XLOC_006903 (gene) - C. hemisphaerica

Overview
NameXLOC_006903
Unique NameXLOC_006903
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000143:167209..171587+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006903 ID=XLOC_006903|Name=XLOC_006903|organism=Clytia hemisphaerica|type=gene|length=4379bp|location=Sequence derived from alignment at sc0000143:167209..171587+ (Clytia hemisphaerica)
TGTCACAtaccatttttatttgagaattaacttcaaatcaatttctTTCT AATATTTTTCTTACACAAAATTGCTTGGAATATATACAAAAATCTcaata aaactaaaataaaaagttgtCATTTTTCTCAAACAACACATTCATCTTTG CCTTGCTTTATGTCTTGGGTGTTCTTTACAAATGACGTGTAACCTTCCCC TTCTCCAAACAAAACGACAAGCTGCACAACGTAACTTCAGTGATGATTTC ACTTTATAAGTCCTCATATTGTTAAGAACTGCATAGGACAAACCATTGTG GTATGTTTGTGCAACAAGTGATCGAAAGAATccaaacattttgattttta ttattCAAGTGTTTTTCAAGTTTAGctgaaaaataacaaatttttgtgAA TGCAAATCAAAGAAATAATTTTACAGTTCAATATTCCAATAAGCCCCTTT ATAAAGGAGAaacttaaaaaacttaaaaactagGTTATAACGCTCATCGT GTTAATTCATTTTGTCAAAGCCAAAAATCAAAGTATTTATACCTAAATTT TTAAACACACTTTTTCAATTTGatcaaataaaatttccaacatTACTCAA ACTTTCAAAGGGTTGAAAAGAAAGGACATTGAGTCTtagtcaaattttct ttctaaaaaaacaTCCCTAATGCCATCCATTGTTAATCAGACTTCATCTT CTTTTAATAACATATTAGGAATCCCTTTTGTGATGGGAAATTTTCGACCA GTCTCTGGGCAAATAAGGTTGCCCTCCATGATCTCAATCTCTAACAAAAC ATGATGCATCTCTTTCAGAAAGTCCTCATTTTCACAAAGTTCTGTTTCTT TCCCTGTAATATCTAACGGTAAATTTGTTCCATGTCCGAGCGCTTGAGCA GCTTCAACTAACGCTTTCCATTCCAATTTTTGCATCATTCTTTCCAGGAA TTCCGGATTGTAGTCAGCTTCTTTAAGTTGAACATCCTCAGCCTCAATTT TGAACGGAAATCCATCCTTGACACCTTTAATTTTACAGGCTAACATGTTA TGAGTTATAAGCTTCATTgttggttttttattttttaccttaAACTTTTA ATCAAATGAAAACCTGAATCAAACATAAAGAaaatacaaatgtcaaaaaa tcatCTAATATTCTCACATCTATCTAAAATCAACCAGAGTTAGAACAGTT GCTAGACTTGGGAGGCAAATTAAAGATAACTAATAATCAAgatattattt ttaataaaGATGACAAGTTTGCTCTGAGGCTCATTTTGGTACCCGTGAAC TCCCGGTCCCTTGGGGTTGATGTAACATCCAACCCAATAAGGGTGCATAC CATTtagccaaaaacccaaaaaagtgaaacagaggGTTTAGCGAACGCAT TGATTCATTTAAAGGTTTACCTAAACAGACGATCAAAGCCAACAGtcttt tttgtgtgttttctTTGTTCGCTAAACCGAGGGTTTAGCAAACAAACTGc accatttgattttttgttttgctaaacCATTATTCTAACCAAGCACTACA CTTTGTTTACGCTGGTTCGCTAAGCGCACGCATGCATAAGCCCTAAGACT GAAGGTTTCTTCAGctgggctaccattttgaaattcgttGCTGTGACTTC AGGCAAGATCATAGAAATCGAATTAGCAATGTAACAGCTTCTTTGTTtag gtaaacaaacccaaaccatttgcagtttagtgaaacagtttcagtttttt ggttttgaacattaaaaggTATGCAACCTAAGTTGTTTCCtgtggaaaat ttttctacaagGGTTCATAATATTTGTAGTAGGTGTTACTGTCGTCCAGT CCTCAGATTAGGCAACAGTAAGGGAGTCAAGTGGTTGAGTTTTCATACGC GTGTATTCTGTGAATAACGGCTATAAAGCAAATATAGAACACGAGTTTAA ACAAACTATATACAAAGGTCTAGGTTAAAGTACAAGGAAGTCGAGAAATA TCGAGaaataagatataaaatatactTACTAAAAACACTTTCCACGTACA CTAACATACACTGACAGCAATATTAACACACTTTTTCAAGCACGGAAATT CACTGTACATTTAACAAGAAACATACAATAAACTGTCTCAAGGGACTTAC AAGACATTACAATACACAAGAGACATTATTATTCCTAAGATAATTACAAA GTACAAAGCTATTAGCAAACAATAAAGTATATAAACCTAATTAACTAGAA ATAAGCACAAAGACTTTACAATAAATATAAACTGCAGCTCTGCGAAGTTA CAGTAGGGGGGAATTAGTCTCAGTTTTGGGTTTATAGGGGTTTTACAACT TTATAAATGTTTTATGCATAGGATTTATTGTGCTTTATGCACGGTACAGA TGCAGTCTAAAGGATGTGAATCTACAATCTTACTTTCACGCTTCAGtatc agttaaaaaaagttGGGAAAGGAAGGCTGGAATAAATCTGTTTTGGAATT TAATAAAGGTCTAGCATGATAAGACATAAGATATTTAAGATgttgttttt cgaaatttagtaCCTTTAGTATAAAAAAAACCACAGCACTATTCCCTAAA CAAGAAGAAATCTAGAACATAAGAGTCCTTAAAAACCCtacttgaaattt tatttaaagCTTCATCCTTGTTTGATATTGCACTTTTTATGTCTTTTAGT AACGTTCATGTGTTCAGTTATTATTTAGTCATCCATGTCCTGAAAACCCA AGACAATCACACTTCGTTTTTTACTTATAATAGAATTCTTTAGCTGTGTT CTCCACTGTTTTTGACCAAAAGTTAAGAGATTGCttatattgtttgaaac atAAACGCTTTTCAACTTGTTCTGGGTGGAGAAGAAAGAATTTTGCCCTT CTCCATACTTCTCTATTGAGGTCATCTGCAAAGNAAACATAAACGCTTTT CAACTTGTTCTGGGTGGAGAAGAAAGAATTTTGCCCTTCTCCATACTTCT CTATCAAGGTCATCTGCAAAGATTTCACATCTCTCATTGGAAGTTTGAAG CTTGTGTGAAGTGACAGATAaagtttcataattttttgaACGACCATAGA AATCAAATCTTTCGAAATTCTTCTTCATCAGAAAAAGCTTTTCATTGCca atagaaaaatatttcacttcCCCAACTCTTATTGAAGAAATTACCCTTTT GTACCATTTTGAGTAGGAGGTACTTAATTCTAAATGAGAATGAATCAGAT TCTCGACTCCCCAAATGACAACATCATCAGTTGACTTGAAGGTGGGTTGT TTCGTTGTTTCAGTTTTTGATCCAACTAAATCTGTTTGTTCTTTCAACTT TGCTATTGCTGAGGCATGTTCTGCTAGCTTGGAGTTTGTCTCAAATTTAT AATGACACAACTCattgttaaatttttcttttaactgTTTCTCCATTTCT TCTACTATTTTCCCCACAACATCATCACTTTGCacagatttttccaattt tgattGAGATCCTGGTTCTTCAGCATTCTTTCTTACTTTTTCTATTTCAA TCTCATGCTTCAGCCTTTCAATTTCTCTCTCAAGCTCCAAAAGTTGCATT TTATGTTCCAGCTTCAAGATCTTTATTTCTTTCTCAGTGGTCTTCTTTCT GTATGAGATTTTCAGCTTTCAGTTTTTGTATTTCATCCATGTTGACTGAA ATGTGCCCTTCAGCACTGTGTGCATTGGCCATTTAACTAATATATGTCTG ATGTGCCAATGTGATGAGCTAAGTTAACTAATACatttattgaaaatata ttcttttCGTCTTTTTATctggaaatttagaaatacgacaAAAAGAgagt caaatttaaaatttgtttcctatctagggCGACATCAATTATATGTTCTG TTCCCATCGCCAGACCGACTCACCTTCAAAACAGTGTCTAATTTTCTGTC TCTACTATCTGTCGCAGTGTCGGAGGACCCAATTTCTGTATAAATTtggt ctaaattttcgccaaattccgccactctgTCCGGAAAAAGAGTCCATTCC GCTCCTCCGctaaccatgaaaccccccatCAATGGCAAAAAGATCTATTC CATTTTAGTCgctttctcaaagaaaatggctctttaaaagattttctata gCTATATAGAAAAACACAACTGAAAATGGTATAACATAATCAGAAAAATA CACGAACTGTCAACGCAGTCAGCTTCGTTAATTTAGTTTGCATGTATCTA CTTGCATCCATGTCCATGAATCATGAATACCTAGTCGTTTTGATTGATGG TGGGTCTATAAACTCACTCCACGTTGAAAATTTGACTTCGTTTCAAAACT TCGCTACTCTGTTAccattttgaaagaag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012256TCONS_00012256Clytia hemisphaericatranscript
TCONS_00012257TCONS_00012257Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000143supercontigsc0000143:167209..171587 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
27.49 25 26.62 25.81 16.5 11.55 14.71 15.12 15.42 11.98 14.81 15.25 16.11 17.65 17.87 15.65 16.65 16.99 9.62 9.27 16.27 15.29 22.35 19.36 14.43 14.54 13.79 14.88 11.12 11.28