XLOC_007321 (gene) - C. hemisphaerica

Overview
NameXLOC_007321
Unique NameXLOC_007321
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000162:104867..109062+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007321 ID=XLOC_007321|Name=XLOC_007321|organism=Clytia hemisphaerica|type=gene|length=4196bp|location=Sequence derived from alignment at sc0000162:104867..109062+ (Clytia hemisphaerica)
TGTAAACTCAGTGCAGTGGACGTGTTGGAAATGAGAGACCCATTAGAAAG
CTAAGGAAATGGTCGACtcatgtttttcatatttttcattgtaGGTCAAC
TGACGGTTCTGGCATGTTCAATTGGAGGTTTAAATACAATTTCAAATATC
ACCAAGCTAAAAGACAAATCGTCCGCAAAGAAACGGTCAGTTGAAAGTTC
CTTTGTTCGTTTTTTCATTTAGGTCTGCTCGTCTTCTTTTAATCAAAGGG
TCTGCGTTATCAATATATTGCCAATTGGTAAATACTAATGGTAGACGAAT
AGACTCTCATCTTTATCAGTTTCTCGGTGCAACCTGATATAAAAGTTCGA
ATaatgttggaaaattttcaaaattttaataaacggggggaccaaATTTC
CGGAGGGGttagaaattgtacttctgaaaacccaaaataaggtaaatata
ggctaaaatcaggttaTTTAGAGctaaataaggggccttctctttggcag
ctgaaaatattcttgaaaatttataaacaGGGGGTGTcctaattttcgaa
aaattaacaagcagggggcccgtttatttggaacctaagagaaGCTTTTa
gtactttaagggcagaaactttcgtgggcagaaactttcgcactttcgcg
tttttcgcgattttgatcctttttcgagaaagtttctgccaggtaagaaa
ttaaacctgaaaaacgcgaaagtttttttcgcgaaaaataaactttccta
ctcagttttgcactgtttgctaaatttttgcgtgtttttgttaccaaaaa
aggtaaattttatatgaattcgcgaaagttctatctgtaaaatttcggct
aaaaccataattcgcgaaacttaaattcgctaaatttcgcgactttttga
cttcgcgaaactttctgcccgtgaaactttctgcccttaaagtatcaGTA
CTTATTTCAATGTTTATTCTTTTGCAGAACGTAGCATTTGAAAAGACAGC
TCTATATTATCGACCGGAGCTCGTGATTGAATGTTTAGAGAACGACCTTT
TCTCACACGATGTTCTAGGTATGTATTGTACGGGATTCgaagatttgaaa
actttttaaaaaaaagaaaagtttaaatTACATAGACATAGTTGTGAAGC
TACGAAGAGTTATTATTGTTAATACTTTCTACTCACAATACTTTACCGGT
AGATAATTCGTTGGTGAAAAATATTCGCCGGTTAAAAATATTCGTCTGtc
aaaaattccgtcaccgagcgatttttttgtcattttctacCGAAGAATTT
CTTACCGAAAAAGgtatatttttaataaaatttctaaccGTAGGTGAGCG
TCGAATCAACTTGCTGAAAGTCCCACCATATTTCGGCAAACCCTGGGGAT
GGTCAATGGGTAAATATAAAGAACTAGCGAAGAACGAGAATAGGACACCA
TCTTTGTTCAACTGCTCCACCATTCGTGGATGGTGGCCCTTGGAAACGGA
TGACCCTGAACGAGAAGACGGTGATGGTGTAAGTGCCCAGCTGGtgcaca
atgttgtttcaacgttcatcgaATATTCACAACGTCAATATAACGTtgga
tgaacattgaaacaacgtcttgtgccagctgggtgggATTTTGAACGTGT
CTCTTACAAGATATTTTACACGAATGGCTAAAAGAAATCCAGTCATAAGA
TATATGTGGGCCCAGTCCATTCGCTTTATGCGAGCGCTATTTTATGTTAT
CACGTGTGAACCATGTAAGCATCATTTGACTAATCTCCATTGTAGTGGTT
TCCACATGGAATATCAGAAAAGTGCTCACTTAAGGCGAATGGACTTTAGG
CTTGAAAAAGGGAATATGTAAAACTTTAAAGGAGTGGGCGGTCAAGACTT
ATCAATGAGAATAAGTGAATTCAatatattgatttgattttcttttgtag
GGTCGAGTTGAATTGGAATTGGAGTTGTTAACGAAAGAAGAAGCGGACGA
GAACCCTGTCGGTGAACAACGAAATGAACCTCATGCTCTCTCAAAACCTA
AGTAAGTTCGCTAATCACTAGCTCTGCTGGTTTAACTCACCAAGTGCCTT
AACACACTGTTGATTTGGCTCTTTCTAGGAGGTGTTAGATTTGGGGAAGC
CTGAGAGTAATATTTTGCGTTGTCACATCATCTCAACACCGGACGATATG
TTACATGACATGGAATCTCGTTTATGACATTAATTGGTTTGTTGATCATC
CAAGTTGATCGTTAAAATTCTTCTAGTTGACTTTTTGACTTATTGGTTAA
CTTACCGTTGTTGGATATTGTTGATTGTAGGATTATCCCTTCATAAAGGA
AATATAAATTGTAGATCTGATGAGTACCTGTAAATAATTCCAAATCAGAA
GCTCGAAATCACAATTTTCTCCTTCCTTTTTTAGACGCCCTCAAGAGAGT
ATGCGGTTATTGATCGGCCCTCTTCGAACACTCAGAATTTTCGTCAATTC
ACATCGTGGTCTTATTTGTAAAGTAGTCTTCTTGTTGCTGCTGGTTATTC
TGATGCTCCTCTTTCTATACGCCATGCCTGTGAGTAGACTTCTGTgagga
ttttgaattttatgagGATAGACATCCTTGTCTCTTTGAGGAAGCTCAAT
TCTGAATGGGAATAGAAACCACCTGTTTTAATGGTAGGGATTTCAAATTC
TATTCTACTTGTTATTGATGTTCAAAAATCTATCCTTTGAGAGGGGTCCC
AGCCGGTCTGTGGCACGGGttgtataagaaaatttttcgccagaaattga
aattttttacgTACCGAAATTCTCTCTGTCATTTCAACATGACTATTTGC
CTAATTTAGAGTGAATTTTCTTCGCCTTTTGATTTCATCAGATATTTCAT
TGATCAATTTTATTATTGGGTATGTGATGTGTGTCAATATAAGTAAGGAA
TCTCGAGTAGCATTTTGTCCATTCCACTTGCGGATGGAGAAGGTTTcgta
atttttctttctaataTCGAGTTCGATGTCCTGTTTTATCTATTCCCCGA
ATGCGTGCATTACCTCAAATTTCTCTTCATTTTCGTAATCATAGGGAGCT
GCTGTCCAAAAGATGTTTGGTGCTCGTTGAGGTACTTGATAAGAAAATGT
CGAAATATAGAATGGATGAAACTAAAAGAACTTAATAAATGGATCATTCT
TTCTCTTGGATTTCCTCTACAAGTTACTCAGTCCaacaaaaatacaaaca
aacaaattgtTTCCCATGGAAATCGAGATACGAGAACATTTCTGAAACAT
TACTTCCTTTATCTTAACTCATCCTTTGGTTGAGTTATGTAACGCCAATT
TTCACGTATTATGAATGTCGTTTCAACATTCATTCCTGAACATTGGGTAG
ATATCTCGACTTTCAATCTTGTAGCTTGTTAAGAGCGGAAATTAAAGTAA
TTAGGGTAGGAGATTGCGTTTTAATTGGCCACCTAGAGTTGTTTTTGTAA
TTCGTAAATGCATTCTATTTATTCTTCATTATAGATAAATGTCGGGTTTT
ATTGCAAGTATTTATCTCGATTAGTGCATGAATTTAATCAAGGCTTTGTT
ATGGTAATTTGTTGACCAAGCATCAAAGAGCAAAAAGAAAATGTACTAAC
GAGACATCAGACTGTGTCAATATAGTTCCCTGTAACTTATCAATCATGCC
TCCTCCCCCTGTACTGATCCTTACAAAGACTACCTCAGCTGAGCTCAGTT
GATCTATGTCATTTTGACGCTCTTTGTCAATTATGGGGTGTAATCTAACA
AAACGGcgcaaattttaaaagaatttaaaaccaATTAGATTTTTGATGAA
CGAACGAatgtatatttttgaattttttcctttaaacCTACATACTAAAA
TACTATTTATAAATTATTTACAAATGAAATgtcatatatatatattttga
atGCATTGTTTATTGTATATTTTATATGATTTTTACGGGGAAATCACGAG
TCATTAAACCAACCAGGATTCGCTTccagtaaaaaaataatttatatagg
ggtcattttgaaatagaaagttttttaaaaatatttttgtactaTATCTT
GAGGGTTGATTTGGTGTTGGACGTGTGTATATGTATTTGGATGACCATAT
ATTGACcctaaaaaatgaaacaaaataattgaatatGAATTATTAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00013075TCONS_00013075Clytia hemisphaericatranscript
TCONS_00013076TCONS_00013076Clytia hemisphaericatranscript
TCONS_00013077TCONS_00013077Clytia hemisphaericatranscript
TCONS_00013078TCONS_00013078Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00013075-proteinTCONS_00013075-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000162supercontigsc0000162:104867..109062 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.75	1.45	0.6	0.55	2.19	1.49	18.43	19.71	11.12	10.22	33.42	7.49	1.51	1.55	2.01	2.46	1.87	1.94	2.56	2.67	2.04	1.49	0.96	1.4	2.14	1.82	0.85	0.94	0.51	0.84