XLOC_006974 (gene) - C. hemisphaerica

Overview
NameXLOC_006974
Unique NameXLOC_006974
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000144:329390..333502+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006974 ID=XLOC_006974|Name=XLOC_006974|organism=Clytia hemisphaerica|type=gene|length=4113bp|location=Sequence derived from alignment at sc0000144:329390..333502+ (Clytia hemisphaerica)
ATAAGGGTTGGATGTTCAGCCTTGAGGGCTACGATTGGATTTTAAATCTA
GGTTGAGAAAACCATGgaattctttttctaaatatcTTTTGTTAGGTGCT
TGGTTGTATTTCGTATATGATCGCCTTCTGGAAGAAAAATATTCTCATTA
ATGAATGATTTGCTTGCAAATACTTTCCCTTGTGTTTAAAAAGTAACAGC
CACTGAAAATAAACCCCCTTTTCGCCTCCCCTTTTAGGGGTTGTAACTTC
TGATGCAAGCAATGAGATAGATAATTGTATTTCGTTTGGGATCGACAAGc
tctttatttttcagaatGGGAATTTTTCAGGGGAAAATATCCAAATATTT
TGTGCACGCTTCCCTAGCCTATTTACTACAAAGATATTGTACTTCATAAG
GATCTTTCAAAACACCGAATTTGAAAGTTTAAACAAATTTTGGTCGCCCA
CCTGCTTTCAATAATGGGGCTAAAACTACTATTGTTTTAAGCTAAGACAT
CAAGTGGAGACTCTCAAAATTACAGAGTACCTTTCCTACAGTGAATGAAA
ATTAAGTACTTTTGGATTATACTTTGGTATTTATCTCGAGTTTTGGCAGT
GTTCATGATGCAGGGTTACCCTTTATTGTATTTCTctcctcatttcactt
tataacaccctcttctcacagacgcactgggaccccttcccactggaaaa
atttgccaaaaaaagtcATCCCCAGTGGAAagttatactctaatttttgc
tcccgttgaaaataattctgactgcaaaatattgtgctaatTTTTCCATC
TTCACTGAATTTTCTagcttgaaaacaatggaattcaaatttcagccaaa
agaAAGATGGGAATATCAAACCCCATCTGGTTTTGGTCGGTTATTTTTAC
TCcaattggctgaaaaaatcctaccggctCTGCGAGTTGGGGGTGCTTTG
GGAAGGGAAAAATGCTAGTTGTGGTCCAAATAACGTTAAGTCTAAATCAA
CAGTTCAGTTTAATTTCCAAAAACTTTAATGATTGTGTTTGGAAAGAGCA
ACCTAAGTTGAAAATCTTATTTGAGAATATCATCAAGGCTATTTTTACTT
TCAATTACGTTTAATTCATGtataaaatttcaagttttttcatcTTAAGA
AAATTCACATAGGGGtattaaaaagtattaaaaacGTTAAGATTTCTCAA
TACTTTACACCTTGAATGTTGTGACTTTTTCTCTGGTTTTTGATACTGGG
CTAGTGCAGCCAGCGTTTGAAAAATTTCCGCGGAAAGAAGAACGTACTTG
GGAAAAGTGGATGTGGCGTATGTTCCTTAAGagtggatttcatttttttt
aatctctCTTAAGATTCATCCTTTAAACAAATTCGCCCGGGTGATCGGTG
ATTTGGTTCGCACACAAAACTATCTACCCGGCCACTGGAATATTATCACA
GAGTGTTCAGGCTCATGAATATTTCATGTCCTATAGGAAAAAGATTAATT
CTAAAACAGATGATAGTTAAATATCCCTAGCATTACCATACGCAGCTCTA
ATGATTCTTGTTTCCAGCACTAGCATACTAAATACTCCAAGATGGCGGAC
AACGGAGAGCAAGGAGCAGCTGCTAGCACTCAACCAAAGAAAGAAGAAGG
AGGAAGAATCAACACTAATTTCATTAAAAGCCCTCTTGGTATCGTTCTTA
TCATCAACTTTGTAAGTATTTAATAAAGTACACTCATTTTGTTAAAAACA
TCGCCCGAAAAAATTGTACCAGAttaacaaaaatgaagaaattattcaaa
tgaatctcaaatttcaaatttcaataccTAATGATTCTGTTCacgttttt
agattttttctttcttggcTTTCTGTATGATGTCTGGATTTCTTGGTGAT
ACCGGATTACGAACAGGCCATTTTGGATTCTTCATGTATGCTGTGACTCA
CACATGGGTGGCTCTGCTAATCATTTTCATCTTGAAATTGATCAAGATTC
ACACCTTGGTAGATTGCATTAGTTGGGAATTGACTGTAAGTTTTAAGTTT
CGATAATTCATATTATTTCTGTGATCAAGACATAAtaacaaaatgtcaaa
attatttccaatattaaaaagaaacaatatTGGTACAAGCCGGGGATGTC
ACTGGTTAGGATCATTTTTCTAAGGTCTGGAAACATCTGTCATGACATGG
AATTCAAGCGACTGGTGTCTGTCACCCACCAAAGGTCTGCCCCTCTACCC
ATGCGATGTCATTTATTGTCTCTTCCAAATAGAATTCCTCTGTTTATTCA
AATCCCAAATTTTTAGTGAGACAGTTATGCGGGAAAGACCCGACATAAAa
ccttttgtaaattttctttttttctatttatagtTTGCCATCAACACCCT
GATCATGACCGTTATTTTGTTGATCGGATCAGCTGTTGTAGCGCAACGAG
CTGCTTACTACAGTGATTATCATTGTGATTACATCAACTGTCATCTTATC
GGTGCATGCGCTGTAAGTTTCCGATTGAATTTTTGCTTTGTGTACTTCAA
ACTGGTTAAAACCTCGAAAAGATTCGACCTCTCTTCAGCATAATGAGCCT
TTTTGTCCTCCTCCTAACGGCCGATATTTTTGGGGCGCCGAAAGACACAA
TTTTACTAATTTCAGCGCCCCTTTGCTGTTTTACTCCTAAAAATAAGTAG
TATTCAGccaaacaaagaaaatataCCCAAAAAATTTTCGTGCTTGCTGC
GCTCACGTGATTAAACCATGCTACTGATACCAATGACGTAAAAATCATGT
ACTAAAACACGAATCCTATGGAATAGGGAAATTTAGCTTTGAATCAGTTT
GGGAACGGATGAATAGTATTTTCAGATAACTAATGAACAGGAGAGGAACC
GGATGAACAATTTTAAACACACTTTTAGACACTACCAACTAAGCTAAATC
GTTGTTGACGATCCActagttttctttttaaaacgaACCCAATTTTTTTA
CAAGTCATTGCCTCAACTTTTCAGGCAAtgtagaaaatgaaaactttaat
CATCCTCTGTATGTATATTACctgattttttcagttctttGGCTTTGCAG
CAATGCTTGGATGCGCAATTCAAACTTTCTTCCACTACAAAGAATGGAGA
GCATAATTTCAAGAAGACTCATCAAGCAAGCTATTTTTATAATGACAACG
GGGACAATAATGATTTCTTTTgtaatgtttaatattttttctgtatttta
aGAACTTTTAAGTAATGATTCTTTATAGAGCCAATTTGTGTAATGTGAAT
TCCaaactgtttttatttgaaaaagaattaataattcgattaaaaattta
agatttcttTGACTCCATTAAGTAGTCAATCCATTAAGATACATTGCTGT
AATTTAAGCGCGGGAAGAAGAGATATGTTTGGAACTCGGAGTATTGGTTG
TGATTGATCTATATATTGGACGAGGAAAATGATCAGAGGTTTTGATTGAT
CGATATAACACAGAGTTccatattgaaaaaaagaaaaatgacaaGACTAA
AATAGGAAATTTTGTCTAGACCAATCGATAttcgaaaaattgattgaatt
aTAACAATAGATGCTATATTATGAATTTTGAACTCAGAAAAACTGGCCTA
GATGAATATCACACATACAAAAGGAAAAAGGCAAAAAGAGAAAGCATAGG
CACAAAAATGCGCATGCATTAAAGTTCAAATCCATAGTTGCTCCTAATGG
AATGGTTGTAAATTGAAGGTAAAATGCATGATGCAACTATGCTAGCAAGG
TCGAATTTGCTAGATCAGCTGGTTTAGCATTTGAGAGCACCTGACGGGAC
AATCTTATGTATTTATGGTGACCCTGCTTATCCTCTTCGTCACCAATCGA
ATGGCTGCTTTCAACGGCAATCGAGTAAATAATCAGCAAAAAACTGTGGA
ATCAACAAATGAGTTCAGTTAGAGTGGCCGTTGAATGAGTTTTTGGTGAC
ATGAtcaaatttattaattttcatgAACAGCTTAAGATAAAGCTTAGCCG
TGTGGAAAAATGTGCATAGTTTGTGCCTTGGTTCAGAATGCCCGTTCTTG
TTTTTATGGATCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012423TCONS_00012423Clytia hemisphaericatranscript
TCONS_00012424TCONS_00012424Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00012423-proteinTCONS_00012423-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000144supercontigsc0000144:329390..333502 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PLLPplasmolipin Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0.02	0	0	0.02	0.03	0.11	0	152.55	197.91	0.11	0.15	0.2	0.06	303.04	180.61	0.49	0.45	0.46	0.75	0.22	0.36	0.03	0.16	0.06	0.03