Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014327 ID=TCONS_00014327|Name=TCONS_00014327|organism=Clytia hemisphaerica|type=transcript|length=2472bpRun BLAST on NCBI transcript from alignment at sc0000185:316169..323399- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00014327 ID=TCONS_00014327|Name=TCONS_00014327|organism=Clytia hemisphaerica|type=transcript|length=7231bp|location=Sequence derived from alignment at sc0000185:316169..323399- (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2 Blast
BLAST of TCONS_00014327 vs. Swiss-Prot (Human)
Match: KC1A (Casein kinase I isoform alpha OS=Homo sapiens GN=CSNK1A1 PE=1 SV=2) HSP 1 Score: 559.296 bits (1440), Expect = 0.000e+0 Identity = 277/356 (77.81%), Postives = 302/356 (84.83%), Query Frame = 1 Query: 166 MAASSCSK-EFVVGGRYKLIRKIGSGSFGDIYLALNLTNGEEVAVKLESTRARHPQLLYESKVYRLLQGGVGIPHVRWFGQEKDYNVLVLDLLGPSLEDLFNFCSRRFTMKTVLMLADQMIGRIEYVQNKNFIHRDIKPDNFLMGIGRHCNKVYLIDFGLAKKYRENHTKQHIPYREDKNLTGTARYASINAHLGIEQARRDDMESLXLN*KFICNSFRRRDDMESLGYVLMYFNRSSLPWQGLRAATXXXXXXXXXXXXMSTPIEALCKGFPAEFAMYLNYCRGLRFEEMPDYMYLRQLFRILFRTLNHQYDYVFDWSMLKQKAAANTMQFNSTAPNVSMAKGPEERMKRKGTKG 1230 MA+SS SK EF+VGG+YKL+RKIGSGSFGDIYLA+N+TNGEEVAVKLES +ARHPQLLYESK+Y++LQGGVGIPH+RW+GQEKDYNVLV+DLLGPSLEDLFNFCSRRFTMKTVLMLADQMI RIEYV KNFIHRDIKPDNFLMGIGRHCNK++LIDFGLAKKYR+N T+QHIPYREDKNLTGTARYASINAHLGIEQ+RR DDMESLGYVLMYFNR+SLPWQGL+AATKKQKYEKISEKKMSTP+E LCKGFPAEFAMYLNYCRGLRFEE PDYMYLRQLFRILFRTLNHQYDY FDW+MLKQKAA + G + + KG Sbjct: 1 MASSSGSKAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRR--------------------DDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQKAAQQAASSSGQGQQAQTPTGKQTDKTKSNMKG 336 The following BLAST results are available for this feature:
BLAST of TCONS_00014327 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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