TCONS_00014195 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014195
Unique NameTCONS_00014195
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2395

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014195 ID=TCONS_00014195|Name=TCONS_00014195|organism=Clytia hemisphaerica|type=transcript|length=2395bp
TGGTATGTACTATGTATGACGTGCTCCTATTAAAGAGGTAAACGAGGAAC
ATGGGGCCACAAATCGGAATTCATCTTAGCATCCATCGGTCTTGCTGTTG
GCCTTGGTAATATATGGAGATTCCCATATCTGTGTCAAAGAAACGGTGGA
GGTGCGTTTCTCATCCCGTACGTTATTTTCATGGTAATCGAAGGTCTACC
TATCTTTTTCATCGAGTTTGCTATTGGACAACGTTTCAGAACATCGAGTG
TCAATGCATGGGCTAAAGTCTCTCCAGCTCTGAAAGGAATCGGATGGTCA
TGTGTGTGCGTCTCCACATTCGTATGCATATACTACATTGTTGTGTTGAG
TTGGTGTATTTATTATTTCCTAATGTCCTTCACCTCTGACCTTCCTTGGG
ATATCGAGCAAACATGTCTCAACAACCCACAGTATCAAACCATACTGAAT
AACGTGGCCAAATACAAAGGCAATGCAACTGAGTTACCGAAATGGATCGA
TGCCATGGATTCATTCAGTGATTGCTGTGTTCGTGATCCAGCACAGTGGT
ATTTCTACCAACGTGTTTTACGCGTTTCGAGTGGAATCGAAGATACAGGT
GTAGGCTTGAATGTCAATTTGGTCGGATGTCTTATTTTAGCCTGGATTAT
CACTTATTTGTGTGTCGTCAAAGGAATCAAGTCTAGTGGAAAGGTAGTTT
ATTTCACGGCTGTTTTCCCGTATatcgttttgttgattttcttctttcgt
GGCGTGACCTTGGACAACGCcaaaaatggtatcaaaactTTCTTCAATCC
TGACTGGTCAAAATTGGAAGACCCTCAAATTTGGATGGATGCAGCTACCC
AAATCTTTTTTACACTTAGCTTAGGCTTCGGTGCTTTGGTGGCCTTTGCT
TCATATATGCCCATCAAGAATAATTGTATCCGAGATGCTTACACAGTTGT
GTTCATCAACTGTGGAACATCTGTATTTGCCGGAGTTGTTGTCTTCTCCA
TACTAGGCTATCGTGAATTGAAAACAGGGCTACCAGCAGATAAGGTTTCA
TCTGGTCCTGGTCTAGCTTTCATGGCATTTTCAGATGCAATTCTTTTGAT
GAAAGGATCACCATTCTGGGCTGTCATGTTTTTCCTGATGCTCATTCTAC
TTGGTATTGATTCAGAATTTGGTGTTTTGGAAGCAACAATCACTCCCTTT
TATGATTCAGGAGTTGTCAAAATGCGCAAAGAAGTCTTCACAGCAATCTT
TGCTTTCGTCATGTTTCTGATTGGTTTATGTTTGGTAGCTGGTAACGGTT
TCTACATTTTCCAAATCTTCGACGATTTCTCCGTTTCTTTACCATTGTTG
TTTATTGCATTCTTCCAATGCATTGGTGTCACGTGGATTTATGGATCTGA
TAATTTTGCAAATGATATAGAGTACATGACTGGATCAAGACCGAACATCT
TTTGGATGTTATGTTGGAAATACATTTCTCCTGTTGCACTTCTTGTTGTC
TTCATCACCAACATCAATACTTTGAGTAAAGACACAGCCAAATATGCTGT
TTATACTGGCTGCCCTAGTGACCCCTTGCATTATCAGCACGCCGGTACAT
CAGAATGGTTAACCAAAGTTGAGTATCCACCCTGGGGCCAATTCTTAATC
GTCCTTGTTGTGGGCGTCAGTTTTCTGCCCATCCTTATCTATCTGTTCTT
AGATTTATATCGCCGCCCAGGTGCTTGGAAGGCGGGTATTAAGAAACGAT
TTTTCACCAGTTGGCATGAATATCTACCTGATCCCGCCATGTTCGATGCA
TCTCGAAGAAAGACAACTTATCAAATGGAAGAAATGGTACTTGCATCTTT
GGAGAACGATAAAATGAAATAGACAAATTCACAAATCAGAAGTGTAAAAA
ATTTATGCTGGTTTACAAAGTATTTGCTGTATAATAGAGAATGCGAATGG
GAGTCACTTCATGGCTTCCGCCACCAGCAGGGTGGTCATGGACTCGCTAT
TTTGCTATTTTGCGCTATATTGAACTTAAGTCGCTTTTTTCCagggattt
ttttaaattgacttGGAATGGCTCTAAAAAGCACTTTCAGCATCTTAGAT
TTCAAAATCTTCTCCGCTGCACAACGTCTTGTAGAAAAATCAGAATTTAG
ATTAGACGTGACGCAAATTTAAAGGGAATCAGAACGGACTATAGGTTTTC
AAAATAATCGATTTGCCCTTTTGCCAATTTTTATTTGGTCCTTATGTTAT
CTATAAAAACCCGTATAAataaatcatattttttgtcTATACTACAATTA
TTATATGGAGATTTTATCTTAGTTTTCTTTAGGTgtactttttaaagaaa
atttaaaggaaagaaCCAAGAAAATACTCGGTAGCAGTAATGAAG
Run BLAST on NCBI

transcript from alignment at sc0000183:217691..225628+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014195 ID=TCONS_00014195|Name=TCONS_00014195|organism=Clytia hemisphaerica|type=transcript|length=7938bp|location=Sequence derived from alignment at sc0000183:217691..225628+ (Clytia hemisphaerica)
TGGTATGTACTATGTATGACGTGCTCCTATTAAAGAGGTATGTTGATAAT
TAACTTCGCGTCTTTATGTCGAGGTACAGCCAAAGGTTTGTAAACAGCTT
GAGTTGAAATTGTATACGTACATATCGTACATATTTGCAAATCGGACTTG
CGATTCAAGATAGTGCTCTATACCATCGGTAGAGCGATATATCAGTCAAT
AATAGAGACtagtttattttccgatactcggagtttcgtgccgtttcagg
cagtcttcggtcagattttaaaaaattacaaaaataaatcgaatgtcgtt
tttgtaattttttaaaatctgactgaagactgcctgaaacggcacgaaac
tccgagtatcggaaaataaactaGTCTCTATTATTGACTGATACATATCG
TACATAGataattttgttaattgatTGTTCGAGGTTTTAGGATAAGCTTT
TGGTAGTTTTTGTTTGGACCGAATTTTACTCGATNGTTTTAGGATAAGCT
TTTGGTAGTTTTTGTTTAGACCGAATTTTACTcgatttgttttcatttta
gttcagtattcatcatttttaggtccaaagttttgatgaTTCGCCACTAT
TAATTGAGTAGAACTGTGTATCTCTGTGTAACTGATCGGTCATTACCATA
AGTATTTGTATATGTCAACTTTAACTTCTCATATcaataacaaacaaatt
taaagGGAACAGTGACAACATGTATTGAAATAATCCAAGGATTTACTCGG
AGTACTCCAGAGTACTCTTTACTTTTGAGGTAGTGAATAAATCCTCATTG
TTTTGTAtctattttgtttatttttggacTAAATGCGTCACTGTTGTTTT
TTGTAGTGTAGGGTGTGATTTCAGTGGTATAGTGACAACAACAACATTCT
GAGCTATACAGATAGGCTTTTGTCCTTTTGAAGcactttcgaaattttca
aacgGTCGACGAGGGACGCTTGAGATGAACTACTGTTGAATCTGAaagta
aagttcgattaaaagcCGAACAAAAAGCACTGAGACAGTGTGGAGGCTAC
AAATGGTTagatttggtttgaattttgcACCTTTTTCCTAgggttttctt
cttttttttaacttttttagggCCATCTGAGGAGTTTTCATAATAGCTCC
CACATTTAATTTGGAAAGAGCAAGCTAAGCCCAGTATGGTTTGCCTGTTC
GATTATTATTGTGAATAGATTTACAAAGCAAATTTCCCATATTTAATCAG
ATCAATATTGAAACACTTCAGCTGGAGCCAAGTCCTGACAGATTTTGTCA
CCATAATCCTTTTTGAATACCATTTTATTGCGattcattttattcaattt
tagaGTGAATATACCTTACATAATGGACATGGGTTAAGGTCCATTTGAGA
ACCATGGCACAAGAAAACATCGAAACAAAGAGTAAAGATTTATTGATTGt
tacaaaataatatttttgctGATCAGAGTTATAATAGAAAGAGCATGGGT
ACtaattggtcaaattttccagtttgttttaaagaattttattaCTTCGC
TGTATTGTGGCACAATTGTCATATTTTAGATGGAATGTTTTTTTACTTAA
TACCACAAAAATTAATCATTTTTGACTACATAGTGTAGTGTAACATCAAC
TTTGAAGTGTTAGCAAAACTGGGGTATCTACTTTTAAAGATCTCTAAATT
GATTTGTGCAGATCTGATAAACGTTTTATACTGTTACAAAGCAGATTGAT
ATCTTTTTGAATTGAATCACAACAAGCTAGATGGTTTTAAGAGAATGCCG
TTGCAATAAAACTGTATCTGAGGTCAGTCGATGTGTAGTTTGATGTTGAA
AGTTTCGTTGAGTAAAGGGTATCGCAACAAAGTTTTTTAAGACATGGTTG
TGGAACCGAGTAAGAGCAACCTTTTTTATATTAGTTAAACGTATAGGATA
GTCATCATCGTTTTCCTAAGCCCTCCATCCAAAGGTCGCAGCCAAACAAC
ATTGATTTACGCAGTCTTTCGTTGTTTAAAGTTCTGTTTTCCGTTTCAAA
CTATGAAGAACTATTACGCTTTATAGGTTGTATGTATGAGTTAAGGTTTG
GCTTCTCCGGTTCCTCAAAGTTTGGTTTTACTGAACGAAAGATAAGTTAG
CATTATATAATCCTTGACCTTTGGAAATTACTTGGATGtggattattttc
aaaatttacttaACCAAATTGCACTAAATATTGGGTATTTTGTGATGGTA
ACTTAACTGTATTCTAATTTGTATACTTATTAGGTAAACGAGGAACATGG
GGCCACAAATCGGAATTCATCTTAGCATCCATCGGTCTTGCTGTTGGCCT
TGGTAATATATGGAGATTCCCATATCTGTGTCAAAGAAACGGTGGAGGTA
TGTAtccttttcaaaatcatttagAAAAAAGAATCCTTCTAGTTCTAAAT
TAGCTTAACATTACCACTTTCAGgctgactttttctttgaaacagattAA
CTTCGCTTACATTAAGGAATGACCATTCTTTTCTCACAAAAGTTTATAAA
GTTTTCATTTCATAGAGTCGATGTTTTATCTTTCTATTCTTGACAGGTGC
GTTTCTCATCCCGTACGTTATTTTCATGGTAATCGAAGGTCTACCTATCT
TTTTCATCGAGTTTGCTATTGGACAACGTTTCAGAACATCGAGTGTCAAT
GCATGGGCTAAAGTCTCTCCAGCTCTGAAAGGAATCGGATGGTCATGTGT
GTGCGTCTCCACATTCGTATGCATATACTACATTGTTGTGTTGAGTTGGT
GTATTTATTATTTCCTAATGTCCTTCACCTCTGACCTTCCTTGGGATATC
GAGCAAACATGTCTCAACAACCCACAGTATCAAACCATACTGAATAACGT
GGCCAAATACAAAGGCAATGCAACTGAGTTACCGAAATGGATCGATGCCA
TGGATTCATTCAGTGATTGCTGTGTTCGTGATCCAGCACAGTGGTATTTC
TACCAACGTGTTTTACGCGTTTCGAGTGGAATCGAAGATACAGGTGTAGG
CTTGAATGTCAATTTGGTCGGATGTCTTATTTTAGCCTGGATTATCACTT
ATTTGTGTGTCGTCAAAGGAATCAAGTCTAGTGGAAAGGTAGGTGGAAAA
TCTATATCTTTAACTATCAGAGCTTGCCTTTTGGAATTTAAGAACGTGTC
TGCATGACTGGTCGGTAGCTCTTTAGGTTTATAAAGGTCTAGTCTAAGAT
AAACGAAATTCGATGATTATTGTCTGTAAAACACAGTACCATTATCTGCT
AAATTTCTTTCTGCTTTTCTGTGTAACTTTTCAGGTAGTTTATTTCACGG
CTGTTTTCCCGTATatcgttttgttgattttcttctttcgtGGCGTGACC
TTGGACAACGCcaaaaatggtatcaaaactTTCTTCAATCCTGACGTAAG
TCTGTCTATACTTGTCTCCTGAGGAGATGATTCCAATATTAGCTAATTAG
TTAATTGAATTTTATTACAATTTACGTCGAAGATGCTGTCATTTGTAACT
TTTAGACATTATTTCCCTTctaaatttaaagatttttatcaCAAGTTTTG
ACTGgcctttctaaaaaaaaaacaatattgtaAGCCCCCTGTTGAGCAGG
TTCTAAAGAAGATAAAGTTCGAACTGGGTCTGATTTACAGTGATGCACTT
GAAGATCTACCAAAGTAAGCCGTGTTacacgggggggggggctattatta
gaaacaaagaaaatgtcattCCTGAAGGGCATGatcctaaaaaaagaaaa
aggttggGCCTTCTTTGCAGGAACTACTGTACCGCATCTATGTCATCAGA
TCATCTATATCACTTTTTTAGTGGTCAAAATTGGAAGACCCTCAAATTTG
GATGGATGCAGCTACCCAAATCTTTTTTACACTTAGCTTAGGCTTCGGTG
CTTTGGTGGCCTTTGCTTCATATATGCCCATCAAGAATAATTGTATCCGA
GATGCTTACACAGTTGTGTTCATCAACTGTGGAACATCTGTATTTGCCGG
AGTTGTTGTCTTCTCCATACTAGGCTATCGTGAATTGAAAACAGGGCTAC
CAGCAGATAAGGTAAATTTGTTGTTCAAGATCCTTAAAGATTTGCAAAAC
TATTCTTAGATTTCTATCTTAGAGAACCATGTTCTTTGAGTTTGCTATTT
TCACTGTTAGATTTTTTCCTaagaacacccccttctcacagacccggtgg
gattctTTCAGCCAGTGGGAATGAAAATGACGGACAAAAACTCGACGGGG
ATTGATtatcccatattttttatgactggagatctcaaatcttttatttt
caagtcagaaaattctgTGGGGAtgggtttatttgattattttcagtgtg
gACAAAAATAGGAGGAtagttttccactggggacgatattttggccaatt
tttccagtgggaagggatcccagtgggtctgtgagaagggggtgtctaaG
ATTATCTATGTGTCTATTTTAGGGAAGTCGATGATTTAAATTCTCAATTC
ACCATTTAAGGTTTCATCTGGTCCTGGTCTAGCTTTCATGGCATTTTCAG
ATGCAATTCTTTTGATGAAAGGATCACCATTCTGGGCTGTCATGTTTTTC
CTGATGCTCATTCTACTTGGTATTGATTCAGAATTTGGTGTTTTGGAAGC
AACAATCACTCCCTTTTATGATTCAGGAGTTGTCAAAATGCGCAAAGAAG
TCTTCACAGGTATATGTTCAATGAAACACGTTTTTTCACCTAAATGAACA
TAGTGCTCCGATAACAACTTGGTCTGTTTAAACGCAaagtctttaaaatt
ttgaaccaATATAAAGCTGCTATTGATCCTTATTCTCCATTTGGCCTGTA
GGAGATTATCTTGCTTAtaccgttcgttcgtccgtccgttcgttaccaac
ttttctcgagattgaatcataggaatcttttaatttaaggtacaaaggtg
caaaatggtgttggccaaaatgtgacggagcccgattttcgaaaaataaa
ttttttgggcaaatttgggaaaaattgaATCGTTtatgttttctgatttt
ttgcatgaaagtaggctaccatgataaaaaaaattgttgggtaaatttca
gctaaaaaacggctaaaaaaggtatttttggactttgtgaaatattggat
cattctttttttctgattttttgcatgaaagtaggtaaaagatggctcaa
gcagatttttgtaaaaaagaatttttcagcttaaaaaacgcatctttatc
tataagaatcactattaataagcatatatcaatgttcttagccaaattac
tcaattttttgatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgatga
gatagatgttttttttttgctcacgaagtcttgaatatgaaagaatattt
caagagcatgaaattttggtttctaaacgtttttttataagaaacaaacg
actaattttaatagatcgtcactatttgtgttctgaatgatttttTAACG
GTCACGCTcaagtagatatcaattatatatgtgttaaatgcataaccagg
taggtccataaaagtatcacttgtttttcaaaaaaggaccaccacttagt
accctGGTACAAAGTGGCATATCACCctgggggggcactgggtttgcgga
ctgacggtatgtgcgggccaaaaattggcttttaaaattgcacccttaca
gtgcagcaaaaatcagtgaaaatcatacccttagagtgcattttccccca
aatttttatccctttcgtgcaaaatatgatcaaaatttttttggtcaaaa
tatctagatttttcaagaattttctgaaatttctacccttacagtgcatc
tctagttttccgacccttacagtgcattttaaacatattggaaaaggtac
ccttagaaCCCGCActtacccgtcggtccttttgcacAGCTGCCTCCCTC
TCGGGCATATCACCTACCAATTTGGACCACCCACCCAGCAGTGGTCCCCA
TAACTTACTACCCCCCTCCTGTTGAAACCAAAAGATTTGGCTCGCCGTTT
TTTGATAACCAGAAATTCGTAGTAACGAAAGATGGAGTAAAAATCTGCAT
TTCCATCAAACTTTTGACGAACTTTCTTTCTCTTATAGCAATCTTTGCTT
TCGTCATGTTTCTGATTGGTTTATGTTTGGTAGCTGGTAACGGTTTCTAC
ATTTTCCAAATCTTCGACGATTTCTCCGTTTCTTTACCATTGTTGTTTAT
TGCATTCTTCCAATGCATTGGTGTCACGTGGATTTATGGATCTGATAAGT
AAGTACCAGACCTCACATAACTCATTTTGTGAGTAATATAAAGGCCTGAA
GTAACAATGACTGTTTTTTAAGTCGACGCTTTTTATCGCCGTAAAAGTTC
TCTGGAGGACCATCATCGAAGTATAAAGCGACCTCTGATGATTTTCACCA
AAAGGCATTTCAACAAAGTCCTATCGTTCATCTATAAGGTCGCGCCATTG
TGAAATAGTTTGTTAAAACTGAAAGGTTTTCTTACCCTCCAACTCCTACC
TTTTTTTCTAGTTTTGCAAATGATATAGAGTACATGACTGGATCAAGACC
GAACATCTTTTGGATGTTATGTTGGAAATACATTTCTCCTGTTGCACTTC
TTGTTGTCTTCATCACCAACATCAATACTTTGAGTAAAGACACAGCCAAA
TATGCTGTTTATACTGGCTGCCCTAGTGTAAGTATTCGGAATTTATGTGC
AATATTGGTTGAAAGTTTACATgagatttattatttatttttgcaaTGAA
GTAGACTGGCTGTCTTGAAGACTTGATCAAACACATTATATAAAGAGGTA
TatggtcatttttgaagtctGTTATGACTTCAAAATGACCACAGACCCGA
TAGCATCCCCTACCTATTGGAAAATAATCCAAGAATTTCCACGTTTGTAT
TTTTAGCTCCTTTGTTTCATTTCCGTTACCTATCAAATTCCCACTCAGTT
ATTGAGTCAGACAGGTTTAAagaaaattgttaattttatgttttttgata
tttctCTTGTAGGACCCCTTGCATTATCAGCACGCCGGTACATCAGAATG
GTTAACCAAAGTTGAGTATCCACCCTGGGGCCAATTCTTAATCGTCCTTG
TTGTGGGCGTCAGTTTTCTGCCCATCCTTATCTATCTGTTCTTAGATTTA
TATCGCCGCCCAGGTGCTTGGAAGGCGGGTATTAAGAAACGATTTTTCAC
CAGTTGGCATGAATATCTACCTGATCCCGCCATGTTCGATGCATCTCGAA
GAAAGACAACTTATCAAATGGAAGAAATGGTACTTGCATCTTTGGAGAAC
GATAAAATGAAATAGACAAATTCACAAATCAGAAGTGTAAAAAATTTATG
CTGGTTTACAAAGTATTTGCTGTATAATAGAGAATGCGAATGGGAGTCAC
TTCATGGCTTCCGCCACCAGCAGGGTGGTCATGGACTCGCTATTTTGCTA
TTTTGCGCTATATTGAACTTAAGTCGCTTTTTTCCagggatttttttaaa
ttgacttGGAATGGCTCTAAAAAGCACTTTCAGCATCTTAGATTTCAAAA
TCTTCTCCGCTGCACAACGTCTTGTAGAAAAATCAGAATTTAGATTAGAC
GTGACGCAAATTTAAAGGGAATCAGAACGGACTATAGGTTTTCAAAATAA
TCGATTTGCCCTTTTGCCAATTTTTATTTGGTCCTTATGTTATCTATAAA
AACCCGTATAAataaatcatattttttgtcTATACTACAATTATTATATG
GAGATTTTATCTTAGTTTTCTTTAGGTgtactttttaaagaaaatttaaa
ggaaagaaCCAAGAAAATACTCGGTAGCAGTAATGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007947XLOC_007947Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014195-exon-sc0000183-1491911889:217691..217727TCONS_00014195-exon-sc0000183-1491911889:217691..217727Clytia hemisphaericaexon
TCONS_00014195-exon-sc0000183-1510915933:217691..217727TCONS_00014195-exon-sc0000183-1510915933:217691..217727Clytia hemisphaericaexon
TCONS_00014195-exon-sc0000183-1575043694:217691..217727TCONS_00014195-exon-sc0000183-1575043694:217691..217727Clytia hemisphaericaexon
TCONS_00014195-exon-sc0000183-1491911889:219974..220087TCONS_00014195-exon-sc0000183-1491911889:219974..220087Clytia hemisphaericaexon
TCONS_00014195-exon-sc0000183-1510915933:219974..220087TCONS_00014195-exon-sc0000183-1510915933:219974..220087Clytia hemisphaericaexon
TCONS_00014195-exon-sc0000183-1575043694:219974..220087TCONS_00014195-exon-sc0000183-1575043694:219974..220087Clytia hemisphaericaexon
TCONS_00014195-exon-sc0000183-1491911889:220287..220828TCONS_00014195-exon-sc0000183-1491911889:220287..220828Clytia hemisphaericaexon
TCONS_00014195-exon-sc0000183-1510915933:220287..220828TCONS_00014195-exon-sc0000183-1510915933:220287..220828Clytia hemisphaericaexon
TCONS_00014195-exon-sc0000183-1575043694:220287..220828TCONS_00014195-exon-sc0000183-1575043694:220287..220828Clytia hemisphaericaexon
TCONS_00014195-exon-sc0000183-1491911889:221025..221135TCONS_00014195-exon-sc0000183-1491911889:221025..221135Clytia hemisphaericaexon
TCONS_00014195-exon-sc0000183-1510915933:221025..221135TCONS_00014195-exon-sc0000183-1510915933:221025..221135Clytia hemisphaericaexon
TCONS_00014195-exon-sc0000183-1575043694:221025..221135TCONS_00014195-exon-sc0000183-1575043694:221025..221135Clytia hemisphaericaexon
TCONS_00014195-exon-sc0000183-1491911889:221562..221801TCONS_00014195-exon-sc0000183-1491911889:221562..221801Clytia hemisphaericaexon
TCONS_00014195-exon-sc0000183-1510915933:221562..221801TCONS_00014195-exon-sc0000183-1510915933:221562..221801Clytia hemisphaericaexon
TCONS_00014195-exon-sc0000183-1575043694:221562..221801TCONS_00014195-exon-sc0000183-1575043694:221562..221801Clytia hemisphaericaexon
TCONS_00014195-exon-sc0000183-1491911889:222251..222449TCONS_00014195-exon-sc0000183-1491911889:222251..222449Clytia hemisphaericaexon
TCONS_00014195-exon-sc0000183-1510915933:222251..222449TCONS_00014195-exon-sc0000183-1510915933:222251..222449Clytia hemisphaericaexon
TCONS_00014195-exon-sc0000183-1575043694:222251..222449TCONS_00014195-exon-sc0000183-1575043694:222251..222449Clytia hemisphaericaexon
TCONS_00014195-exon-sc0000183-1491911889:223879..224038TCONS_00014195-exon-sc0000183-1491911889:223879..224038Clytia hemisphaericaexon
TCONS_00014195-exon-sc0000183-1510915933:223879..224038TCONS_00014195-exon-sc0000183-1510915933:223879..224038Clytia hemisphaericaexon
TCONS_00014195-exon-sc0000183-1575043694:223879..224038TCONS_00014195-exon-sc0000183-1575043694:223879..224038Clytia hemisphaericaexon
TCONS_00014195-exon-sc0000183-1491911889:224302..224467TCONS_00014195-exon-sc0000183-1491911889:224302..224467Clytia hemisphaericaexon
TCONS_00014195-exon-sc0000183-1510915933:224302..224467TCONS_00014195-exon-sc0000183-1510915933:224302..224467Clytia hemisphaericaexon
TCONS_00014195-exon-sc0000183-1575043694:224302..224467TCONS_00014195-exon-sc0000183-1575043694:224302..224467Clytia hemisphaericaexon
TCONS_00014195-exon-sc0000183-1491911889:224803..225628TCONS_00014195-exon-sc0000183-1491911889:224803..225628Clytia hemisphaericaexon
TCONS_00014195-exon-sc0000183-1510915933:224803..225628TCONS_00014195-exon-sc0000183-1510915933:224803..225628Clytia hemisphaericaexon
TCONS_00014195-exon-sc0000183-1575043694:224803..225628TCONS_00014195-exon-sc0000183-1575043694:224803..225628Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000183supercontigsc0000183:217691..225628 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.197365	0.117586	0.19483	0	0.101975	0.437744	1.03153	2.61592	2.79025	4.83275	2.47929	2.34566	13.7991	14.2153	4.2963	3.99688	10.1576	16.0911	6.82384	4.06487	38.5401	39.0344	4.84655	8.78606	8.37236	6.30713	0.390393	1.54218	0.270203	0.275294
Blast
[Close]
BLAST of TCONS_00014195 vs. Swiss-Prot (Human)
Match: S6A12 (Sodium- and chloride-dependent betaine transporter OS=Homo sapiens GN=SLC6A12 PE=1 SV=2)

HSP 1 Score: 375.555 bits (963), Expect = 7.505e-119
Identity = 233/587 (39.69%), Postives = 341/587 (58.09%), Query Frame = 1 
Query:   43 RGTWGHKSEFILASIGLAVGLGNIWRFPYLCQRNGGGAFLIPYVIFMVIEGLPIFFIEFAIGQRFRTSSVNAWAKVSPALKGIGWSCVCVSTFVCIYYIVVLSWCIYYFLMSFTSDLPWDIEQTCLNNPQYQTILNNVAKYKGNATELPKWIDAMDSFSDCCVRDPAQWYFYQRVLRVSSGIEDTGVGLNVNLVGCLILAWIITYLCXXXXXXXXXXXXYFTAVFPYIVLLIFFFRGVTLDNAKNGIKTFFNPDWSKLEDPQIWMDAATQIFFTLSLGFGALVAFASYMPIKNNCIRDAYTVVFINCGTSVFAGVVVFSILGYRELKTGLPADKVS-SGPGLAFMAFSDAILLMKGSPFWAVMFFLMLILLGIDSEFGVLEATITPFYDSGVVKMRK----EVFTAIFAFVMFLIGLCLVAGNGFYIFQIFDDFSVS-LPLLFIAFFQCIGVTWIYGSDNFANDIEYMTGSRPNIFWMLCWKYISPVALLVVFITNINTLSKDTAKYAVYTGCPSDPLHYQHAGTSEWLTKVEYPPWGQFLIVLVVGVSFLPILIYLFLDLYRRPGAWKAGIKKRFFTSWHEYLPDP 1785
            RG W +K EF+L+  G  +GLGN+WRFPYLC +NGGGAF IPY IF  + G+P+FF+E A+GQ     SV AW K+ P  +GIG + V + +++ +YYI++L+W ++Y   SFTS+LPW       N       LN    + G  T  P      ++F+      P   ++ +RVL ++SGI D G  L   L  CL+LAW+I Y C+ KG+KS+GKVVYFTA FPY++L+I   RGVTL  A  GI  +  PD  +L+DPQ+WMDA TQIFF+ ++  G L A  SY    NNC +D   + F+N  TS  AG VVFSILG+   + G+P  +V+ SGPGLAF+AF  A+ +M  S  W+ +FF+MLI LG+DS+F  +E  +T   D    ++RK    E+     A + +LIGL LV   G YIFQ+FD ++ S + LLF++ F+ + ++W+YG+D F ++IE M G RP     + W +++P   L  F+    +LSK T            PL Y +           YPPWG  +   +   S + + +++ + L +  G ++  +++    +    LP P
Sbjct:   36 RGQWTNKMEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFFIPYFIFFFVCGIPVFFLEVALGQYTSQGSVTAWRKICPLFQGIGLASVVIESYLNVYYIIILAWALFYLFSSFTSELPWTTCNNFWNTEHCTDFLN----HSGAGTVTP-----FENFT-----SPVMEFWERRVLGITSGIHDLG-SLRWELALCLLLAWVICYFCIWKGVKSTGKVVYFTATFPYLMLVILLIRGVTLPGAYQGIIYYLKPDLFRLKDPQVWMDAGTQIFFSFAICQGCLTALGSYNKYHNNCYKDCIALCFLNSATSFVAGFVVFSILGFMSQEQGVPISEVAESGPGLAFIAFPKAVTMMPLSQLWSCLFFIMLIFLGLDSQFVCVECLVTASIDMFPRQLRKSGRRELLILTIAVMCYLIGLFLVTEGGMYIFQLFDYYASSGICLLFLSLFEVVCISWVYGADRFYDNIEDMIGYRPWPLVKISWLFLTPGLCLATFLF---SLSKYT------------PLKYNNVYV--------YPPWGYSIGWFLALSSMVCVPLFVVITLLKTRGPFRKRLRQ--LITPDSSLPQP 582
The following BLAST results are available for this feature:
BLAST of TCONS_00014195 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S6A127.505e-11939.69Sodium- and chloride-dependent betaine transporter... [more]
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