XLOC_006776 (gene) - C. hemisphaerica

Overview
NameXLOC_006776
Unique NameXLOC_006776
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000136:436709..441562-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006776 ID=XLOC_006776|Name=XLOC_006776|organism=Clytia hemisphaerica|type=gene|length=4854bp|location=Sequence derived from alignment at sc0000136:436709..441562- (Clytia hemisphaerica)
CCTTAGCTGGGCAGACAACCAATATTGTAAGTAATTTTTTTTCCTATACT TCTTTTTCGTATCAATCGAATGCTGGATTTTGGGAGTAATGAAACCATGA ATTAGAGGTTGGGCGATCACTAGGCTGCAAAAATTACTATTTTAGCCTAT GTTTTCCATACACCACTTCTTTGTCTAGTGGCGCATTGGTTATGGTAGTA GAATAATATCTTCCAAGGCTTTTAACAGTAGCGAGTTTTTATATCTACAC TTTTGAGGACGGCAGAGTGACTGTAGCGATTTGGAATAGTTATAACCAGT GGAATTGAGGAGGGTAAACGTGTTTATTTACCATCGTCTTCAGTCAGTCA GGATCTAGTCAAATCAGAAGTTAATCATCTCTGTTGCAGAATAACACACA TACATAAAACTCGCTCGCCGTGTGAAGAGAATCAAGATGATTATCTTTTA AGTCACTCCAATGCTCTGAAAAATATAGAATGTTACTCCAGCCTCAGCCC TTATCTTACTTCTTTGCACTTAATTTCGCTTAGTGAAGGGCACTCCAAAT GAATTTTGTTTACATTTTCCATTGGGTGGTCTTGCAATATTTATTTCAAG TACTTTCAAAACAAATGCGTCAGTAGCTAGTACCAAATTCTCACAAGATC TTTCAACAAAGGAGCTAATTCAATCTTGTGAAAGTGCAAAATATTGACTT TGATAGTTCAATAAAACTTCTATTGAAGCTAAATTTTGGCATCTCTAGCC TTTAATGGTTCCATGTGAACTCTCTAAAGAATTTCATTAAAGAATCAACG TGAGAAGAATGATAAATGACTGTTAGGTACTGGCTTGATCGTCAGTAGCA GCATTTCACTTCTGCGAACGTTTGTTTTCTTTTTTGACATGTGAGAATCT AAACAACAACAAAATGTTGGATATTTGGATATCATGCGGTGATAGTGTGT GTTTTATAGTGGCTTTCGTTCTCTTTATCGATTTCAATTTTTTTGGTGAG ATTTGATTTTAGTGTTTTCGTCTCTGTGTGTATGTAGTCGATGTTTTTAC CAGTGTAAGATTTAGTCTATTGTTATAGGAATGTTTAACAATCAATTATC CTACTTTTTTGATTTTGATTTTGCATTGTCTTTTAAGAGAAATCAACTAG TTTTCAAATTTTCGGTTCAGGTTTGATTGAAGTTATCATTCTGTCTAGTT GAGTCGGGAGTTCCCATAGTAGTAATTGTATGGGGTTGAATTTCAATGCG GAGCAAAGAAACTAGTGATACCTTTTTACTCAAGCAGCGTATAGTAATTT TTCAGATATTGATCGAGAGACTTAGGGATCTAAAGGAGACAAAAAGAAGG GAAAAAACTCTAAAATTTTCTTAAATTTCATAACTTCTTCTTTTTTTCGT CTACCAAAGGTAAATACAATAATTCAAAGAAACAAAGATGATGAAGCTCG CATTCATCTCAATGGTGTTCCTAACAGCCAATTTCCAAACAGCTGATGGG TTGTGTTTTAAGGACATCGATCGTTGTTTACAAGATACAAAATCATGTGG CAAAATGATGAAACAGTAAGTATACCCCAGCTGGCACAATACGTTGTTTC AACGTTCTTCTAACGTTATATGGACATTGTGAACGTTAGACAAACGCTAA AACAATGTTGTGTGCCAGCTGGGACAGTTGGCCCTCTCTACTTCGATTAT CAAGGGACAGAGATTCTTATTCGAATAAGAGAAAGATTTGAATTATAGTC GAAGTTATATAACATTTTCAACAGAACAGCCCGACGTGTTAGATCGAATT ATAGAAAAATTTGAATATTCTACAGAGGTTTGAATTTGGGAGAGCTGATT TTATTCATATTTGAGAGAGCTGATTTTATTTGTATTAAAAAGCGAAATAT CTTTTTAAAAAGTACATTGTACTCCGAAGTTCAGCCTTTAGTTGTTTACT TATAAAAATTAGCCTACAGTTGAGGTTCTCTAATTCGATTTCTAAGAGGA GTTGATTTTTATCCAATAAGGGAGTAGATGGAGTAGAAAAACGTGGCTTG TGAGTATTTCTTGTTTGTGACTCTCAATATCATCGAATAATAGCCGAATT AGAAACGTCGAATTAGAGAGCGTAAACTGTATTTTGTATCACTGAGCTTT ATATAAACCTTGGAGGCAGTTTCTCTATCTTAAATGCACTAATCACAGTT TTTCAAGAAGAAACATATCCTCATCGAGTACTATTATACTCCTTTAAAAA GAAAAATGTTGCCATAAAGCCAAATAAATATTCAGTGCAGTGTTCTAATG GAGATGAAATTAGAGGATGTTTTTCTCACCATAGTCAGTATAAAAACACT GGTCTGGAAGGCCTTTGTCTCTTTTTATTGTTAAAAGACAGAGCTTATGT ACCAAAATCGATTTATTTTGCAAACTTTTTGATCATGTGATTAGAAAATA GACCAATCCCATACGAGGAGGTTTTGGTAACGTGATAAAAAAGTATGCAA ATCGCAACTTGTCTTTTGTTTGTAATAAAAGAAAATTGAACAAAACAATA GATTGTCAGACCAGTGTTTTTATAATGACTATGCTCTCACCGTGGATGAT TCGTTAAACGATTTTACCAGGGAAGGAGAGTGGCCAACCGGATCTGTTTA AACACCCCTGTCTCACAGCCCCGGTGGAACTTTTTTCCTAAGTAGAGATA AAAATCCCTATCGAAATTCAAATATAAATTCCATTGTTCCAAGGTTAAAA AATCCAGTGGGGATGGTTTTGGAGTGCAGCTGATGGAACATTGATTTTTG GATGGGGATTAGATCAAAGTCAATTTCCCGTCCTACCGTGGACGAACTTT TTGCAAGATTTTAGAATGTTCAATTAATAGCTTCTACTTGTATCATGAAA ATTAATATTATTTTTATTTATTTAGATTATTTCTAGGTAGCCAACCAATT AATATTCCTTTGTATTTACAGTGTCCAGAACAAGTGTCAAAAACTGGTCA GTTTTGGTTGGTATCCTTTGGACACACTTTTCATTCAATGCACTTCAAAA TGTCGCAAAGCATTGCGCAGGATCACCAAGAAGCATCCAGAATTGCTGAG ATGTAAATGTGAAAGCAGTAATTGCATGGTGGTTAAACAACGGGTTAAAC AATGCATTAATGGTAATAATATTTTAACGGTGAAAGTGTTAAAACTGATA TTAGGGAAAATAGATTTTGTAGGCAACTGTCAAAGTTTTCACCGAAGAGA TAATTTTCTGGTCAAAATCAATGGGGGGTGTTGACTAAGGCTTCCTCTTT GATACCTTGAAGGAAGAAATTTCGATGACTATCGAAGGATTGCACAGATA CCCCATAATTTCGCCTTTTTGGTAATACTTCAAAACTCTCTCCTAATTCT CAACTTTTTGTTACCATTTTCCTTTGAGTAATTCCAAGGCAATCAAAAAC AGTTTGTAAATAAAGAGAAGCAAGTTCGATTAGTTCAATAAATTAATATA AAATATTTTCGATTTCAATTTTTTTACAGCCTCTTGGAGCTCTTAATTAC TTGGATCTTAAATCTAATCTGTGAGTCCTAAATCTCTTTAAATATTCTTA TATCAAAATTTCGGTGTAATCTTCTAAGAGATGTCATACCCGTGTAGCCT ATTCTTATAAAATCAAAGTCTTAGCATTATAATTTGTTCTTATAAAAAAA AACATTTATCTAATTTCAATCCCAGGTCGAATCACAAACAAACACAAAAT GCATCATAAGCCACGTGGTTGCACCAAGCGTTTCCAAAGATGTGACAAAA ACAAGAACTGTCAATCACTTTTTGAAGAAGTTCCACGGAAATGTAATGCT CTACTCAATGATGATAAGTGTACCATTGATTGCGAATCCGCCCTCCGTTC GTTCTTCGATCATCCCTTAGCGAAACGTTTACCGAAATGTGCGTGCGACG GAACGCAATATTTTGAAGGCGTCTGCCTAATGATCAGGCGACGTATCAAA ACCATGTGTAATTCGGAAACGTTCAAAGATTACGTCAAGAAAGAGAAAAT AACTCTACGGGTTGGATGATATGAAACGCAAGCCAAAATTCTTTTTATAT ATTAAAACGATGATTTTATTACTGTTGACTGACTGTCTTTATTTCTTTTC TTTTTTTTTGATTAGCATAATTTTTGATTGAATATCTTGAACTCTGAAAA TGGGTTTTTGCCAAATTAACTCTTCGCAGAATATTCTAATTTTCAGTAAG TGATCTTCTTGTCAAAATCATGATAAGGTTTCCATACTTTTTAACTCGAT GTATAAGAAAGCAATGTAGCCAGAAGCTGTATTGTACATGAATAAAAAAA GCGAAAAATTATAAATGCCTTCTTATAGCCGATCCAAATACTGTTTCGTA GTCAAACAGGAAATCTTATTTTTTCGAATTACAGAAAGCATTTTACGACG TTTTCTCTTTGACGGTTTGAGAGTCGGCTATTTCACAGTCGCAAAGCGTA ATGGGTAATCAGGACCACTGCGCACTAATGATGACTTACTATTGGTCCAC AGTTTCGAAAATGTTTGAAGATTATGCGTCTAGCCAACAGAAAGCCGTTA TGGAGGCGCAAACAGTCCTGATTACCCATGATCCATTTCGACTATGAAAT GGCCTATTGATTCGAATTATAGATACATTTAGATAATAGAAGATCGGATT AGCGAATCAACTGTATTGTCTTTTTGGATATGGAATGAAATACGTAGGCT AGATAAAAATAAAGCACCACCACTTTTAATTTATAGCATTTAACTCAGAT GTACAAAGGCTATACTTTTCTTCGAAAAATATGATGAATTCTGATTAAAT AATA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012060TCONS_00012060Clytia hemisphaericatranscript
TCONS_00012059TCONS_00012059Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00012059-proteinTCONS_00012059-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000136supercontigsc0000136:436709..441562 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.08 0.05 0.35 0.18 0.08 0 0.32 0.2 1.12 1.39 0.46 0.47 17.05 15.98 29.82 46.21 3.94 4.91 0.52 0.46 0.65 0.34 0.31 0.06 0.18 0.46 0.15 0.12 0.24 0.96