XLOC_007947 (gene) - C. hemisphaerica

Overview
NameXLOC_007947
Unique NameXLOC_007947
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000183:217691..225628+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007947 ID=XLOC_007947|Name=XLOC_007947|organism=Clytia hemisphaerica|type=gene|length=7938bp|location=Sequence derived from alignment at sc0000183:217691..225628+ (Clytia hemisphaerica)
TGGTATGTACTATGTATGACGTGCTCCTATTAAAGAGGTATGTTGATAAT TAACTTCGCGTCTTTATGTCGAGGTACAGCCAAAGGTTTGTAAACAGCTT GAGTTGAAATTGTATACGTACATATCGTACATATTTGCAAATCGGACTTG CGATTCAAGATAGTGCTCTATACCATCGGTAGAGCGATATATCAGTCAAT AATAGAGACtagtttattttccgatactcggagtttcgtgccgtttcagg cagtcttcggtcagattttaaaaaattacaaaaataaatcgaatgtcgtt tttgtaattttttaaaatctgactgaagactgcctgaaacggcacgaaac tccgagtatcggaaaataaactaGTCTCTATTATTGACTGATACATATCG TACATAGataattttgttaattgatTGTTCGAGGTTTTAGGATAAGCTTT TGGTAGTTTTTGTTTGGACCGAATTTTACTCGATNGTTTTAGGATAAGCT TTTGGTAGTTTTTGTTTAGACCGAATTTTACTcgatttgttttcatttta gttcagtattcatcatttttaggtccaaagttttgatgaTTCGCCACTAT TAATTGAGTAGAACTGTGTATCTCTGTGTAACTGATCGGTCATTACCATA AGTATTTGTATATGTCAACTTTAACTTCTCATATcaataacaaacaaatt taaagGGAACAGTGACAACATGTATTGAAATAATCCAAGGATTTACTCGG AGTACTCCAGAGTACTCTTTACTTTTGAGGTAGTGAATAAATCCTCATTG TTTTGTAtctattttgtttatttttggacTAAATGCGTCACTGTTGTTTT TTGTAGTGTAGGGTGTGATTTCAGTGGTATAGTGACAACAACAACATTCT GAGCTATACAGATAGGCTTTTGTCCTTTTGAAGcactttcgaaattttca aacgGTCGACGAGGGACGCTTGAGATGAACTACTGTTGAATCTGAaagta aagttcgattaaaagcCGAACAAAAAGCACTGAGACAGTGTGGAGGCTAC AAATGGTTagatttggtttgaattttgcACCTTTTTCCTAgggttttctt cttttttttaacttttttagggCCATCTGAGGAGTTTTCATAATAGCTCC CACATTTAATTTGGAAAGAGCAAGCTAAGCCCAGTATGGTTTGCCTGTTC GATTATTATTGTGAATAGATTTACAAAGCAAATTTCCCATATTTAATCAG ATCAATATTGAAACACTTCAGCTGGAGCCAAGTCCTGACAGATTTTGTCA CCATAATCCTTTTTGAATACCATTTTATTGCGattcattttattcaattt tagaGTGAATATACCTTACATAATGGACATGGGTTAAGGTCCATTTGAGA ACCATGGCACAAGAAAACATCGAAACAAAGAGTAAAGATTTATTGATTGt tacaaaataatatttttgctGATCAGAGTTATAATAGAAAGAGCATGGGT ACtaattggtcaaattttccagtttgttttaaagaattttattaCTTCGC TGTATTGTGGCACAATTGTCATATTTTAGATGGAATGTTTTTTTACTTAA TACCACAAAAATTAATCATTTTTGACTACATAGTGTAGTGTAACATCAAC TTTGAAGTGTTAGCAAAACTGGGGTATCTACTTTTAAAGATCTCTAAATT GATTTGTGCAGATCTGATAAACGTTTTATACTGTTACAAAGCAGATTGAT ATCTTTTTGAATTGAATCACAACAAGCTAGATGGTTTTAAGAGAATGCCG TTGCAATAAAACTGTATCTGAGGTCAGTCGATGTGTAGTTTGATGTTGAA AGTTTCGTTGAGTAAAGGGTATCGCAACAAAGTTTTTTAAGACATGGTTG TGGAACCGAGTAAGAGCAACCTTTTTTATATTAGTTAAACGTATAGGATA GTCATCATCGTTTTCCTAAGCCCTCCATCCAAAGGTCGCAGCCAAACAAC ATTGATTTACGCAGTCTTTCGTTGTTTAAAGTTCTGTTTTCCGTTTCAAA CTATGAAGAACTATTACGCTTTATAGGTTGTATGTATGAGTTAAGGTTTG GCTTCTCCGGTTCCTCAAAGTTTGGTTTTACTGAACGAAAGATAAGTTAG CATTATATAATCCTTGACCTTTGGAAATTACTTGGATGtggattattttc aaaatttacttaACCAAATTGCACTAAATATTGGGTATTTTGTGATGGTA ACTTAACTGTATTCTAATTTGTATACTTATTAGGTAAACGAGGAACATGG GGCCACAAATCGGAATTCATCTTAGCATCCATCGGTCTTGCTGTTGGCCT TGGTAATATATGGAGATTCCCATATCTGTGTCAAAGAAACGGTGGAGGTA TGTAtccttttcaaaatcatttagAAAAAAGAATCCTTCTAGTTCTAAAT TAGCTTAACATTACCACTTTCAGgctgactttttctttgaaacagattAA CTTCGCTTACATTAAGGAATGACCATTCTTTTCTCACAAAAGTTTATAAA GTTTTCATTTCATAGAGTCGATGTTTTATCTTTCTATTCTTGACAGGTGC GTTTCTCATCCCGTACGTTATTTTCATGGTAATCGAAGGTCTACCTATCT TTTTCATCGAGTTTGCTATTGGACAACGTTTCAGAACATCGAGTGTCAAT GCATGGGCTAAAGTCTCTCCAGCTCTGAAAGGAATCGGATGGTCATGTGT GTGCGTCTCCACATTCGTATGCATATACTACATTGTTGTGTTGAGTTGGT GTATTTATTATTTCCTAATGTCCTTCACCTCTGACCTTCCTTGGGATATC GAGCAAACATGTCTCAACAACCCACAGTATCAAACCATACTGAATAACGT GGCCAAATACAAAGGCAATGCAACTGAGTTACCGAAATGGATCGATGCCA TGGATTCATTCAGTGATTGCTGTGTTCGTGATCCAGCACAGTGGTATTTC TACCAACGTGTTTTACGCGTTTCGAGTGGAATCGAAGATACAGGTGTAGG CTTGAATGTCAATTTGGTCGGATGTCTTATTTTAGCCTGGATTATCACTT ATTTGTGTGTCGTCAAAGGAATCAAGTCTAGTGGAAAGGTAGGTGGAAAA TCTATATCTTTAACTATCAGAGCTTGCCTTTTGGAATTTAAGAACGTGTC TGCATGACTGGTCGGTAGCTCTTTAGGTTTATAAAGGTCTAGTCTAAGAT AAACGAAATTCGATGATTATTGTCTGTAAAACACAGTACCATTATCTGCT AAATTTCTTTCTGCTTTTCTGTGTAACTTTTCAGGTAGTTTATTTCACGG CTGTTTTCCCGTATatcgttttgttgattttcttctttcgtGGCGTGACC TTGGACAACGCcaaaaatggtatcaaaactTTCTTCAATCCTGACGTAAG TCTGTCTATACTTGTCTCCTGAGGAGATGATTCCAATATTAGCTAATTAG TTAATTGAATTTTATTACAATTTACGTCGAAGATGCTGTCATTTGTAACT TTTAGACATTATTTCCCTTctaaatttaaagatttttatcaCAAGTTTTG ACTGgcctttctaaaaaaaaaacaatattgtaAGCCCCCTGTTGAGCAGG TTCTAAAGAAGATAAAGTTCGAACTGGGTCTGATTTACAGTGATGCACTT GAAGATCTACCAAAGTAAGCCGTGTTacacgggggggggggctattatta gaaacaaagaaaatgtcattCCTGAAGGGCATGatcctaaaaaaagaaaa aggttggGCCTTCTTTGCAGGAACTACTGTACCGCATCTATGTCATCAGA TCATCTATATCACTTTTTTAGTGGTCAAAATTGGAAGACCCTCAAATTTG GATGGATGCAGCTACCCAAATCTTTTTTACACTTAGCTTAGGCTTCGGTG CTTTGGTGGCCTTTGCTTCATATATGCCCATCAAGAATAATTGTATCCGA GATGCTTACACAGTTGTGTTCATCAACTGTGGAACATCTGTATTTGCCGG AGTTGTTGTCTTCTCCATACTAGGCTATCGTGAATTGAAAACAGGGCTAC CAGCAGATAAGGTAAATTTGTTGTTCAAGATCCTTAAAGATTTGCAAAAC TATTCTTAGATTTCTATCTTAGAGAACCATGTTCTTTGAGTTTGCTATTT TCACTGTTAGATTTTTTCCTaagaacacccccttctcacagacccggtgg gattctTTCAGCCAGTGGGAATGAAAATGACGGACAAAAACTCGACGGGG ATTGATtatcccatattttttatgactggagatctcaaatcttttatttt caagtcagaaaattctgTGGGGAtgggtttatttgattattttcagtgtg gACAAAAATAGGAGGAtagttttccactggggacgatattttggccaatt tttccagtgggaagggatcccagtgggtctgtgagaagggggtgtctaaG ATTATCTATGTGTCTATTTTAGGGAAGTCGATGATTTAAATTCTCAATTC ACCATTTAAGGTTTCATCTGGTCCTGGTCTAGCTTTCATGGCATTTTCAG ATGCAATTCTTTTGATGAAAGGATCACCATTCTGGGCTGTCATGTTTTTC CTGATGCTCATTCTACTTGGTATTGATTCAGAATTTGGTGTTTTGGAAGC AACAATCACTCCCTTTTATGATTCAGGAGTTGTCAAAATGCGCAAAGAAG TCTTCACAGGTATATGTTCAATGAAACACGTTTTTTCACCTAAATGAACA TAGTGCTCCGATAACAACTTGGTCTGTTTAAACGCAaagtctttaaaatt ttgaaccaATATAAAGCTGCTATTGATCCTTATTCTCCATTTGGCCTGTA GGAGATTATCTTGCTTAtaccgttcgttcgtccgtccgttcgttaccaac ttttctcgagattgaatcataggaatcttttaatttaaggtacaaaggtg caaaatggtgttggccaaaatgtgacggagcccgattttcgaaaaataaa ttttttgggcaaatttgggaaaaattgaATCGTTtatgttttctgatttt ttgcatgaaagtaggctaccatgataaaaaaaattgttgggtaaatttca gctaaaaaacggctaaaaaaggtatttttggactttgtgaaatattggat cattctttttttctgattttttgcatgaaagtaggtaaaagatggctcaa gcagatttttgtaaaaaagaatttttcagcttaaaaaacgcatctttatc tataagaatcactattaataagcatatatcaatgttcttagccaaattac tcaattttttgatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgatga gatagatgttttttttttgctcacgaagtcttgaatatgaaagaatattt caagagcatgaaattttggtttctaaacgtttttttataagaaacaaacg actaattttaatagatcgtcactatttgtgttctgaatgatttttTAACG GTCACGCTcaagtagatatcaattatatatgtgttaaatgcataaccagg taggtccataaaagtatcacttgtttttcaaaaaaggaccaccacttagt accctGGTACAAAGTGGCATATCACCctgggggggcactgggtttgcgga ctgacggtatgtgcgggccaaaaattggcttttaaaattgcacccttaca gtgcagcaaaaatcagtgaaaatcatacccttagagtgcattttccccca aatttttatccctttcgtgcaaaatatgatcaaaatttttttggtcaaaa tatctagatttttcaagaattttctgaaatttctacccttacagtgcatc tctagttttccgacccttacagtgcattttaaacatattggaaaaggtac ccttagaaCCCGCActtacccgtcggtccttttgcacAGCTGCCTCCCTC TCGGGCATATCACCTACCAATTTGGACCACCCACCCAGCAGTGGTCCCCA TAACTTACTACCCCCCTCCTGTTGAAACCAAAAGATTTGGCTCGCCGTTT TTTGATAACCAGAAATTCGTAGTAACGAAAGATGGAGTAAAAATCTGCAT TTCCATCAAACTTTTGACGAACTTTCTTTCTCTTATAGCAATCTTTGCTT TCGTCATGTTTCTGATTGGTTTATGTTTGGTAGCTGGTAACGGTTTCTAC ATTTTCCAAATCTTCGACGATTTCTCCGTTTCTTTACCATTGTTGTTTAT TGCATTCTTCCAATGCATTGGTGTCACGTGGATTTATGGATCTGATAAGT AAGTACCAGACCTCACATAACTCATTTTGTGAGTAATATAAAGGCCTGAA GTAACAATGACTGTTTTTTAAGTCGACGCTTTTTATCGCCGTAAAAGTTC TCTGGAGGACCATCATCGAAGTATAAAGCGACCTCTGATGATTTTCACCA AAAGGCATTTCAACAAAGTCCTATCGTTCATCTATAAGGTCGCGCCATTG TGAAATAGTTTGTTAAAACTGAAAGGTTTTCTTACCCTCCAACTCCTACC TTTTTTTCTAGTTTTGCAAATGATATAGAGTACATGACTGGATCAAGACC GAACATCTTTTGGATGTTATGTTGGAAATACATTTCTCCTGTTGCACTTC TTGTTGTCTTCATCACCAACATCAATACTTTGAGTAAAGACACAGCCAAA TATGCTGTTTATACTGGCTGCCCTAGTGTAAGTATTCGGAATTTATGTGC AATATTGGTTGAAAGTTTACATgagatttattatttatttttgcaaTGAA GTAGACTGGCTGTCTTGAAGACTTGATCAAACACATTATATAAAGAGGTA TatggtcatttttgaagtctGTTATGACTTCAAAATGACCACAGACCCGA TAGCATCCCCTACCTATTGGAAAATAATCCAAGAATTTCCACGTTTGTAT TTTTAGCTCCTTTGTTTCATTTCCGTTACCTATCAAATTCCCACTCAGTT ATTGAGTCAGACAGGTTTAAagaaaattgttaattttatgttttttgata tttctCTTGTAGGACCCCTTGCATTATCAGCACGCCGGTACATCAGAATG GTTAACCAAAGTTGAGTATCCACCCTGGGGCCAATTCTTAATCGTCCTTG TTGTGGGCGTCAGTTTTCTGCCCATCCTTATCTATCTGTTCTTAGATTTA TATCGCCGCCCAGGTGCTTGGAAGGCGGGTATTAAGAAACGATTTTTCAC CAGTTGGCATGAATATCTACCTGATCCCGCCATGTTCGATGCATCTCGAA GAAAGACAACTTATCAAATGGAAGAAATGGTACTTGCATCTTTGGAGAAC GATAAAATGAAATAGACAAATTCACAAATCAGAAGTGTAAAAAATTTATG CTGGTTTACAAAGTATTTGCTGTATAATAGAGAATGCGAATGGGAGTCAC TTCATGGCTTCCGCCACCAGCAGGGTGGTCATGGACTCGCTATTTTGCTA TTTTGCGCTATATTGAACTTAAGTCGCTTTTTTCCagggatttttttaaa ttgacttGGAATGGCTCTAAAAAGCACTTTCAGCATCTTAGATTTCAAAA TCTTCTCCGCTGCACAACGTCTTGTAGAAAAATCAGAATTTAGATTAGAC GTGACGCAAATTTAAAGGGAATCAGAACGGACTATAGGTTTTCAAAATAA TCGATTTGCCCTTTTGCCAATTTTTATTTGGTCCTTATGTTATCTATAAA AACCCGTATAAataaatcatattttttgtcTATACTACAATTATTATATG GAGATTTTATCTTAGTTTTCTTTAGGTgtactttttaaagaaaatttaaa ggaaagaaCCAAGAAAATACTCGGTAGCAGTAATGAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00014195TCONS_00014195Clytia hemisphaericatranscript
TCONS_00014196TCONS_00014196Clytia hemisphaericatranscript
TCONS_00014197TCONS_00014197Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00014196-proteinTCONS_00014196-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000183supercontigsc0000183:217691..225628 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.57 0.57 0.29 0.53 1.09 1.11 12.37 13.21 6.76 9.15 17.03 5.27 26.65 33.99 9.72 7.17 14.15 21.27 16.31 11.36 56.63 54.19 7.65 11.84 15.25 10.16 2.65 1.97 0.27 0.28