFNFCSRRFTMKTVLMLADQMI RIEYV  KNFIHRDIKPDNFLMGIGRHCNK++LIDFGLAKKYR+N T+QHIPYREDKNLTGTARYASINAHLGIEQ+RR                    DDMESLGYVLMYFNR+SLPWQGL+AATKKQKYEKISEKKMSTP+E LCKGFPAEFAMYLNYCRGLRFEE PDYMYLRQLFRILFRTLNHQYDY FDW+MLKQKAA      +          G +    +   KG
Sbjct:    1 MASSSGSKAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRR--------------------DDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQKAAQQAASSSGQGQQAQTPTGKQTDKTKSNMKG 336          
The following BLAST results are available for this feature:
BLAST of TCONS_00014327 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KC1A0.000e+077.81Casein kinase I isoform alpha OS=Homo sapiens GN=C... [more]
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